| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 77,309 | A→G | intergenic (‑10/‑58) | sgrR ← / → sgrS | DNA‑binding transcriptional dual regulator SgrR/small regulatory RNA SgrS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 77,309 | 0 | A | G | 99.8% | 1474.4 / NA | 413 | intergenic (‑10/‑58) | sgrR/sgrS | DNA‑binding transcriptional dual regulator SgrR/small regulatory RNA SgrS |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (177/235); minor base T (0/1); total (177/236) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 424 total aligned reads displayed.
GGGTGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAACTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGCGAAGTTGTGCTGGTTGCGTT > NC_000913/77173‑77445 | gggTGCGCATATGACGACGCGACCAGCTCAATAACTCTGTCAGTTCGTCGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTc < 2:2208350/140‑1 (MQ=255) ggTGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTcc > 2:5972429/1‑140 (MQ=255) ggTGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTcc > 2:5669441/1‑140 (MQ=255) ggTGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTcc > 2:786350/1‑140 (MQ=255) ggTGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTcc > 2:6145823/1‑140 (MQ=255) ggTGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTcc > 2:6941776/1‑140 (MQ=255) ggTGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTcc > 1:6850558/1‑140 (MQ=255) ggTGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTcc > 2:4993374/1‑140 (MQ=255) ggTGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGGTGTTGCAGACGCGCCGATGGCGTAAAAGGGGAGCTcc > 1:3023125/1‑140 (MQ=255) gTGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCt < 1:5341687/140‑1 (MQ=255) gTGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCt < 1:459981/140‑1 (MQ=255) gTGCGCATATGACGACGCGAGCAGCGCAACAACGCTGTCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCt < 1:3078901/140‑1 (MQ=255) tGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCtg > 1:6705682/1‑140 (MQ=255) cgcATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTCTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGCTGGACTGTTATTGTAGATGGGCAGAGTGCGTAAAAGGGGACGCCCtgtg > 2:3644953/1‑140 (MQ=255) cATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCa < 1:515650/140‑1 (MQ=255) cATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCa < 2:6321345/140‑1 (MQ=255) cATATGACGACGCGACCAGCTCCATCACGATGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCa < 1:2442268/140‑1 (MQ=255) tGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTc > 2:5062725/1‑129 (MQ=255) tGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAg > 1:7303350/1‑140 (MQ=255) gacgCGAGCAGCTCACTAACGCCGCTAGTTCGTTGAGTGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAg < 1:2137059/140‑1 (MQ=255) agcTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAattttat < 2:4492401/140‑1 (MQ=255) gcTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAattttatt < 1:179388/140‑1 (MQ=255) gcTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAattttatt < 2:3895188/140‑1 (MQ=255) aaTAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTTCAAAAGACAGCAATTTTATTTTcc < 1:204521/140‑1 (MQ=255) aaTAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTcc < 1:7053185/140‑1 (MQ=255) aaTAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTcc < 1:3886246/140‑1 (MQ=255) aaTAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTcc < 1:7332086/140‑1 (MQ=255) aaTAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTcc < 1:5669441/140‑1 (MQ=255) aaTAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTcc < 2:3972171/140‑1 (MQ=255) aaTAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATATACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTcc < 1:1022957/140‑1 (MQ=255) aaTAACGCTGCCAGTTCGTTGACCGGTGTCTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTcc < 1:2508627/140‑1 (MQ=255) aTAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTccc < 2:6850558/140‑1 (MQ=255) aTAACGCTGCCAGTTAGTTGAGAGTAGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTccc < 1:3145938/140‑1 (MQ=255) tAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCt > 2:7325754/1‑140 (MQ=255) gCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTatat < 1:1460410/140‑1 (MQ=255) cTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGGACTGATTTTGGAGACGAATAGTTGGCATAAAAGGGGGCCACCTGTGCATATCACAGCAATTTTATTTTCCCTATAtt > 2:5367650/1‑140 (MQ=255) cTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAattttattt > 1:771012/1‑130 (MQ=255) cTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAattttattt > 1:291655/1‑130 (MQ=255) cTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTc < 1:4402319/132‑1 (MQ=255) cTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATAtt < 2:27672/140‑1 (MQ=255) cTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATAtt > 2:7184399/1‑140 (MQ=255) cTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATAtt > 2:5533645/1‑140 (MQ=255) cTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATAtt > 2:6480262/1‑140 (MQ=255) cTGCCAGTTCGTTGAGCCTTGTGTCCTGCGACTTAGCCTTGCAGCATTACCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATAtt < 2:2897738/140‑1 (MQ=255) tGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCGGTGGAAAAGACAACAATAATATTTTCCCTATATTa > 2:3226007/1‑140 (MQ=255) gCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTaa < 1:4860612/140‑1 (MQ=255) gCCAGTTCGTTGAGCGGCGTGTGCTGCGATTAAACTTCGCAGCATTGCAACAGGCGGATGACCTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTaa < 2:3450260/140‑1 (MQ=255) ccAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTGCTGTGCAGAAGACAGCAATTTCATTTTCCCTATATTAAg > 2:2668684/1‑140 (MQ=255) ccAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAg > 2:6628471/1‑140 (MQ=255) ccAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAg > 2:1833463/1‑140 (MQ=255) tCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCaat > 2:7496743/1‑140 (MQ=255) ttGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAGAAGGCAGGAATTTTATCTTCCCTATATTAAGTCaataat > 2:2046713/1‑140 (MQ=255) gCGTTGTGTCCTGCGATCTACCGTCGCAGCATTGCAACAGGCGGATGACCTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCt < 2:2488683/140‑1 (MQ=255) gTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTaa < 1:5986676/140‑1 (MQ=255) tgtCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGAt < 1:5533645/140‑1 (MQ=255) gtCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATg < 1:1887312/140‑1 (MQ=255) gtCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATg < 1:332550/140‑1 (MQ=255) gtCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATg < 1:1687007/140‑1 (MQ=255) ccTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATg > 2:6526128/1‑138 (MQ=255) ccTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATg < 1:6526128/138‑1 (MQ=255) gCGATTTACCCTCGCGGCATTGACATAGGCGGATGAAGTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCa < 1:2243681/140‑1 (MQ=255) gCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCa < 2:1121629/140‑1 (MQ=255) gCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCa < 1:3939080/140‑1 (MQ=255) gCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCa < 2:4211601/140‑1 (MQ=255) tACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAggggg < 1:6176122/140‑1 (MQ=255) tACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAgggg > 2:4304310/1‑139 (MQ=255) cccTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTg > 2:4597577/1‑140 (MQ=255) tCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATCATTTCTTACGATGTAGCAAGGGGGTGccc > 1:3584794/1‑140 (MQ=255) tCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGccc > 2:3055607/1‑140 (MQ=255) gcagcaTTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGTCCCa < 2:5485095/140‑1 (MQ=255) gcagcaTTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCa < 2:5826714/140‑1 (MQ=255) caTTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCg < 2:6048674/140‑1 (MQ=255) caTTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCg > 1:6048674/1‑140 (MQ=255) ttGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTc > 2:121853/1‑140 (MQ=255) ttGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTc > 2:5166905/1‑140 (MQ=255) ccACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGt < 1:4096014/140‑1 (MQ=255) ggCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTATCGATGAAACAATGGAGTGCCCCATGCGTCAGTTTTAt > 1:3449106/1‑140 (MQ=255) ggCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAATCAAGGGGGTGCCCAATGCGTCAGTTTTAt > 1:2806020/1‑140 (MQ=255) ggCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCa < 2:1511415/126‑1 (MQ=255) ggCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTAt > 1:3756667/1‑140 (MQ=255) ggCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTAt < 1:5792776/140‑1 (MQ=255) aTGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCa < 1:5456839/140‑1 (MQ=255) tGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATGCCTAACGAGGAATCAAGGGGGTGCCTCATGGGTCAGTTTTATCAGCAc > 2:2374235/1‑140 (MQ=255) gttgCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCa < 1:6915575/130‑1 (MQ=255) tgCAGACGAGCAGATGGTATAAAAGGGGAGCTCCTCTGCGAAAGACAGTAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACcgc < 2:3124863/140‑1 (MQ=255) tgCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACcgc < 2:621960/140‑1 (MQ=255) gCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACcgcg > 2:877064/1‑140 (MQ=255) gCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACcgcg > 1:4748961/1‑140 (MQ=255) gCAGACGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGATGCACCAAGCGTCAGTGTTATCTGCACTATTTTACcgcg > 2:3339509/1‑140 (MQ=255) aCGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAg < 2:3813200/140‑1 (MQ=255) aCGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAg < 1:1545617/140‑1 (MQ=255) cGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGc > 1:6448090/1‑140 (MQ=255) cGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGc > 1:5871792/1‑140 (MQ=255) cGAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGc > 1:192764/1‑140 (MQ=255) gAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGCg > 2:4662981/1‑140 (MQ=255) gAGCAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGCg < 1:6263447/140‑1 (MQ=255) cAGATGGCATAAAAGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGCGAAg < 1:877064/140‑1 (MQ=255) aaGGGGAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGCGAAGTTGTGCTGGTTg < 2:5289148/140‑1 (MQ=255) ggggAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGCGAAGTTGTGCTGGTTGCg < 2:135446/140‑1 (MQ=255) ggggAGCTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGCGAAGTTGTGCTGGTTGCg < 1:121853/140‑1 (MQ=255) | GGGTGCGCATATGACGACGCGAGCAGCTCAATAACGCTGCCAGTTCGTTGAGCGTTGTGTCCTGCGATTTACCCTCGCAGCATTGCCACAGGCGGATGAACTGTTGTTGCAGACGAGCAGATGGCATAAAAGGGGAACTCCTGTGCAAAAGACAGCAATTTTATTTTCCCTATATTAAGTCAATAATTCCTAACGATGAAGCAAGGGGGTGCCCCATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGCGAAGTTGTGCTGGTTGCGTT > NC_000913/77173‑77445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |