BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	150,781	(A)_6→5	coding (173/1239 nt)	yadC ←	fimbrial tip‑adhesin YadC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	150,776	0	A	.	100.0%	474.8 / NA	109	coding (178/1239 nt)	yadC	fimbrial tip‑adhesin YadC
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (46/63); total (46/63)

Only 100 of 117 total aligned reads displayed.

ACCATGGCATTTTCAATAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAA  >  NC_000913/150637‑150906

aCCATGGCATTTTCAATAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTtata                                                                                                                                    >  1:1039545/1‑140 (MQ=255)

   aTGGCATTTTCAATAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATaaaa                                                                                                                                 >  1:1083806/1‑140 (MQ=255)

     ggCATTTTCAATAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATaaaaac                                                                                                                               >  1:979560/1‑139 (MQ=255)

     ggCATTTTCAATAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATaaaaac                                                                                                                               >  2:132003/1‑139 (MQ=255)

     ggCATTTTCAATAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATaaaaac                                                                                                                               >  2:550160/1‑139 (MQ=255)

     ggCATTTTCAATAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATaaaaac                                                                                                                               >  2:203474/1‑139 (MQ=255)

         ttttCAATAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGGATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAg                                                                                                                          >  2:697353/1‑140 (MQ=255)

          tttCAATAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGt                                                                                                                         >  1:779451/1‑140 (MQ=255)

           ttCAATAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGt                                                                                                                         <  2:184808/139‑1 (MQ=255)

              aaTAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGttgct                                                                                                                     <  1:550160/140‑1 (MQ=255)

                tAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGttgcttg                                                                                                                   <  1:705327/140‑1 (MQ=255)

                tAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCACAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGttgcttg                                                                                                                   <  2:1082062/140‑1 (MQ=255)

                   ttATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTg                                                                                                                <  1:658127/140‑1 (MQ=255)

                     aTTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGtt                                                                                                              <  1:1031866/140‑1 (MQ=255)

                         gACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGAtg                                                                                                          <  1:1052525/140‑1 (MQ=255)

                          aCCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGAtgt                                                                                                         <  2:779451/140‑1 (MQ=255)

                           ccAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGAtgtg                                                                                                        <  1:752631/140‑1 (MQ=255)

                            cAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATgtgt                                                                                                       >  2:719647/1‑140 (MQ=255)

                            cAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATgtgt                                                                                                       >  1:1006865/1‑140 (MQ=255)

                              ggATTCGCTCTGCCAGATGTATTGCAGTAAAAAATACCACCACCGGTACCTGTATCCAGGGATGACCAGTACATTTTTACCCCCCTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTaa                                                                                                     >  2:28475/1‑140 (MQ=255)

                               gATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTg                                                                                                                <  1:602971/128‑1 (MQ=255)

                               gATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTg                                                                                                                >  2:602971/1‑128 (MQ=255)

                               gATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAAt                                                                                                    <  1:884298/140‑1 (MQ=255)

                                 ttCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTa                                                                                                  <  1:77785/140‑1 (MQ=255)

                                   cGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGAtgt                                                                                                         >  2:763825/1‑131 (MQ=255)

                                    gCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGATCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAg                                                                                               >  2:126739/1‑140 (MQ=255)

                                    gCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAg                                                                                               <  1:18383/140‑1 (MQ=255)

                                       ctGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTc                                                                                            <  2:260572/140‑1 (MQ=255)

                                              aTGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCAt                                                                                          >  1:197443/1‑135 (MQ=255)

                                                 tATTGCTGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCgg                                                                                  <  1:244303/140‑1 (MQ=255)

                                                 tATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCgg                                                                                  <  2:979560/140‑1 (MQ=255)

                                                      cAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTg                                                                             >  1:152506/1‑140 (MQ=255)

                                                        gTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGa                                                                           <  1:404555/140‑1 (MQ=255)

                                                         tAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGa                                                                           <  2:1073624/139‑1 (MQ=255)

                                                         tAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGa                                                                           >  1:1073624/1‑139 (MQ=255)

                                                          aaaGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGATCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAgg                                                                         <  1:126739/140‑1 (MQ=255)

                                                          aaaGAATACCACCACCGGTACCTGTATCCAGGTATCACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGCTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAgg                                                                         <  2:1008944/140‑1 (MQ=255)

                                                           aaGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCa                                                                                <  1:257899/132‑1 (MQ=255)

                                                           aaGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCa                                                                                >  2:257899/1‑132 (MQ=255)

                                                           aaGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAggg                                                                        >  1:1084665/1‑140 (MQ=255)

                                                                tACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTc                                                                   >  2:21448/1‑140 (MQ=255)

                                                                tACCACCACCGGTACCTATATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTc                                                                   >  1:567638/1‑140 (MQ=255)

                                                                 accaccaccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCg                                                                  >  1:18541/1‑140 (MQ=255)

                                                                   caccaccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAgg                                                                         <  1:991036/131‑1 (MQ=255)

                                                                   caccaccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGAt                                                                >  2:1033181/1‑140 (MQ=255)

                                                                   caccaccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGA‑GGGCCTCGATa                                                               >  2:369272/1‑140 (MQ=255)

                                                                   caccaccGGTACCTATATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGAt                                                                <  2:567638/140‑1 (MQ=255)

                                                                     ccaccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAg                                                              >  2:31207/1‑140 (MQ=255)

                                                                     ccaccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAg                                                              >  2:977972/1‑140 (MQ=255)

                                                                     ccaccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAg                                                              >  2:1082653/1‑140 (MQ=255)

                                                                     ccaccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAg                                                              <  1:977972/140‑1 (MQ=255)

                                                                        ccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGa                                                                           >  2:508000/1‑124 (MQ=255)

                                                                        ccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGa                                                                           <  1:508000/124‑1 (MQ=255)

                                                                                tGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGa                                                                 >  1:912315/1‑126 (MQ=255)

                                                                                   aTCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTc                                                    >  1:406657/1‑136 (MQ=255)

                                                                                   aTCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTc                                                    <  2:406657/136‑1 (MQ=255)

                                                                                    tCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCa                                               <  2:1083806/140‑1 (MQ=255)

                                                                                       aGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCatta                                            >  2:54347/1‑140 (MQ=255)

                                                                                        ggTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCattat                                           >  1:714997/1‑140 (MQ=255)

                                                                                         gTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCattatt                                          >  1:19113/1‑140 (MQ=255)

                                                                                         gTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCattatt                                          >  1:578759/1‑140 (MQ=255)

                                                                                         gTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCattatt                                          >  2:459124/1‑140 (MQ=255)

                                                                                            tGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTcc                                       >  1:499895/1‑140 (MQ=255)

                                                                                            tGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTcc                                       >  2:408851/1‑140 (MQ=255)

                                                                                              aCCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCca                                     >  2:914486/1‑140 (MQ=255)

                                                                                              aCCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCca                                     >  1:340834/1‑140 (MQ=255)

                                                                                              aCCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCca                                     >  2:523615/1‑140 (MQ=255)

                                                                                              aCCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTACTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCca                                     >  1:192604/1‑140 (MQ=255)

                                                                                                  gTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAAt                                 >  1:812401/1‑140 (MQ=255)

                                                                                                  gTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAAt                                 <  2:723982/140‑1 (MQ=255)

                                                                                                  gTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAAt                                 <  1:31078/140‑1 (MQ=255)

                                                                                                   tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATa                                <  2:578759/140‑1 (MQ=255)

                                                                                                   tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATa                                >  1:977595/1‑140 (MQ=255)

                                                                                                    aCATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATaa                               <  1:408851/140‑1 (MQ=255)

                                                                                                    aCATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATaa                               <  1:272496/140‑1 (MQ=255)

                                                                                                    aCATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATaa                               <  2:128565/140‑1 (MQ=255)

                                                                                                            aCCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAACCCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGTGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGta                       <  2:154708/140‑1 (MQ=255)

                                                                                                            aCCCCAGTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGta                       <  1:295878/140‑1 (MQ=255)

                                                                                                                  gTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACt                           <  2:336327/130‑1 (MQ=255)

                                                                                                                  gTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACt                           >  1:336327/1‑130 (MQ=255)

                                                                                                                  gTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGta                       <  2:912309/134‑1 (MQ=255)

                                                                                                                  gTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGta                       >  1:912309/1‑134 (MQ=255)

                                                                                                                  gTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCa                 <  1:122606/140‑1 (MQ=255)

                                                                                                                  gTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCa                 >  2:573653/1‑140 (MQ=255)

                                                                                                                  gTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCa                 <  1:1057863/140‑1 (MQ=255)

                                                                                                                  gTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCa                 >  1:941368/1‑140 (MQ=255)

                                                                                                                  gTCGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCa                 <  1:760228/140‑1 (MQ=255)

                                                                                                                    cGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCact               <  1:414555/140‑1 (MQ=255)

                                                                                                                    cGGGCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCact               <  2:939549/140‑1 (MQ=255)

                                                                                                                      ggCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGA‑GGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCactgac            <  1:369272/140‑1 (MQ=255)

                                                                                                                       gCCGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCactgac            <  2:526470/140‑1 (MQ=255)

                                                                                                                        ccGAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCactgact           <  2:340834/140‑1 (MQ=255)

                                                                                                                          gAGCTGCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGt         <  2:217862/140‑1 (MQ=255)

                                                                                                                               gCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTac    <  2:499895/140‑1 (MQ=255)

                                                                                                                               gCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTac    <  2:427160/140‑1 (MQ=255)

                                                                                                                               gCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTac    <  2:19113/140‑1 (MQ=255)

                                                                                                                               gCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTac    <  1:28475/140‑1 (MQ=255)

                                                                                                                               gCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTac    <  2:941368/140‑1 (MQ=255)

                                                                                                                               gCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTac    <  1:459124/140‑1 (MQ=255)

                                                                                                                               gCGTGGGTTTAT‑AAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTac    <  1:52555/140‑1 (MQ=255)

ACCATGGCATTTTCAATAGTTATTGGACCAGGATTCGCTCTGCCAGATGTATTGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAA  >  NC_000913/150637‑150906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`