| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,646,583 | (G)6→7 | coding (743/2313 nt) | pbpC ← | peptidoglycan glycosyltransferase PbpC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,646,577 | 1 | . | G | 94.7% | 1052.5 / 39.3 | 299 | coding (749/2313 nt) | pbpC | peptidoglycan glycosyltransferase PbpC |
| Reads supporting (aligned to +/- strand): ref base . (8/8); new base G (113/170); total (121/178) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 335 total aligned reads displayed.
TGGCAACCGCCCTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑G‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGCCAACGATCCGGGCGAAG > NC_000913/2646438‑2646710 | tGGCAACCGCCCTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAATAGCGGTGCCTGTTGCGGCATTTGTc > 1:3526150/1‑140 (MQ=255)tGGCAACCGCCCTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTc > 2:3926812/1‑140 (MQ=255) gCAACCGCCCTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑g‑g < 2:1035552/140‑1 (MQ=255) gCAACCGCCCTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑g‑g < 1:6705323/140‑1 (MQ=255) gCAACCGCCCTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑g‑g < 1:917339/140‑1 (MQ=255) aCCGCCCTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑g‑gg‑gg > 1:654886/1‑140 (MQ=255) ccTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAGACAGCGGAGCCAGTGGCGGCAGTTGTC‑g‑gg‑gg‑ggcca > 1:3651666/1‑136 (MQ=255) tttCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑gccagc < 2:1488921/140‑1 (MQ=255) tttCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑gccagc < 2:6752478/140‑1 (MQ=255) tCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑gccagcca > 1:6097759/1‑140 (MQ=255) aGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGAt < 1:3926812/140‑1 (MQ=255) tttGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATggg < 2:6613819/140‑1 (MQ=255) tttGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATggg > 2:5977590/1‑140 (MQ=255) tGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGtt > 1:1328903/1‑140 (MQ=255) tGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGtt < 1:1702098/140‑1 (MQ=255) tGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGAGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGtt < 2:1798364/140‑1 (MQ=255) gcgcCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGttc < 2:1223766/140‑1 (MQ=255) gcgcCAGTTCTTCCAGACGTCGGTGAAGACCTGCACCCACCGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGttc < 2:3088220/140‑1 (MQ=255) cgcCAGTTGTTCCAGAGGTCGTGGAAGACCGCCATACAACGTAGTAGTCATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGttct < 2:3417845/140‑1 (MQ=255) cgcCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGttct > 2:316313/1‑140 (MQ=255) cgcCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGCAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGttct > 2:6182567/1‑140 (MQ=255) cgcCAGTTCTTCCAGACATCGTAGAAGACCGACATTCAACGTAGTAGTTATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGttct < 2:3221335/140‑1 (MQ=255) gTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGACATTTGTC‑G‑GGAGG‑TCCAGCCGGATGGGTTCTTCCCt > 1:3316622/1‑140 (MQ=255) ttcttcCATACGTCGTGTAAGAGCGGCATCCAACGTAGTAGTGATTTTCTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCtt < 2:3651382/140‑1 (MQ=255) ttcttcCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCtt < 1:5662245/140‑1 (MQ=255) tcttcCAGACGTCGTTGCAGACAGGCATCCAGCGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTg < 2:3315583/140‑1 (MQ=255) tcttcCAGACGTCGTTGAAGACGGGCATCCACCGTTGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTg < 2:2299266/140‑1 (MQ=255) tcttcCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTg < 1:1211030/140‑1 (MQ=255) tcttcCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTg < 2:7168395/140‑1 (MQ=255) tcttcCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTg < 2:625312/140‑1 (MQ=255) tcttcCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTg < 1:2019880/140‑1 (MQ=255) tcttcCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTCCCCTTg < 2:7002827/140‑1 (MQ=255) tcCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGAct < 1:316313/140‑1 (MQ=255) aCGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTg < 2:7377381/132‑1 (MQ=255) cgtcgtTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCtt > 1:6404895/1‑130 (MQ=255) cgtcgtTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTg > 2:1857040/1‑131 (MQ=255) cgtcgtTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTg < 1:1857040/131‑1 (MQ=255) gtcgtTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTAc < 1:5455048/140‑1 (MQ=255) gtcgtTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTAc < 2:5809741/140‑1 (MQ=255) cgtTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCt < 2:1144105/140‑1 (MQ=255) cgtTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGATCTTCCTTTGACTCTTTTACCt > 1:2208562/1‑140 (MQ=255) cgtTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑G‑GG‑GGAGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCt > 1:2466787/1‑140 (MQ=255) cgtTGAAGACCGGCAACCAACGTAGTAGTCATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCt < 1:2269654/140‑1 (MQ=255) tGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCt < 2:504841/140‑1 (MQ=255) aaGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCa < 2:5750265/140‑1 (MQ=255) gACCTGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGCTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg < 2:4536895/140‑1 (MQ=255) gACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg < 2:6095117/140‑1 (MQ=255) gACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg < 2:1328903/140‑1 (MQ=255) gACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg < 1:7247826/140‑1 (MQ=255) gACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTCTGCGTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg < 2:2749527/140‑1 (MQ=255) aCCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACgg < 2:6920539/140‑1 (MQ=255) aCCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACgg > 2:443777/1‑140 (MQ=255) ccGGCATCCAACGTATTAGTGACTTCGTCCCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACggg < 1:2300753/140‑1 (MQ=255) cGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGa > 1:308179/1‑140 (MQ=255) cATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACca < 2:7300907/140‑1 (MQ=255) cATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACca < 1:4614784/140‑1 (MQ=255) ccAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACcacac < 2:1685143/140‑1 (MQ=255) cAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACcacaca < 1:6339923/140‑1 (MQ=255) cAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACcacaca < 2:6399946/140‑1 (MQ=255) cAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACcacaca < 2:5492704/140‑1 (MQ=255) gtagtGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg > 2:1729881/1‑123 (MQ=255) gtagtGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCa < 2:4969023/140‑1 (MQ=255) tagtGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg > 1:4943183/1‑122 (MQ=255) tagtGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCAc > 1:5398474/1‑140 (MQ=255) tagtGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCAc > 1:55562/1‑140 (MQ=255) tagtGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTATTTTACCTGCACACGCGACCACACACCTTGCAc > 2:3318869/1‑140 (MQ=255) tGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGc > 2:5411569/1‑140 (MQ=255) gATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGTCTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGcc < 1:5728742/140‑1 (MQ=255) aTTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCa > 1:6020394/1‑140 (MQ=255) aTTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGCGACCACACACCTTGCACGGCCa > 1:2810163/1‑140 (MQ=255) ttttGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCAt > 1:6579103/1‑140 (MQ=255) tttGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATc < 2:4898170/140‑1 (MQ=255) gTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGt > 1:7343291/1‑140 (MQ=255) gTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGt > 1:5066315/1‑140 (MQ=255) gacaggcttttACCGATCATCATGCGCGAACTCCGCGGTTCCAGTTGCGGCATTTGTC‑GTGG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa < 2:3608300/135‑1 (MQ=255) cttttgcttttACCGAGCATCATGCGCGAAATCAGGGGTGCCAGTTGCTGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa < 2:2209320/140‑1 (MQ=255) cttttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa < 2:4033797/140‑1 (MQ=255) cttttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa < 1:7086146/140‑1 (MQ=255) cttttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa < 1:443777/140‑1 (MQ=255) ttttggctttTCCGAGCATCCTGCGCGAAAACAGCGGTGCCAGTTGCCGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGGCTCTTTTACCCGCTCCCGGGGCCACACACCTTGCACGGCCATCCGTTCGAg < 2:654886/140‑1 (MQ=255) ttttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAg < 1:4111341/140‑1 (MQ=255) tgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCAc < 1:6054649/140‑1 (MQ=255) cGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTAcg < 1:5267943/140‑1 (MQ=255) aGCATCATGCGCGAATACAGCGGTGTCAGTTGCGGCAGTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTAcgcg < 1:3421231/140‑1 (MQ=255) aGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTAcgcg < 2:7231598/140‑1 (MQ=255) aGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTAcgcg > 1:4509108/1‑140 (MQ=255) aGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTAcgcg < 2:5633080/140‑1 (MQ=255) aGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGAGACCACACACCTTGCACGGCCATCCGTTCGa > 2:5166001/1‑125 (MQ=255) tcatGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGc < 1:4346167/140‑1 (MQ=255) catGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCt < 2:3752732/140‑1 (MQ=255) catGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCt > 1:1270179/1‑140 (MQ=255) tGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTc > 1:5009576/1‑140 (MQ=255) gAAAACAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCAc > 2:5070864/1‑140 (MQ=255) aaCAGCGGTTGCAGTTGGGGCACTTGTCGG‑GG‑GG‑GTCAGTCAGATGGGGTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCt < 2:2670522/140‑1 (MQ=255) aaCAGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCt < 1:1158347/140‑1 (MQ=255) aGCGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGTCTCTTTTTCCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCg < 2:4154946/140‑1 (MQ=255) aGCGGTGCCAGTTGCGGCATTTGTC‑G‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCTCACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCt > 2:4383727/1‑136 (MQ=255) cGGTGCCAGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGc > 2:798000/1‑140 (MQ=255) aGTTGCGGCATTTGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGCCAACGAt < 1:3808159/140‑1 (MQ=255) tttGTCGG‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGCCAACGATCCGGGCGAAg > 1:1768130/1‑140 (MQ=255) | TGGCAACCGCCCTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑G‑GG‑GG‑GCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGCCAACGATCCGGGCGAAG > NC_000913/2646438‑2646710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |