| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,976,103 | G→A | S51S (AGC→AGT) | motB ← | motility protein B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,976,103 | 0 | G | A | 100.0% | 25.6 / NA | 9 | S51S (AGC→AGT) | motB | motility protein B |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/4); total (5/4) | |||||||||||
TGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGTCGCCAGTGGAGTCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCAGCCACATCACCAGAAAAAAGGCCATCATCGCAGTCATAAAGTCGGCATAAGCAATCTTCCACGATCCATGTGCTGCCCCGTGGCTTTTGGC > NC_000913/1975975‑1976210 | tGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGTCGCCAGTGGAGTCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGACtgg < 1:369763/133‑1 (MQ=255)tGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGTCGCCAGTGGAGTCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGACtgg > 1:373654/1‑133 (MQ=255) cgccgGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGTCGCCAGTGGAGTCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGACTGGAGATGGAGATCAGCCACATCACCAg > 2:451593/1‑133 (MQ=255) tCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGTCGCCAGTGGAGTCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGACTGGAGATGGAGATCAGCCACATCACCAGAAAAAAGGCCATCATCg < 2:373654/133‑1 (MQ=255) aaaTGCGATCGCCGCCCGTAACCGCAGTCGCCAGTGGAGTCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGACTGGAGATGGAGATCAGCCACATCACCAGAAAAAAGGCCATCATCGCAGTCATaaa > 1:318688/1‑133 (MQ=255) gCGATCGCCGCCCGTAACCGCAGTCGCCAGTGGAGTCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGACTGGAGATGGAGATCAGCCACATCACCAGAAAAAAGGCCATCATCGCAGTCATAAAGTCg > 2:91694/1‑133 (MQ=255) gATCGCCGCCCGTAACCGCAGTCGCCAGTGGAGTCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGACTGGAGATGGAGATCAGCCACATCACCAGAAAAAAGGCCATCATCGCAGTCATAAAGTCGGc < 1:451593/133‑1 (MQ=255) cGCAGTCGCCAGTGGAGTCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGACTGGAGATGGAGATCAGCCACATCACCAGAAAAAAGGCCATCATCGCAGTCATAAAGTCGGCATAAGCAATCTTCCAc < 1:388292/133‑1 (MQ=255) ccGCAATCTGAATCAGCTCTTTTGGACTGGAGATGGAGATCAGCCACATCACCAGAAAAAAGGCCATCATCGCAGTCATAAAGTCGGCATAAGCAATCTTCCACGATCCATGTGCTGCCCCGtggcttttggc > 1:374309/1‑133 (MQ=255) | TGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGTCGCCAGTGGAGTCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCAGCCACATCACCAGAAAAAAGGCCATCATCGCAGTCATAAAGTCGGCATAAGCAATCTTCCACGATCCATGTGCTGCCCCGTGGCTTTTGGC > NC_000913/1975975‑1976210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |