Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,003,745	C→A	W145L (TGG→TTG)	rarD ←	putative transporter RarD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,003,745	0	C	A	100.0%	254.1 / NA	72	W145L (TGG→TTG)	rarD	putative transporter RarD
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (40/32);  total (40/32)

CGCCACGGGCAGCAGCCACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCC  >  NC_000913/4003609‑4003879                                                                                                                                         |                                                                                                                                       cgccACGGGCAGCAGCCACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCaaca                                                                                                                                     <  2:730809/140‑1 (MQ=255)  gccACGGGCAGCAGCCACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAg                                                                                                                                    >  1:681059/1‑140 (MQ=255)  gccACGGGCAGCAGCCACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAg                                                                                                                                    <  2:796239/140‑1 (MQ=255)  gccACGGGCAGCAGCCACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAg                                                                                                                                    >  2:578485/1‑140 (MQ=255)   ccACGGGCAGCAGCCACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGc                                                                                                                                   <  1:716627/140‑1 (MQ=255)       gggCAGCAGCCACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGa                                                                                                                               >  1:663783/1‑140 (MQ=255)           agcagcCACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTaa                                                                                                                           <  2:815910/140‑1 (MQ=255)           agcagcCACATGGTTTCGATTAACATCCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTaa                                                                                                                           >  2:374254/1‑140 (MQ=255)                ccACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGc                                                                                                                      <  2:1018665/140‑1 (MQ=255)                ccACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGc                                                                                                                      >  1:993977/1‑140 (MQ=255)                ccACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGc                                                                                                                      >  1:768523/1‑140 (MQ=255)                      ggTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACata                                                                                                                <  1:783600/140‑1 (MQ=255)                          tCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGc                                                                                                            <  2:188434/140‑1 (MQ=255)                            gATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAACTGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCa                                                                                                          <  2:768523/140‑1 (MQ=255)                            gATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCa                                                                                                          <  2:993977/140‑1 (MQ=255)                             aTTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAg                                                                                                         >  1:832981/1‑140 (MQ=255)                                aaCATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAAt                                                                                                      >  1:90334/1‑140 (MQ=255)                                aaCATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAAt                                                                                                      >  1:590023/1‑140 (MQ=255)                                aaCATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAAt                                                                                                      >  1:71414/1‑140 (MQ=255)                                aaCATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAAt                                                                                                      <  2:832981/140‑1 (MQ=255)                                      ccGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCgc                                                                                                <  1:978584/140‑1 (MQ=255)                                                   cAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATc                                                                                   >  1:602277/1‑140 (MQ=255)                                                         cAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCcggcgg                                                                             >  2:404902/1‑140 (MQ=255)                                                           aTCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCgccag                                                                                             >  1:551838/1‑122 (MQ=255)                                                           aTCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCgccag                                                                                             <  2:551838/122‑1 (MQ=255)                                                           aTCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGaa                                                                           >  1:510926/1‑140 (MQ=255)                                                              ttcttGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAAtcg                                                                        >  1:959211/1‑140 (MQ=255)                                                                      tACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCGGGGATTGGATCGGGCGGAATCGCTCGCCGa                                                                >  2:771059/1‑140 (MQ=255)                                                                      tACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGa                                                                >  2:352562/1‑140 (MQ=255)                                                                      tACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGa                                                                >  2:1054856/1‑140 (MQ=255)                                                                       aCCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAg                                                               <  2:959211/140‑1 (MQ=255)                                                                              cGTAGAAGGCAAAACTAAATGCCATTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAg                                                               >  1:224478/1‑133 (MQ=255)                                                                              cGTAGAAGGCAAAACTAAATGCCATTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAg                                                               <  2:224478/133‑1 (MQ=255)                                                                              cGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAatc                                                        <  1:1054856/140‑1 (MQ=255)                                                                                 aGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAatcatc                                                     >  2:592810/1‑140 (MQ=255)                                                                                       cAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGc                                               >  1:209165/1‑140 (MQ=255)                                                                                        aaaaCTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGca                                              <  2:663783/140‑1 (MQ=255)                                                                                          aaCTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGcaca                                            <  1:374254/140‑1 (MQ=255)                                                                                                    cAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCa                                  >  2:1018542/1‑140 (MQ=255)                                                                                                     aGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAg                                 <  2:510926/140‑1 (MQ=255)                                                                                                     aGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAg                                 <  1:1018542/140‑1 (MQ=255)                                                                                                           aGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAg                                 >  2:258004/1‑134 (MQ=255)                                                                                                           aGCGCGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAg                                 <  1:258004/134‑1 (MQ=255)                                                                                                            gcgcGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAg                                 >  1:1019769/1‑133 (MQ=255)                                                                                                            gcgcGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAg                                 <  2:1019769/133‑1 (MQ=255)                                                                                                            gcgcGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTta                          >  1:1062727/1‑140 (MQ=255)                                                                                                            gcgcGATAATAGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTta                          <  2:681059/140‑1 (MQ=255)                                                                                                                 ataataGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATaaa                     >  2:772105/1‑140 (MQ=255)                                                                                                                 ataataGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATaaa                     >  1:817003/1‑140 (MQ=255)                                                                                                                 ataataGGTAGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATaaa                     >  2:657783/1‑140 (MQ=255)                                                                                                                          aGCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAg            >  2:791341/1‑140 (MQ=255)                                                                                                                           gCGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAgg           <  1:592810/140‑1 (MQ=255)                                                                                                                            cGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATaaa                     >  1:460195/1‑129 (MQ=255)                                                                                                                            cGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATaaa                     <  2:460195/129‑1 (MQ=255)                                                                                                                            cGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGc          >  1:722825/1‑140 (MQ=255)                                                                                                                            cGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGc          >  2:6126/1‑140 (MQ=255)                                                                                                                            cGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGc          >  1:211355/1‑140 (MQ=255)                                                                                                                            cGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGc          >  2:934740/1‑140 (MQ=255)                                                                                                                            cGAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGc          >  1:201915/1‑140 (MQ=255)                                                                                                                             gAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCt         <  1:352562/140‑1 (MQ=255)                                                                                                                             gAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCt         <  1:657783/140‑1 (MQ=255)                                                                                                                             gAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCt         <  1:771059/140‑1 (MQ=255)                                                                                                                             gAACCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCt         <  2:1082907/140‑1 (MQ=255)                                                                                                                              aaCCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTc        >  2:998498/1‑140 (MQ=255)                                                                                                                              aaCCAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTc        >  1:946454/1‑140 (MQ=255)                                                                                                                                ccAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTTATAAAGTAACCAAGGCTCGc      >  1:806053/1‑140 (MQ=255)                                                                                                                                 cAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCt     >  1:34454/1‑140 (MQ=255)                                                                                                                                 cAAAAGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCt     >  2:400510/1‑140 (MQ=255)                                                                                                                                  aaaaGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCtt    <  1:400510/140‑1 (MQ=255)                                                                                                                                  aaaaGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCtt    <  1:578485/140‑1 (MQ=255)                                                                                                                                  aaaaGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCtt    <  1:6126/140‑1 (MQ=255)                                                                                                                                  aaaaGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCtt    <  2:34454/140‑1 (MQ=255)                                                                                                                                    aaGTCAACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTcc  <  2:1062727/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                       CGCCACGGGCAGCAGCCACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCCACAGCTGGACTAACACGCCACATATCGCCAGAATCACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCC  >  NC_000913/4003609‑4003879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑