Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,220,971	G→A	pseudogene (1371/2648 nt)	ycgH →	putative transporter component, N‑terminal fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,220,971	0	G	A	100.0%	249.7 / NA	69	pseudogene (1371/2648 nt)	ycgH	putative transporter component, N‑terminal fragment
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (36/33);  total (36/33)

TTCAGACAGTATTATCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCGGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAATCTCCAGCAG  >  NC_000913/1220836‑1221107                                                                                                                                        |                                                                                                                                          ttCAGACAGTATTATCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTa                                                                                                                                       <  2:1041573/140‑1 (MQ=255)    aGACAGTATTATCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑gg                                                                                                                                   <  2:97215/140‑1 (MQ=255)      aCAGTATTATCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGAc                                                                                                                                 <  2:705314/140‑1 (MQ=255)      aCAGTATTATCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGAc                                                                                                                                 <  2:714333/140‑1 (MQ=255)          tattatCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAATAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGAc                                                                                                                             >  2:425971/1‑140 (MQ=255)          tattatCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGAc                                                                                                                             >  1:501822/1‑140 (MQ=255)          tattatCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGAc                                                                                                                             >  1:581486/1‑140 (MQ=255)            ttatCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACtt                                                                                                                           >  1:868447/1‑140 (MQ=255)             tatCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTa                                                                                                                          <  2:132213/140‑1 (MQ=255)                  aTCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTAttgtt                                                                                                                     >  2:852137/1‑140 (MQ=255)                  aTCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTAttgtt                                                                                                                     <  1:227424/140‑1 (MQ=255)                  aTCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTAttgtt                                                                                                                     <  1:339710/140‑1 (MQ=255)                    cTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAGTGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGa                                                                                                                   >  2:683217/1‑140 (MQ=255)                    cTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAGTCAGCTAC‑GGAc                                                                                                                                 <  2:93566/126‑1 (MQ=255)                    cTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGAc                                                                                                                                 >  1:93566/1‑126 (MQ=255)                    cTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGa                                                                                                                   <  1:172569/140‑1 (MQ=255)                    cTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGa                                                                                                                   >  2:637417/1‑140 (MQ=255)                      ttCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAgg                                                                                                                 >  2:533033/1‑140 (MQ=255)                             gatgatgGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATAc                                                                                                          >  1:261937/1‑140 (MQ=255)                                 atgGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCg                                                                                                      <  2:162806/140‑1 (MQ=255)                                 atgGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCg                                                                                                      >  2:109861/1‑140 (MQ=255)                                 atgGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCg                                                                                                      >  1:843020/1‑140 (MQ=255)                                  tgGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCgg                                                                                                     <  2:868447/140‑1 (MQ=255)                                   ggTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCggg                                                                                                    <  2:665479/140‑1 (MQ=255)                                   ggTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCggg                                                                                                    <  2:969894/140‑1 (MQ=255)                                     tCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGtt                                                                                                  <  1:1039771/140‑1 (MQ=255)                                     tCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGtt                                                                                                  <  2:738529/140‑1 (MQ=255)                                        aaCATTTACACAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCaa                                                                                               <  2:640759/140‑1 (MQ=255)                                              tACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCg                                                                                         >  2:548923/1‑140 (MQ=255)                                               aCCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGt                                                                                        <  2:261937/140‑1 (MQ=255)                                               aCCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGt                                                                                        <  1:109861/140‑1 (MQ=255)                                                                aaCCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTg                                                                       >  1:216789/1‑140 (MQ=255)                                                                           gTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAgcggc                                                            <  1:533033/140‑1 (MQ=255)                                                                             aaTTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAgcggcgc                                                          >  1:630296/1‑140 (MQ=255)                                                                               ttATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAgcggcgcgg                                                        >  1:98927/1‑140 (MQ=255)                                                                               ttATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAgcggcgcgg                                                        <  1:637417/140‑1 (MQ=255)                                                                                tATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAgcggcgcggc                                                       <  1:800657/140‑1 (MQ=255)                                                                                    tCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACg                                                   >  1:95390/1‑140 (MQ=255)                                                                                    tCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACg                                                   >  1:669661/1‑140 (MQ=255)                                                                                    tCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACg                                                   <  2:581486/140‑1 (MQ=255)                                                                                     cGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGc                                                  >  1:810261/1‑140 (MQ=255)                                                                                                gTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATc                                       <  2:630296/140‑1 (MQ=255)                                                                                                gTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATc                                       <  1:852137/140‑1 (MQ=255)                                                                                                gTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATc                                       <  2:216789/140‑1 (MQ=255)                                                                                                  cAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGa                                     >  1:316706/1‑140 (MQ=255)                                                                                                   aGCTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGaa                                    >  1:1004207/1‑140 (MQ=255)                                                                                                     cTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACt                                  <  1:105199/140‑1 (MQ=255)                                                                                                     cTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACt                                  <  2:316706/140‑1 (MQ=255)                                                                                                     cTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACt                                  >  1:954116/1‑140 (MQ=255)                                                                                                     cTTAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCAAGCTAAACGGGATCGAACt                                  <  2:98927/140‑1 (MQ=255)                                                                                                       tAATATCCGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCa                                <  2:458011/140‑1 (MQ=255)                                                                                                             ccGCACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGCGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACtg                          >  1:941278/1‑140 (MQ=255)                                                                                                                cACCGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGa                       >  1:51246/1‑140 (MQ=255)                                                                                                                   cGTATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATg                    <  2:954116/140‑1 (MQ=255)                                                                                                                     tATTAGGTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGc                  <  2:117768/140‑1 (MQ=255)                                                                                                                          ggTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGa             <  2:810261/140‑1 (MQ=255)                                                                                                                           gTGATGATAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGaa            <  2:95390/140‑1 (MQ=255)                                                                                                                             gatgatAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAAtc          >  2:231609/1‑140 (MQ=255)                                                                                                                             gatgatAAATCAGCCAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAAtc          >  2:733297/1‑140 (MQ=255)                                                                                                                              atgatAAATCAGCTACGGGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAAtc          >  2:990472/1‑140 (MQ=255)                                                                                                                              atgatAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAAtct         >  2:1006624/1‑140 (MQ=255)                                                                                                                               tgatAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGa             >  2:690663/1‑135 (MQ=255)                                                                                                                               tgatAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGa             <  1:690663/135‑1 (MQ=255)                                                                                                                               tgatAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAAtctc        >  2:707458/1‑140 (MQ=255)                                                                                                                               tgatAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAAtctc        >  2:492182/1‑140 (MQ=255)                                                                                                                               tgatAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAAtctc        >  2:407502/1‑140 (MQ=255)                                                                                                                               tgatAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAAtctc        >  1:659382/1‑140 (MQ=255)                                                                                                                               tgatAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAAtctc        >  1:350462/1‑140 (MQ=255)                                                                                                                               tgatAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAAtctc        >  1:248627/1‑140 (MQ=255)                                                                                                                                 atAAATCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAATCTCca      >  1:1065951/1‑140 (MQ=255)                                                                                                                                     aTCAGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAATCTCcagcag  <  2:53385/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                          TTCAGACAGTATTATCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCGGCTAC‑GGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAATCTCCAGCAG  >  NC_000913/1220836‑1221107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑