| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 277,660 | T→G | intergenic (+13/+96) | mmuM → / ← afuC | homocysteine S‑methyltransferase/CP4‑6 prophage; ABC transporter ATP‑binding protein AfuC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 277,660 | 0 | T | G | 100.0% | 33.6 / NA | 11 | intergenic (+13/+96) | mmuM/afuC | homocysteine S‑methyltransferase/CP4‑6 prophage; ABC transporter ATP‑binding protein AfuC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (4/7); total (4/7) | |||||||||||
ATTGCGCGCAGCTGGCGGATTATCTGCCGCAGTGGCAGGCCGCTGGCGCACGGTTGATTGGCGGGTGCTGTCGCACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCG > NC_000913/277532‑277786 | aTTGCGCGCAGCTGGCGGATTATCTGCCGCAGTGGCAGGCCGCTGGCGCACGGTTGATTGGCGGGTGCTGTCGCACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGGCTAc < 2:384294/133‑1 (MQ=255) ttGCGCGCAGCTGGCCGATTATCTTCCGAAGTGGCAGGCCGATGGCGCACGGTTGATTGGCGGGTGCTGTCGCACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGGCTACa < 2:166047/133‑1 (MQ=255) ggATTATCTGCCGCAGTGGCAGGCCGCTGGCGCACGGTTGATTGGCGGGTGCTGTCGCACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGGCTACATCGTTCATTGTAGGc < 1:89108/133‑1 (MQ=255) ggCAGGCCGCTGGCGCACGGTTGATTGGCGGGTGCTGTCGCACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGGCTACATCGTTCATTGTAGGCCTGATAAgcgcagcgca < 2:473587/133‑1 (MQ=255) gTCGCGCCACGCCTGAGGATATTGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGGCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATc < 1:250054/133‑1 (MQ=255) cGCACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGGCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCg < 1:380066/133‑1 (MQ=255) gCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGGCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc > 2:408398/1‑133 (MQ=255) cGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGGCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACca > 1:480802/1‑133 (MQ=255) aaGCTGAGGGTTTATCGGGGCTTCATCGTTTATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAg < 1:182766/133‑1 (MQ=255) aaGCTGAGGGTTTATCGGGGCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAg > 1:325569/1‑133 (MQ=255) aTCGGGGCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCg > 1:111054/1‑133 (MQ=255) | ATTGCGCGCAGCTGGCGGATTATCTGCCGCAGTGGCAGGCCGCTGGCGCACGGTTGATTGGCGGGTGCTGTCGCACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCG > NC_000913/277532‑277786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |