Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	938,957	A→G	T322A (ACT→GCT)	rarA →	recombination factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	938,957	0	A	G	100.0%	284.8 / NA	77	T322A (ACT→GCT)	rarA	recombination factor
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (40/37);  total (40/37)

GTATGCGCGAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTACTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGAACGCCCGGATTATG  >  NC_000913/938824‑939092                                                                                                                                      |                                                                                                                                        gTATGCGCGAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTcgcg                                                                                                                                   >  2:430406/1‑140 (MQ=255)      cgcgAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGc                                                                                                                              >  1:878524/1‑140 (MQ=255)      cgcgAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGc                                                                                                                              >  2:366230/1‑140 (MQ=255)      cgcgAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGc                                                                                                                              <  1:472494/140‑1 (MQ=255)      cgcgAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGc                                                                                                                              <  1:482911/140‑1 (MQ=255)      cgcgAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGc                                                                                                                              >  1:668871/1‑140 (MQ=255)      cgcgAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGc                                                                                                                              <  2:1070314/140‑1 (MQ=255)      cgcgAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGc                                                                                                                              >  2:821114/1‑140 (MQ=255)      cgcgAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGc                                                                                                                              >  1:170856/1‑140 (MQ=255)      cgcgAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGCGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGATGGc                                                                                                                              >  2:1057889/1‑140 (MQ=255)        cgAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGccc                                                                                                                            >  2:276413/1‑140 (MQ=255)                     cTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGc                                                                                                                              <  1:303547/125‑1 (MQ=255)                     cTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGc                                                                                                                              >  2:303547/1‑125 (MQ=255)                     cTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGaa                                                                                                               <  1:276413/140‑1 (MQ=255)                       ggtggCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAAcg                                                                                                             >  2:198637/1‑140 (MQ=255)                            cGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCa                                                                                                        <  2:668871/140‑1 (MQ=255)                            cGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCa                                                                                                        <  1:251838/140‑1 (MQ=255)                            cGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCa                                                                                                        <  1:458279/140‑1 (MQ=255)                               tCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTg                                                                                                     >  2:223768/1‑140 (MQ=255)                                    tataTGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAg                                                                                                >  1:297468/1‑140 (MQ=255)                                     atatGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAgg                                                                                               <  1:430406/140‑1 (MQ=255)                                      tatGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGc                                                                                              <  2:297468/140‑1 (MQ=255)                                       atGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCg                                                                                             <  2:878524/140‑1 (MQ=255)                                          tCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGAtt                                                                                          >  1:740280/1‑140 (MQ=255)                                           cgcgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGc                                                                                              >  1:324764/1‑135 (MQ=255)                                           cgcgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGc                                                                                              <  2:324764/135‑1 (MQ=255)                                           cgcgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTg                                                                                         <  1:223768/140‑1 (MQ=255)                                           cgcgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTg                                                                                         >  1:935238/1‑140 (MQ=255)                                           cgcgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTg                                                                                         >  2:1040176/1‑140 (MQ=255)                                           cgcgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTg                                                                                         <  2:808919/140‑1 (MQ=255)                                           cgcgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTg                                                                                         >  2:765513/1‑140 (MQ=255)                                           cgcgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTg                                                                                         >  1:226724/1‑140 (MQ=255)                                           cgcgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTg                                                                                         >  2:270973/1‑140 (MQ=255)                                             cgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGtt                                                                                       >  2:181882/1‑140 (MQ=255)                                             cgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGtt                                                                                       >  1:233316/1‑140 (MQ=255)                                             cgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGtt                                                                                       >  2:447024/1‑140 (MQ=255)                                             cgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGtt                                                                                       >  1:821063/1‑140 (MQ=255)                                             cgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGtt                                                                                       <  1:821114/140‑1 (MQ=255)                                             cgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGtt                                                                                       >  2:406007/1‑140 (MQ=255)                                             cgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCACCATTGCTCAGGCGATTg                                                                                         <  2:928644/138‑1 (MQ=255)                                             cgcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCACCATTGCTCAGGCGATTg                                                                                         >  1:928644/1‑138 (MQ=255)                                              gcgTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGttt                                                                                      >  2:1079299/1‑140 (MQ=255)                                                gTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTAc                                                                                    >  1:152212/1‑140 (MQ=255)                                                          ggCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTgcg                                                                          <  2:170856/140‑1 (MQ=255)                                                                tGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCaa                                                                    >  2:511598/1‑140 (MQ=255)                                                                        aaGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAAc                                                            <  1:270973/140‑1 (MQ=255)                                                                        aaGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAAc                                                            <  1:765513/140‑1 (MQ=255)                                                                        aaGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAAc                                                            <  2:173588/140‑1 (MQ=255)                                                                        aaGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAAc                                                            <  1:634982/140‑1 (MQ=255)                                                                        aaGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAAc                                                            <  2:431489/140‑1 (MQ=255)                                                                        aaGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAAc                                                            <  1:198637/140‑1 (MQ=255)                                                                        aaGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAAc                                                            <  2:462739/140‑1 (MQ=255)                                                                        aaGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAAc                                                            <  1:406007/140‑1 (MQ=255)                                                                         aGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACg                                                           <  1:511598/140‑1 (MQ=255)                                                                          gACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGc                                                          <  1:447024/140‑1 (MQ=255)                                                                          gACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGc                                                          >  2:432313/1‑140 (MQ=255)                                                                          gACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGc                                                          <  2:226724/140‑1 (MQ=255)                                                                               cGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGGGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCt                                                     >  1:173871/1‑140 (MQ=255)                                                                                 gTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTac                                                   <  1:366230/140‑1 (MQ=255)                                                                                  tAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTaca                                                  >  1:372659/1‑140 (MQ=255)                                                                                    aTGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACt                                                <  1:1040176/140‑1 (MQ=255)                                                                                    aTGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACt                                                <  1:1079299/140‑1 (MQ=255)                                                                                          aTCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGttt                                          >  1:4827/1‑140 (MQ=255)                                                                                                 ggCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCcg                                   >  2:105646/1‑140 (MQ=255)                                                                                                      tGCAGGTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAAATCTGTCTAGACTGCGTTTAAAGCCGCGCTg                              >  2:770844/1‑140 (MQ=255)                                                                                                          ggTGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCg                          <  1:454418/140‑1 (MQ=255)                                                                                                            tGGCAATTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGAt                        >  1:383799/1‑140 (MQ=255)                                                                                                                aaTTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTc                    >  1:498054/1‑140 (MQ=255)                                                                                                                aaTTGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTc                    >  1:1018437/1‑140 (MQ=255)                                                                                                                  ttGCGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTcgc                  >  2:36609/1‑140 (MQ=255)                                                                                                                     cGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGaa               <  2:498054/140‑1 (MQ=255)                                                                                                                     cGGCCTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGaa               >  2:736584/1‑140 (MQ=255)                                                                                                                        ccTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGAACGc            <  2:4827/140‑1 (MQ=255)                                                                                                                        ccTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGAACGc            <  1:736584/140‑1 (MQ=255)                                                                                                                        ccTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCATGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGAACGc            >  2:682898/1‑140 (MQ=255)                                                                                                                         cTGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGAACGcc           <  1:432313/140‑1 (MQ=255)                                                                                                                          tGGGATTGCTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGAACGccc          <  2:1018437/140‑1 (MQ=255)                                                                                                                                  cTTTGCTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGAACGCCCGGATTATg  >  2:126199/1‑140 (MQ=255)                                                                                                                                      |                                                                                                                                        GTATGCGCGAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTACTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGAACGCCCGGATTATG  >  NC_000913/938824‑939092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑