Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,486,422	T→C	F69L (TTC→CTC)	lptF →	lipopolysaccharide transport system protein LptF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,486,422	0	T	C	100.0%	246.9 / NA	68	F69L (TTC→CTC)	lptF	lipopolysaccharide transport system protein LptF
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (22/46);  total (22/46)

GATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGTTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGCGGTATTCACGGCAATCGTAGCG  >  NC_000913/4486289‑4486556                                                                                                                                      |                                                                                                                                       gATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCg                                                                                                                                  <  2:186948/140‑1 (MQ=255)   tcttcttctGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCggg                                                                                                                                <  2:971158/140‑1 (MQ=255)     ttcttctGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGgct                                                                                                                              <  1:510473/140‑1 (MQ=255)     ttcttctGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGgct                                                                                                                              <  1:740244/140‑1 (MQ=255)          ctGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCtga                                                                                                                         >  2:271455/1‑140 (MQ=255)             tCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCtgatga                                                                                                                      >  2:326421/1‑140 (MQ=255)             tCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCtgatga                                                                                                                      >  2:680586/1‑140 (MQ=255)                aaaGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGc                                                                                                                   <  2:51392/140‑1 (MQ=255)                aaaGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGc                                                                                                                   <  2:680715/140‑1 (MQ=255)                   gTTAGTGAGGATCCTGGGCGCAGCGGTTGACGGCGATATTCCGGGGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTgg                                                                                                                <  1:321738/140‑1 (MQ=255)                   gTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTgg                                                                                                                <  2:454347/140‑1 (MQ=255)                    ttAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCACGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCA‑TAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGc                                                                                                              <  2:861893/140‑1 (MQ=255)                     tAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGc                                                                                                              <  1:326421/140‑1 (MQ=255)                     tAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGc                                                                                                              <  1:417066/140‑1 (MQ=255)                     tAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGc                                                                                                              <  2:228966/140‑1 (MQ=255)                     tAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGc                                                                                                              <  1:496670/140‑1 (MQ=255)                     tAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCAAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGc                                                                                                              <  2:180090/140‑1 (MQ=255)                      aGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCa                                                                                                             <  2:19256/140‑1 (MQ=255)                        tGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCaaa                                                                                                           <  1:455379/140‑1 (MQ=255)                        tGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCaaa                                                                                                           <  2:373677/140‑1 (MQ=255)                        tGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCaaa                                                                                                           <  2:1026823/140‑1 (MQ=255)                            gATCCTCGGCGCAGTGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGt                                                                                                       >  1:148366/1‑140 (MQ=255)                             aTCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACg                                                                                                                    <  2:1075703/126‑1 (MQ=255)                             aTCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACg                                                                                                                    >  1:1075703/1‑126 (MQ=255)                                  cGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAACCTGCTCCTCGGGCTGCTGATGACGCTGGGc                                                                                                              >  1:910618/1‑127 (MQ=255)                                  cGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAACCTGCTCCTCGGGCTGCTGATGACGCTGGGc                                                                                                              <  2:910618/127‑1 (MQ=255)                                      gcAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAg                                                                                             >  2:671176/1‑140 (MQ=255)                                      gcAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAg                                                                                             <  1:615294/140‑1 (MQ=255)                                        aGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCa                                                                                                             <  2:1015618/122‑1 (MQ=255)                                        aGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCa                                                                                                             >  1:1015618/1‑122 (MQ=255)                                         gCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGa                                                                                          >  1:806855/1‑140 (MQ=255)                                          cGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGaa                                                                                         >  2:661360/1‑140 (MQ=255)                                            gTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAAt                                                                                       <  1:455344/140‑1 (MQ=255)                                                 cGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACgg                                                                                  <  2:148366/140‑1 (MQ=255)                                                 cGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACgg                                                                                  <  1:502905/140‑1 (MQ=255)                                                       tatTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTG‑CATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAatgca                                                                           <  2:3731/140‑1 (MQ=255)                                                        atTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAatgca                                                                           <  1:206192/140‑1 (MQ=255)                                                        atTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAatgca                                                                           <  1:724799/140‑1 (MQ=255)                                                        atTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAatgca                                                                           <  1:271455/140‑1 (MQ=255)                                                             ggCGAATCTGGTGCTCTCCCTCCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCt                                                                      <  2:314350/140‑1 (MQ=255)                                                                  aTCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGc                                                                 <  2:364841/140‑1 (MQ=255)                                                                  aTCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGc                                                                 <  2:806855/140‑1 (MQ=255)                                                                          ctctCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCaa                                                         <  1:176749/140‑1 (MQ=255)                                                                                  tctcGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTc                                                 >  1:950042/1‑140 (MQ=255)                                                                                  tctcGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTc                                                 >  1:1075710/1‑140 (MQ=255)                                                                                       ggTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTg                                            >  2:874096/1‑140 (MQ=255)                                                                                       ggTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTg                                            >  1:238364/1‑140 (MQ=255)                                                                                         ttGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGtt                                                  >  2:1020029/1‑132 (MQ=255)                                                                                         ttGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGtt                                                  <  1:1020029/132‑1 (MQ=255)                                                                                         ttGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGaa                                          >  1:601040/1‑140 (MQ=255)                                                                                           gggCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAg                                        <  1:918969/140‑1 (MQ=255)                                                                                              cGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGa                                           >  1:381797/1‑134 (MQ=255)                                                                                              cGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGa                                           <  2:381797/134‑1 (MQ=255)                                                                                                tGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCa                                   <  2:1075710/140‑1 (MQ=255)                                                                                                  ccGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGaa                                          <  1:808779/131‑1 (MQ=255)                                                                                                  ccGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGaa                                          >  2:808779/1‑131 (MQ=255)                                                                                                       aaTGGCGCAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATcc                            <  1:874096/140‑1 (MQ=255)                                                                                                           gcgcAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGc                        <  2:639180/140‑1 (MQ=255)                                                                                                            cgcAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGc                                    <  1:711694/127‑1 (MQ=255)                                                                                                            cgcAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGc                                    >  2:711694/1‑127 (MQ=255)                                                                                                            cgcAGCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGCg                       <  1:671176/140‑1 (MQ=255)                                                                                                                gCTTATCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGCGGTAt                   >  1:211339/1‑140 (MQ=255)                                                                                                                     tCCTGCCATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGCGGTATTCACg              <  1:710142/140‑1 (MQ=255)                                                                                                                           cATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGCGGTATTCACGGc            <  1:357081/136‑1 (MQ=255)                                                                                                                           cATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGCGGTATTCACGGc            >  2:357081/1‑136 (MQ=255)                                                                                                                           cATTAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGCGGTATTCACGGCAATc        >  1:934911/1‑140 (MQ=255)                                                                                                                             ttAAGCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGCGGTATTCACGGCAATCGt      <  2:934911/140‑1 (MQ=255)                                                                                                                                 gCCTGCTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGCGGTATTCACGTCAATCGTAgcg  <  1:921778/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                       GATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGTTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGCGGTATTCACGGCAATCGTAGCG  >  NC_000913/4486289‑4486556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑