Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,269,117 T→C intergenic (‑105/‑297) yjbS ← / → aphA uncharacterized protein YjbS/acid phosphatase/phosphotransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,269,1170TC99.1% 395.0 / NA 105intergenic (‑105/‑297)yjbS/aphAuncharacterized protein YjbS/acid phosphatase/phosphotransferase
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (54/50);  total (55/50)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 106 total aligned reads displayed.

CGTTTTGTTGCTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGA  >  NC_000913/4268980‑4269253
                                                                                                                                         |                                                                                                                                        
cGTTTTGTTGCTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCAt                                                                                                                                        >  2:430012/1‑140 (MQ=255)
cGTTTTGTTGCTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCAt                                                                                                                                        >  1:1019661/1‑140 (MQ=255)
cGTTTTGTTGCTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCAt                                                                                                                                        >  1:123570/1‑140 (MQ=255)
    ttgttgCTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCAtt                                                                                                                                    <  1:124039/140‑1 (MQ=255)
      gttgCTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTaa                                                                                                                                  <  1:514771/140‑1 (MQ=255)
      gttgCTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTaa                                                                                                                                  <  1:341433/140‑1 (MQ=255)
           tATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCa                                                                                                                             <  2:1091047/140‑1 (MQ=255)
             ttCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCAtt                                                                                                                           <  2:1039911/140‑1 (MQ=255)
              tCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTa                                                                                                                          <  2:1017326/140‑1 (MQ=255)
                 caTATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATc                                                                                                                                       >  2:146303/1‑124 (MQ=255)
                 caTATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATc                                                                                                                                       <  1:146303/124‑1 (MQ=255)
                     tGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTa                                                                                                                   <  1:898468/140‑1 (MQ=255)
                       atatatTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAg                                                                                                                                 <  1:100560/124‑1 (MQ=255)
                       atatatTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTAca                                                                                                                 >  1:377761/1‑140 (MQ=255)
                        tatatTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTAcag                                                                                                                <  1:984516/140‑1 (MQ=255)
                         atatTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTAcagc                                                                                                               <  2:346138/140‑1 (MQ=255)
                         atatTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTAcagc                                                                                                               >  2:472077/1‑140 (MQ=255)
                          tatTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTAcagca                                                                                                              <  1:23064/140‑1 (MQ=255)
                            ttCCTATCATCATCTCCATCGCGAGTGATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAGACTTCGATTGTGTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGa                                                                                                            >  2:57815/1‑140 (MQ=255)
                            ttCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGa                                                                                                            >  2:299799/1‑140 (MQ=255)
                                tatCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATaaa                                                                                                        >  1:816201/1‑140 (MQ=255)
                                 atcatcatcTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAAt                                                                                                       >  2:115947/1‑140 (MQ=255)
                                 atcatcatcTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAAt                                                                                                       >  2:278610/1‑140 (MQ=255)
                                   catcatcTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGt                                                                                                     <  2:829452/140‑1 (MQ=255)
                                    atcatcTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGtt                                                                                                    <  1:115947/140‑1 (MQ=255)
                                    atcatcTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGATAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGtt                                                                                                    <  2:931416/140‑1 (MQ=255)
                                      catcTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTa                                                                                                                   >  2:1056844/1‑123 (MQ=255)
                                      catcTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTa                                                                                                                   <  1:1056844/123‑1 (MQ=255)
                                      catcTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCt                                                                                                  >  1:473455/1‑140 (MQ=255)
                                      catcTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCt                                                                                                  >  1:1062397/1‑140 (MQ=255)
                                         ctcCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATc                                                                                               >  2:501724/1‑140 (MQ=255)
                                         ctcCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATc                                                                                               >  2:696403/1‑140 (MQ=255)
                                          tcCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCa                                                                                              >  2:137398/1‑140 (MQ=255)
                                             aTCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAAt                                                                                           >  2:298072/1‑140 (MQ=255)
                                               cgcgAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAAttt                                                                                         >  1:51435/1‑140 (MQ=255)
                                               cgcgAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAAttt                                                                                         >  1:1086296/1‑140 (MQ=255)
                                                 cgAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCg                                                                                       <  2:123570/140‑1 (MQ=255)
                                                 cgAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCg                                                                                       >  1:833910/1‑140 (MQ=255)
                                                   aGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCt                                                                                     <  2:555986/140‑1 (MQ=255)
                                                   aGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCt                                                                                     >  1:169454/1‑140 (MQ=255)
                                                   aGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCt                                                                                     >  2:120146/1‑140 (MQ=255)
                                                           aaTTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGcc                                                                             <  2:705623/140‑1 (MQ=255)
                                                           aaTTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGcc                                                                             <  2:1019661/140‑1 (MQ=255)
                                                             ttAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGa                                                                           <  2:816201/140‑1 (MQ=255)
                                                                aTCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGa                                                                        <  2:473455/140‑1 (MQ=255)
                                                                aTCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGACTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGa                                                                        >  1:135001/1‑140 (MQ=255)
                                                                 tCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGAt                                                                       <  2:1086296/140‑1 (MQ=255)
                                                                 tCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGAt                                                                       <  2:377761/140‑1 (MQ=255)
                                                                           agggtagggGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCataat                                                             <  1:12196/140‑1 (MQ=255)
                                                                             ggtagggGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCAtaataa                                                           >  1:879834/1‑140 (MQ=255)
                                                                               tagggGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGa                                                                        <  2:707064/125‑1 (MQ=255)
                                                                               tagggGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGa                                                                        >  1:707064/1‑125 (MQ=255)
                                                                               tagggGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGa                                                                        <  2:440066/125‑1 (MQ=255)
                                                                               tagggGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGa                                                                        >  1:440066/1‑125 (MQ=255)
                                                                               tagggGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAAc                                                         >  1:418210/1‑140 (MQ=255)
                                                                                 gggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGt                                                       >  2:345912/1‑140 (MQ=255)
                                                                                 gggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGt                                                       >  1:159811/1‑140 (MQ=255)
                                                                                 gggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGt                                                       >  1:738583/1‑140 (MQ=255)
                                                                                  ggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGAt                                                                       >  2:612877/1‑123 (MQ=255)
                                                                                  ggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGAt                                                                       <  1:612877/123‑1 (MQ=255)
                                                                                  ggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTa                                                      >  2:137004/1‑140 (MQ=255)
                                                                                  ggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTa                                                      >  2:656060/1‑140 (MQ=255)
                                                                                  ggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTa                                                      >  1:321125/1‑140 (MQ=255)
                                                                                  ggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTa                                                      >  1:458192/1‑140 (MQ=255)
                                                                                  ggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTa                                                      >  1:458193/1‑140 (MQ=255)
                                                                                  ggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTa                                                      >  1:224709/1‑140 (MQ=255)
                                                                                  ggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTa                                                      >  1:560575/1‑140 (MQ=255)
                                                                                       tGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAAtt                                                 >  2:1005039/1‑140 (MQ=255)
                                                                                        ggTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTa                                                >  1:778114/1‑140 (MQ=255)
                                                                                         gTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTaa                                               >  1:274987/1‑140 (MQ=255)
                                                                                          tCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAAt                                              <  2:778114/140‑1 (MQ=255)
                                                                                           cAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGGGGATTCATCATAATAAACGTAAAATTAATg                                             <  1:298072/140‑1 (MQ=255)
                                                                                           cAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCGTAATAAACGTAAAATTAATg                                             <  2:38140/140‑1 (MQ=255)
                                                                                           cAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATg                                             <  1:165562/140‑1 (MQ=255)
                                                                                           cAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATg                                             <  1:656060/140‑1 (MQ=255)
                                                                                           cAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATg                                             <  1:299799/140‑1 (MQ=255)
                                                                                           cAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATg                                             <  2:274987/140‑1 (MQ=255)
                                                                                           cAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATg                                             <  2:194703/140‑1 (MQ=255)
                                                                                           cAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATg                                             <  1:345912/140‑1 (MQ=255)
                                                                                           cAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATg                                             <  1:137398/140‑1 (MQ=255)
                                                                                           cAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATg                                             <  1:1049199/140‑1 (MQ=255)
                                                                                           cAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATg                                             <  1:967250/140‑1 (MQ=255)
                                                                                              tCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCGTTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTAt                                          >  2:669000/1‑140 (MQ=255)
                                                                                              tCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATg                                             <  1:49531/137‑1 (MQ=255)
                                                                                              tCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATg                                             >  2:49531/1‑137 (MQ=255)
                                                                                              tCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTAt                                          <  2:224709/140‑1 (MQ=255)
                                                                                                aGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATcc                                        <  2:458193/140‑1 (MQ=255)
                                                                                                aGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATcc                                        <  2:458192/140‑1 (MQ=255)
                                                                                                   aaTCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTa                                     >  2:845949/1‑140 (MQ=255)
                                                                                                        tcTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCg                                >  1:54860/1‑140 (MQ=255)
                                                                                                         cTTTATAAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGa                               >  2:737117/1‑140 (MQ=255)
                                                                                                            tataAACTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGta                            >  2:343364/1‑140 (MQ=255)
                                                                                                               aaaCTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGtaata                         <  2:879834/140‑1 (MQ=255)
                                                                                                                aaCTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGtaataa                        <  1:501724/140‑1 (MQ=255)
                                                                                                                  cTTCGATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAAc                      >  2:400189/1‑140 (MQ=255)
                                                                                                                      gATTGTTTTTGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACAttt                  >  1:311600/1‑140 (MQ=255)
                                                                                                                            ttttGTAATGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTtata            <  1:1005039/140‑1 (MQ=255)
                                                                                                                                  aaTGCTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACaaaaa      <  2:159811/140‑1 (MQ=255)
                                                                                                                                    tgctgcATCATTAAGTTCATTAAATCGTACAGCAGATAAACGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATACTTACATCGAGTAATAAACATTTTTTATACaaaaaaa    <  2:973914/140‑1 (MQ=255)
                                                                                                                                      cTGCATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGa  >  2:488536/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                        
CGTTTTGTTGCTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGA  >  NC_000913/4268980‑4269253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: