| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,718,194 | T→C | I68V (ATT→GTT) | mliC ← | inhibitor of c‑type lysozyme, putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,718,194 | 0 | T | C | 100.0% | 61.6 / NA | 19 | I68V (ATT→GTT) | mliC | inhibitor of c‑type lysozyme, putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (12/7); total (12/7) | |||||||||||
ACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAGTTTGACCGTCAACGGTTTTTCATCACACTGGTATTCCAGCGTATCGGTTTGCATGCGCTCAAC > NC_000913/1718069‑1718323 | aCGCTGTGCATTTTGCAAATGACAGTTATTTAAGACGATGCGGTCGCATTTATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGt < 1:160222/133‑1 (MQ=255) tgtgGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAACGc > 2:305599/1‑124 (MQ=255) gATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGTTTGAGATg < 2:450167/133‑1 (MQ=255) tGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGGGCCAGAGGGTGAAACGCCCTGTTTGGGATGCAGTAGTTGAt > 2:156179/1‑133 (MQ=255) gCGGTCGCGTTTATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGAcc < 2:437393/133‑1 (MQ=255) cAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGTTTGAGATGCAGTAGGTGATTATCTTAACCAAAACTGACCTTCTGGTGCGGattatt > 2:179596/1‑133 (MQ=255) tCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAg > 1:343885/1‑133 (MQ=255) tCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAg > 2:414031/1‑133 (MQ=255) tAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAGTTTGACCGTCAACGGTTTTTCATCACACt < 1:365254/133‑1 (MQ=255) ttCCGTCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGTTTATTCAGTTTGTCCGACAACGGTTTTTCATCACACTGGTa > 2:219475/1‑133 (MQ=255) ttCCGTCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAGTTTGACCGTCAACGGTTTTTCATCACACTGGt < 1:416398/132‑1 (MQ=255) ttCCGTCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAGTTTGACCGTCAACGGTTTTTCATCACACTGGt > 2:416398/1‑132 (MQ=255) gTCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAGTTTGACCGTCAACGGTTTTTCATCACACTGGTATTcc > 1:472686/1‑133 (MQ=255) gTCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAGTTTGACCGTCAACGGTTTTTCATCACACTGGTATTcc > 1:57687/1‑133 (MQ=255) tCAGTGTAACGCGCGCCAGAGGCTGAAACGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATGCAGTTTGAGCGTGAACGGTTTTTCAACACAGTGGTATTCCa > 2:200067/1‑133 (MQ=255) gtAACGCGTGCCAGAGGCTGAACCGCCCTGGTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAGTTTGACCGTCAACGGTTTTTCATCACACTGGTATTCCAGCGTa < 1:200067/133‑1 (MQ=255) gcCAGAGGCTGAAACGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAGTTTGACCGTCAACGGTTTTTCATCACACTGGTATTCCAGCGTATCGGTTTGc > 1:360132/1‑133 (MQ=255) agGCTGAAACGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAGTTTGACCGTCAACGGTTTTTCATCACACTGGTATTCCAGCGTATCGGTTTGCATgcg > 1:276342/1‑133 (MQ=255) aaaCGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAGTTTGACCGTCAACGGTTTTTCATCACACTGGTATTCCAGCGTATCGGTTTGCATGCGCTCAAc < 2:360132/133‑1 (MQ=255) | ACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAGTTGATTATCGTAAACAAAACTGACCTCCTGGCGCGGATTATTCAGTTTGACCGTCAACGGTTTTTCATCACACTGGTATTCCAGCGTATCGGTTTGCATGCGCTCAAC > NC_000913/1718069‑1718323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |