BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,833,991	T→C	C197C (TGT→TGC)	ydjX →	DedA family protein YdjX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,833,991	0	T	C	99.1%	390.5 / ‑5.0	110	C197C (TGT→TGC)	ydjX	DedA family protein YdjX
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (58/51); total (59/51)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 116 total aligned reads displayed.

GATTAACCACAATCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGTCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAGAACGATGTTGCAACA  >  NC_000913/1833855‑1834126

gATTAACCACAATCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACtctgcctg                                                                                                                                      <  1:1415762/140‑1 (MQ=255)

      ccACAATCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGc                                                                                                                                <  1:312160/140‑1 (MQ=255)

          aaTCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTgg                                                                                                                            >  1:1390113/1‑140 (MQ=255)

            tCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGgcg                                                                                                                          <  1:388687/140‑1 (MQ=255)

            tCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGgcg                                                                                                                          <  2:1390113/140‑1 (MQ=255)

            tCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGgcg                                                                                                                          <  2:73500/140‑1 (MQ=255)

            tCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGgcg                                                                                                                          >  2:741301/1‑140 (MQ=255)

            tCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGgcg                                                                                                                          <  2:318882/140‑1 (MQ=255)

               ccTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTg                                                                                                                       >  1:717334/1‑140 (MQ=255)

               ccTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTg                                                                                                                       >  2:1232724/1‑140 (MQ=255)

                 ttCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGtt                                                                                                                     <  2:717334/140‑1 (MQ=255)

                 ttCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGtt                                                                                                                     >  2:248033/1‑140 (MQ=255)

                        cTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGt                                                                                                                      <  1:1002659/132‑1 (MQ=255)

                        cTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGt                                                                                                                      >  2:1002659/1‑132 (MQ=255)

                           ataCCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTc                                                                                                           <  2:1211693/140‑1 (MQ=255)

                             aCCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCa                                                                                                         <  2:1007127/140‑1 (MQ=255)

                                   aTTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGc                                                                                                   >  2:584279/1‑140 (MQ=255)

                                   aTTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGc                                                                                                   >  2:356833/1‑140 (MQ=255)

                                    tttCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCa                                                                                                  >  1:1053364/1‑140 (MQ=255)

                                     ttCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCaa                                                                                                 >  1:14071/1‑140 (MQ=255)

                                         gCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAAct                                                                                             >  1:305525/1‑140 (MQ=255)

                                           aCTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAActct                                                                                           <  2:305525/140‑1 (MQ=255)

                                             tCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTAc                                                                                         >  2:598522/1‑140 (MQ=255)

                                             tCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTAc                                                                                         >  1:1052140/1‑140 (MQ=255)

                                                cGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGcc                                                                                      <  1:1232724/140‑1 (MQ=255)

                                                     cTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGaca                                                                                 <  1:598522/140‑1 (MQ=255)

                                                       aCCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGAcaca                                                                               <  1:504035/140‑1 (MQ=255)

                                                       aCCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGAcaca                                                                               >  2:143842/1‑140 (MQ=255)

                                                       aCCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGAcaca                                                                               >  2:820945/1‑140 (MQ=255)

                                                         ccGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACaaa                                                                             >  1:921314/1‑140 (MQ=255)

                                                           ggTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGC‑GGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACaa                                                                              >  2:613598/1‑136 (MQ=255)

                                                           ggTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGC‑GGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACaa                                                                              <  1:613598/136‑1 (MQ=255)

                                                            gTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACAt                                                                          <  2:14071/140‑1 (MQ=255)

                                                             tATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTa                                                                                          >  1:1383411/1‑123 (MQ=255)

                                                             tATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGAcaca                                                                               <  1:893411/134‑1 (MQ=255)

                                                             tATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGAcaca                                                                               <  2:1284802/134‑1 (MQ=255)

                                                             tATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGAcaca                                                                               >  1:1284802/1‑134 (MQ=255)

                                                             tATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACAtg                                                                         >  1:1238371/1‑140 (MQ=255)

                                                             tATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTAGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGAcaca                                                                               >  2:893411/1‑134 (MQ=255)

                                                                 gTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGa                                                                     <  2:23068/140‑1 (MQ=255)

                                                                  ttatttatACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCg                                                                                    <  2:1412321/124‑1 (MQ=255)

                                                                  ttatttatACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCg                                                                                    >  1:1412321/1‑124 (MQ=255)

                                                                  ttatttatACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGAt                                                                    >  1:1197541/1‑140 (MQ=255)

                                                                  ttatttatACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGAt                                                                    >  1:715855/1‑140 (MQ=255)

                                                                       tataCCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGTCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGAtctgtc                                                               >  1:458855/1‑140 (MQ=255)

                                                                       tataCCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGAtctgtc                                                               >  2:1330836/1‑140 (MQ=255)

                                                                       tataCCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGAtctgtc                                                               >  2:602857/1‑140 (MQ=255)

                                                                       tataCCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGAtctgtc                                                               >  1:585789/1‑140 (MQ=255)

                                                                       tataCCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGAtctgtc                                                               >  2:1421261/1‑140 (MQ=255)

                                                                          aCCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGc                                                            >  1:937476/1‑140 (MQ=255)

                                                                            cGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCtt                                                          >  1:1251512/1‑140 (MQ=255)

                                                                            cGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCtt                                                          >  1:1382985/1‑140 (MQ=255)

                                                                            cGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCtt                                                          >  1:650491/1‑140 (MQ=255)

                                                                            cGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCtt                                                          >  1:710880/1‑140 (MQ=255)

                                                                              tGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGAt                                                                    >  1:1045704/1‑128 (MQ=255)

                                                                              tGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTcg                                                        >  1:357779/1‑140 (MQ=255)

                                                                              tGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTcg                                                        >  2:87974/1‑140 (MQ=255)

                                                                               gATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGa                                                                     >  2:63094/1‑126 (MQ=255)

                                                                               gATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTcgc                                                       >  1:937494/1‑140 (MQ=255)

                                                                               gATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTcgc                                                       >  2:1304564/1‑140 (MQ=255)

                                                                                aTGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTcgcg                                                      >  1:820358/1‑140 (MQ=255)

                                                                                aTGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTcgcg                                                      >  1:647577/1‑140 (MQ=255)

                                                                                aTGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTcgcg                                                      >  2:1348218/1‑140 (MQ=255)

                                                                                aTGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTcgcg                                                      >  1:1368703/1‑140 (MQ=255)

                                                                                 tGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCgcgc                                                     <  2:1197541/140‑1 (MQ=255)

                                                                                 tGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCgcgc                                                     <  2:715855/140‑1 (MQ=255)

                                                                                   gCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGcgccg                                                   <  1:1330836/140‑1 (MQ=255)

                                                                                   gCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGcgccg                                                   <  1:602857/140‑1 (MQ=255)

                                                                                    cAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGcgccgc                                                  <  1:1348218/140‑1 (MQ=255)

                                                                                    cAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGcgccgc                                                  >  1:990191/1‑140 (MQ=255)

                                                                                     aaGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCa                                                 <  2:921314/140‑1 (MQ=255)

                                                                                     aaGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCa                                                 <  1:820945/140‑1 (MQ=255)

                                                                                      aGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAg                                                <  2:937476/140‑1 (MQ=255)

                                                                                      aGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAg                                                <  2:924468/140‑1 (MQ=255)

                                                                                                ccAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACt                                      <  1:584279/140‑1 (MQ=255)

                                                                                                  aaTGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCa                                    >  2:1319926/1‑140 (MQ=255)

                                                                                                    tGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAg                                                >  1:1016488/1‑126 (MQ=255)

                                                                                                    tGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAg                                                <  2:1016488/126‑1 (MQ=255)

                                                                                                      aaGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCa                                <  1:148528/140‑1 (MQ=255)

                                                                                                       aGGCATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCaa                               <  1:1285455/140‑1 (MQ=255)

                                                                                                          cATTACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCaaaaa                            >  2:1334853/1‑140 (MQ=255)

                                                                                                             tACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATg                         >  2:25377/1‑140 (MQ=255)

                                                                                                             tACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATg                         <  1:1310589/140‑1 (MQ=255)

                                                                                                             tACGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATg                         <  2:710880/140‑1 (MQ=255)

                                                                                                               cGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGaa                       <  2:647577/140‑1 (MQ=255)

                                                                                                               cGCTGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGGCCAGCTCGCAAAACCCTACCCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGaa                       <  2:1398785/140‑1 (MQ=255)

                                                                                                                  tGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCaaa                              >  1:312494/1‑130 (MQ=255)

                                                                                                                  tGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCaaa                              <  2:312494/130‑1 (MQ=255)

                                                                                                                  tGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGa                    <  1:773893/140‑1 (MQ=255)

                                                                                                                  tGCGCTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGa                    <  1:1421261/140‑1 (MQ=255)

                                                                                                                    cgcTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATa                  >  2:1028694/1‑140 (MQ=255)

                                                                                                                    cgcTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATa                  >  1:568767/1‑140 (MQ=255)

                                                                                                                    cgcTTTATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATa                  >  1:151608/1‑140 (MQ=255)

                                                                                                                       tttATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAGaa               <  1:1028694/140‑1 (MQ=255)

                                                                                                                       tttATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAGaa               <  2:1382985/140‑1 (MQ=255)

                                                                                                                        ttATTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAGAAc              <  2:1052140/140‑1 (MQ=255)

                                                                                                                          aTTTTACAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAGAACGa            <  1:71965/140‑1 (MQ=255)

                                                                                                                               aCAACTCTGCCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAGAACGATGTTg       <  2:1238371/140‑1 (MQ=255)

                                                                                                                                    tctgcctgGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAGAACGATGTTGCAACa  <  1:87974/140‑1 (MQ=255)

                                                                                                                                    tctgcctgGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAGAACGATGTTGCAACa  <  2:740227/140‑1 (MQ=255)

GATTAACCACAATCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGTCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAGAACGATGTTGCAACA  >  NC_000913/1833855‑1834126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`