BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,765,681	T→C	C1167R (TGC→CGC)	rhsA →	rhs element protein RhsA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,765,681	0	T	C	100.0%	360.5 / NA	104	C1167R (TGC→CGC)	rhsA	rhs element protein RhsA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (52/52); total (52/52)

Only 100 of 116 total aligned reads displayed.

CGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTA  >  NC_000913/3765544‑3765808

cGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGgcgc                                                                                                                               <  1:224328/140‑1 (MQ=255)

 gTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGcgcg                                                                                                                              <  1:217024/140‑1 (MQ=255)

  tGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGgcgcgc                                                                                                                             >  1:750667/1‑140 (MQ=255)

  tGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGgcgcgc                                                                                                                             >  1:419859/1‑140 (MQ=255)

  tGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGgcgcgc                                                                                                                             >  2:1138421/1‑140 (MQ=255)

  tGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGgcgcgc                                                                                                                             >  2:364271/1‑140 (MQ=255)

  tGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGgcgcgc                                                                                                                             >  1:834609/1‑140 (MQ=255)

  tGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGgcgcgc                                                                                                                             >  2:396411/1‑140 (MQ=255)

  tGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGgcgcgc                                                                                                                             >  2:403088/1‑140 (MQ=255)

  tGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCAGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGgcgcgc                                                                                                                             >  2:731084/1‑140 (MQ=255)

     ggCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGa                                                                                                                          <  1:710195/140‑1 (MQ=255)

               tGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCAGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGaa                                                                                                                <  2:654864/140‑1 (MQ=255)

                 gAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATg                                                                                                              >  1:728515/1‑140 (MQ=255)

                     aGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGa                                                                                                                          >  1:943099/1‑124 (MQ=255)

                     aGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGa                                                                                                                          <  2:943099/124‑1 (MQ=255)

                     aGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGc                                                                                                          <  2:1152428/140‑1 (MQ=255)

                     aGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGc                                                                                                          >  1:603862/1‑140 (MQ=255)

                      gATGCAAAACCAGACGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCa                                                                                                         <  2:1418594/140‑1 (MQ=255)

                         gCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAAcc                                                                                                      >  1:177217/1‑140 (MQ=255)

                          cAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCACCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACct                                                                                                     <  2:844064/140‑1 (MQ=255)

                            aaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACctgc                                                                                                   <  2:348042/140‑1 (MQ=255)

                            aaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACctgc                                                                                                   <  1:697088/140‑1 (MQ=255)

                            aaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACctgc                                                                                                   >  2:1215585/1‑140 (MQ=255)

                                 aGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGGTGAATGGGGCAACCTGCtgaat                                                                                              >  1:1010279/1‑140 (MQ=255)

                                   aTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCtgaatga                                                                                            >  2:1140547/1‑140 (MQ=255)

                                   aTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCtgaatga                                                                                            >  2:1172196/1‑140 (MQ=255)

                                    tGGCCCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCtgaatgaa                                                                                           <  1:1064193/140‑1 (MQ=255)

                                      gACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAaga                                                                                         <  1:1015207/140‑1 (MQ=255)

                                       aCCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAagag                                                                                        >  1:248200/1‑140 (MQ=255)

                                       aCCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAagag                                                                                        >  2:916510/1‑140 (MQ=255)

                                         ccGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGaa                                                                                      >  1:763906/1‑140 (MQ=255)

                                             tgtACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCg                                                                                  >  2:1181603/1‑140 (MQ=255)

                                             tgtACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCg                                                                                  >  2:382493/1‑140 (MQ=255)

                                                 cacGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATc                                                                              <  1:403088/140‑1 (MQ=255)

                                                 cacGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATc                                                                              >  2:15053/1‑140 (MQ=255)

                                                 cacGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATc                                                                              >  2:915216/1‑140 (MQ=255)

                                                   cGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAg                                                                            >  2:237613/1‑140 (MQ=255)

                                                   cGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAg                                                                            >  1:672794/1‑140 (MQ=255)

                                                   cGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAg                                                                            >  1:1117899/1‑140 (MQ=255)

                                                      cGGCGCGAAAAATCCACCTGTACCACTGCTACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTg                                                                         >  1:430416/1‑140 (MQ=255)

                                                      cGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATc                                                                              <  1:985697/135‑1 (MQ=255)

                                                      cGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTg                                                                         >  1:572572/1‑140 (MQ=255)

                                                      cGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTg                                                                         >  1:1343530/1‑140 (MQ=255)

                                                      cGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGAGCAACCTGCTGAATGAAGAGAACCCGCATc                                                                              >  2:985697/1‑135 (MQ=255)

                                                       ggCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTgc                                                                        >  2:1404995/1‑140 (MQ=255)

                                                       ggCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTgc                                                                        >  1:1258716/1‑140 (MQ=255)

                                                       ggCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTgc                                                                        >  1:1117618/1‑140 (MQ=255)

                                                       ggCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTgc                                                                        >  1:684141/1‑140 (MQ=255)

                                                       ggCGCGAAAAATCCACCTGTACCACGGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCACGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGAGCAACCTGCTGAATGAAGAGAACCCGCATCATCTgc                                                                        >  2:1281394/1‑140 (MQ=11)

                                                         cgcgAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAg                                                                            >  1:1243524/1‑134 (MQ=255)

                                                         cgcgAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAg                                                                            <  2:1243524/134‑1 (MQ=255)

                                                         cgcgAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTgcag                                                                      >  1:296233/1‑140 (MQ=255)

                                                           cgAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTgcagca                                                                    <  2:419859/140‑1 (MQ=255)

                                                              aaaaTCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCt                                                                 <  1:382493/140‑1 (MQ=255)

                                                                       cTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCt                                                        >  1:642603/1‑140 (MQ=255)

                                                                            ccACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCgg                                                   >  1:621674/1‑140 (MQ=255)

                                                                            ccACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCgg                                                   >  1:110324/1‑140 (MQ=255)

                                                                              aCTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCgggg                                                 <  2:1343530/140‑1 (MQ=255)

                                                                              aCTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCgggg                                                 <  2:1025674/140‑1 (MQ=255)

                                                                              aCTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCgggg                                                 <  2:1117899/140‑1 (MQ=255)

                                                                              aCTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCgggg                                                 <  1:237613/140‑1 (MQ=255)

                                                                              aCTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCAACAGCTGCAGCAGCTTATCCGCCTGCCgggg                                                 <  2:26965/140‑1 (MQ=255)

                                                                               cTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGgc                                                >  1:765178/1‑140 (MQ=255)

                                                                                 gCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGgcag                                              <  1:1172196/140‑1 (MQ=255)

                                                                                 gCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGgcag                                              <  2:834609/140‑1 (MQ=255)

                                                                                 gCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGgcag                                              <  1:991954/140‑1 (MQ=255)

                                                                                 gCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGgcag                                              <  2:621674/140‑1 (MQ=255)

                                                                                  cGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTa                                                               >  1:812103/1‑122 (MQ=255)

                                                                                  cGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTa                                                               <  2:812103/122‑1 (MQ=255)

                                                                                  cGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGgcagc                                             <  1:15053/140‑1 (MQ=255)

                                                                                  cGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGgcagc                                             >  1:699494/1‑140 (MQ=255)

                                                                                    aCCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGcagcag                                           >  2:1389368/1‑140 (MQ=255)

                                                                                    aCCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGcagcag                                           >  2:730504/1‑140 (MQ=255)

                                                                                    aCCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGcagcag                                           >  2:1252305/1‑140 (MQ=255)

                                                                                    aCCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGcagcag                                           >  1:1312740/1‑140 (MQ=255)

                                                                                                    gCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCg                           <  1:916510/140‑1 (MQ=255)

                                                                                                    gCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCg                           <  2:750667/140‑1 (MQ=255)

                                                                                                      tGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCGTCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGc                         <  1:1181603/140‑1 (MQ=255)

                                                                                                      tGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGc                         <  2:1312740/140‑1 (MQ=255)

                                                                                                      tGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGc                         <  2:728515/140‑1 (MQ=255)

                                                                                                      tGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGc                         <  2:1010279/140‑1 (MQ=255)

                                                                                                      tGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGc                         <  1:1252305/140‑1 (MQ=255)

                                                                                                       ggCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGcc                        <  2:572572/140‑1 (MQ=255)

                                                                                                       ggCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGcc                        <  2:65680/140‑1 (MQ=255)

                                                                                                       ggCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGcc                        <  1:364271/140‑1 (MQ=255)

                                                                                                       ggCCCTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGcc                        <  2:127892/140‑1 (MQ=255)

                                                                                                           cTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTa                    <  1:1334732/140‑1 (MQ=37)

                                                                                                           cTTATCAGCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTa                    <  1:1389368/140‑1 (MQ=37)

                                                                                                                  gCAAGGAAGGGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAAc             >  2:605982/1‑140 (MQ=37)

                                                                                                                       gaaggGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCa        <  1:1206241/140‑1 (MQ=17)

                                                                                                                        aaggGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAGGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCAc       >  1:2525/1‑140 (MQ=16)

                                                                                                                        aaggGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCAc       <  1:730504/140‑1 (MQ=17)

                                                                                                                        aaggGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCAc       <  1:915216/140‑1 (MQ=17)

                                                                                                                        aaggGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCAc       >  1:687404/1‑140 (MQ=18)

                                                                                                                        aaggGACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCAc       <  1:830401/140‑1 (MQ=17)

                                                                                                                          gggACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCg     <  2:765178/140‑1 (MQ=17)

                                                                                                                          gggACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCg     <  1:499881/140‑1 (MQ=17)

                                                                                                                           ggACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGc    >  1:1062578/1‑140 (MQ=17)

                                                                                                                            gACAACAGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCt   >  1:385220/1‑140 (MQ=14)

                                                                                                                             acaacaGAATGGCGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGAGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCta  >  2:560801/1‑140 (MQ=11)

CGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTA  >  NC_000913/3765544‑3765808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`