BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,037,021	T→C	T378A (ACC→GCC)	hprS ←	sensory histidine kinase HprS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,037,021	0	T	C	100.0%	1701.7 / NA	456	T378A (ACC→GCC)	hprS	sensory histidine kinase HprS
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (222/234); total (222/234)

Only 100 of 460 total aligned reads displayed.

TGACTAAAGAAAGGCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGTATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTCGACCTTAAAGCAA  >  NC_000913/2036886‑2037157

tGACTAAAGAAAGGCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCa                                                                                                                                      <  1:379126/140‑1 (MQ=255)

 gACTAAAGAAAGGCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCaa                                                                                                                                     <  1:6564002/140‑1 (MQ=255)

     aaagaaagGCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCC‑AAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGaaaa                                                                                                                                <  1:5864606/140‑1 (MQ=255)

      aagaaagGCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGaaaa                                                                                                                                <  1:3738734/140‑1 (MQ=255)

      aagaaagGCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGaaaa                                                                                                                                <  1:5364196/140‑1 (MQ=255)

      aagaaagGCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGaaaa                                                                                                                                <  1:4696041/140‑1 (MQ=255)

      aagaaagGCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGaaaa                                                                                                                                >  1:4269000/1‑140 (MQ=255)

      aagaaagGCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGaaaa                                                                                                                                <  2:5582687/140‑1 (MQ=255)

      aagaaagGCCTAGTCCCTGACCTACGGAACGACGCGATTTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGaaaa                                                                                                                                <  1:3234949/140‑1 (MQ=255)

       agaaagGCCTAGTCCCTAACCTCCGGAATGATGCGAATTTTCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAAc                                                                                                                               <  2:2809021/140‑1 (MQ=255)

            ggCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAGATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGtt                                                                                                                          >  2:4739386/1‑140 (MQ=255)

            ggCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCACTATCAAGATAGCGGTTGGCATCAAGAAAACTGGtt                                                                                                                          >  2:3132133/1‑140 (MQ=255)

            ggCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGtt                                                                                                                          >  1:3978332/1‑140 (MQ=255)

                tAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTgg                                                                                                                            <  1:5000803/134‑1 (MQ=255)

                tAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTgg                                                                                                                            >  2:5000803/1‑134 (MQ=255)

                tAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATATACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTatat                                                                                                                      >  2:4638599/1‑140 (MQ=255)

                 aGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAAGATTGAGATAGCTGTTGGCATCCAGAAAACTGGTTATATg                                                                                                                     >  2:2745507/1‑140 (MQ=255)

                   tCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGaa                                                                                                                   >  1:4920426/1‑140 (MQ=255)

                     ccTGACCTACGGAATGTGGCGAATTATCTCCGCGCGAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATa                                                                                                                 <  2:3326803/140‑1 (MQ=255)

                     ccTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATa                                                                                                                 <  1:7429958/140‑1 (MQ=255)

                       tGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATAcg                                                                                                               >  2:6142665/1‑140 (MQ=255)

                        gACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGGTGTTGGCATCAAAAAAAATGGTTATATGAATAcgc                                                                                                              >  2:2226135/1‑140 (MQ=255)

                             aCGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATGAAGATAGCGGTTGGCATCAAGAAAAGTGGTTATATGAATACGCGAttt                                                                                                         >  2:3587759/1‑140 (MQ=255)

                              cGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGAtttt                                                                                                        >  2:7499554/1‑140 (MQ=255)

                               ggAATGACGCGAATTGTCTCCCCGCCAAAGTCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGAttttt                                                                                                       <  1:2917240/140‑1 (MQ=255)

                               ggAATGACGCGAATTCTCTCCCAGCAAAACTCTACGGTAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGAttttt                                                                                                       <  1:2373183/140‑1 (MQ=255)

                               ggAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGAttttt                                                                                                       <  2:6290260/140‑1 (MQ=255)

                               ggAATGACGCGAATTATCCCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGAttttt                                                                                                       <  1:5434363/140‑1 (MQ=255)

                                gAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTc                                                                                                      <  1:6787339/140‑1 (MQ=255)

                                   tGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCTATTTTTCTgg                                                                                                   >  1:1669059/1‑140 (MQ=255)

                                   tGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCt                                                                                                     <  2:239448/138‑1 (MQ=255)

                                   tGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTgg                                                                                                   >  2:6956628/1‑140 (MQ=255)

                                    gACGCGAATTATCTCGCCGCCATAAGCTAGGGAAGAGGTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGc                                                                                                  <  1:3535832/140‑1 (MQ=255)

                                    gACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGc                                                                                                  <  2:1246541/140‑1 (MQ=255)

                                    gACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGc                                                                                                  <  2:1055598/140‑1 (MQ=255)

                                      cgcgAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGa                                                                                                <  2:6033162/140‑1 (MQ=255)

                                      cgcgAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGa                                                                                                <  2:7317862/140‑1 (MQ=255)

                                        cgAATTATCTCCCCGCCAAAATCTACGGATGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAat                                                                                              <  1:2208763/140‑1 (MQ=255)

                                        cgAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAat                                                                                              <  1:119331/140‑1 (MQ=255)

                                         gAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAata                                                                                             <  1:6210720/140‑1 (MQ=255)

                                             tATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTa                                                                                         <  1:1057642/140‑1 (MQ=255)

                                             tATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTa                                                                                         <  1:391400/140‑1 (MQ=255)

                                              ttttcCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCTTTAATTTTGGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAGCTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTaa                                                                                        <  2:2453464/137‑1 (MQ=255)

                                                    ccGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGa                                                                                                <  2:7028664/126‑1 (MQ=255)

                                                     cGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATTTCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATACGAATACGCGATCTTTCTGGCGCATATCTAATGGCAtt                                                                                 >  1:2680187/1‑140 (MQ=255)

                                                     cGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCAtt                                                                                 >  1:6475993/1‑140 (MQ=255)

                                                     cGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCAtt                                                                                 <  1:135289/140‑1 (MQ=255)

                                                     cGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCAtt                                                                                 >  1:336071/1‑140 (MQ=255)

                                                     cGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCAtt                                                                                 >  1:4873475/1‑140 (MQ=255)

                                                     cGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCAtt                                                                                 >  1:5133986/1‑140 (MQ=255)

                                                     cGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCAtt                                                                                 <  1:2815528/140‑1 (MQ=255)

                                                          aaaTCTACGGAAGAGCTTTTCAGGCTCATCAATTTTCTTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACaa                                                                            <  1:3009178/140‑1 (MQ=255)

                                                           aaTCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAAt                                                                           >  2:5399948/1‑140 (MQ=255)

                                                           aaTCAACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAAt                                                                           <  2:666328/140‑1 (MQ=255)

                                                             tCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATaa                                                                         <  2:4920426/140‑1 (MQ=255)

                                                                 cGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGAtt                                                                     <  1:759533/140‑1 (MQ=255)

                                                                    aaGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGa                                                                  <  2:1405328/140‑1 (MQ=255)

                                                                    aaGAGTTTTTCAGGCCGATTAA‑TTTCGTTCCAGAGCTGGTGATATCAACATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGAt                                                                 <  2:3414037/140‑1 (MQ=255)

                                                                      gagTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATa                                                                >  1:1883255/1‑140 (MQ=255)

                                                                       agTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATaa                                                               >  2:5769360/1‑140 (MQ=255)

                                                                       agTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATaa                                                               >  1:5621443/1‑140 (MQ=255)

                                                                         tttttCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGACATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACa                                                             >  2:5887460/1‑140 (MQ=255)

                                                                              cAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATaa                                                                         >  2:2636115/1‑123 (MQ=255)

                                                                              cAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGt                                                        <  1:316795/140‑1 (MQ=255)

                                                                                ggCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTg                                                      <  1:6073388/140‑1 (MQ=255)

                                                                                ggCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTg                                                      <  1:7021675/140‑1 (MQ=255)

                                                                                ggCTCATTAATTTTCGTTCCAGGGCAGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTg                                                      <  1:2549450/140‑1 (MQ=255)

                                                                                    cATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTgtagt                                                  >  2:1787847/1‑140 (MQ=255)

                                                                                             tCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTg                                                      >  2:4029361/1‑127 (MQ=255)

                                                                                             tCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTg                                                      >  2:1896221/1‑127 (MQ=255)

                                                                                               gTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATc                                       >  2:3789110/1‑140 (MQ=255)

                                                                                               gTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATc                                       >  2:3961693/1‑140 (MQ=255)

                                                                                                   cAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCa                                   <  1:4354366/140‑1 (MQ=255)

                                                                                                     gggCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTgtagt                                                  <  2:7242029/123‑1 (MQ=255)

                                                                                                     gggCTGGCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTgtagt                                                  >  1:7242029/1‑123 (MQ=255)

                                                                                                           gCGATATCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTg                           >  2:1557529/1‑140 (MQ=255)

                                                                                                               tatCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGa                       <  2:307117/140‑1 (MQ=255)

                                                                                                               tatCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGa                       <  1:1434969/140‑1 (MQ=255)

                                                                                                                 tCAATATTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGAtt                     <  2:4460967/140‑1 (MQ=255)

                                                                                                                      atTAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACt                <  2:6419460/140‑1 (MQ=255)

                                                                                                                      atTAAGATAGCTGTTCGCATCACGACAACCGGTTATACGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACt                <  1:2017640/140‑1 (MQ=255)

                                                                                                                       ttAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTc               <  2:4269000/140‑1 (MQ=255)

                                                                                                                       ttAAGATAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTc               <  1:4119429/140‑1 (MQ=255)

                                                                                                                            aTAGCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTCGACCt          <  2:4229253/140‑1 (MQ=255)

                                                                                                                            aTAGCTGTTGGCATCAACAAAAGTGGTTATACGAACACGCGATTTTTCCGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTCGACCt          <  2:2035252/140‑1 (MQ=255)

                                                                                                                               gCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTc               >  2:5280300/1‑132 (MQ=255)

                                                                                                                               gCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTc               <  1:5280300/132‑1 (MQ=255)

                                                                                                                               gCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTCGACCTTaa       >  1:5565825/1‑140 (MQ=255)

                                                                                                                               gCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTCGACCTTaa       >  2:652557/1‑140 (MQ=255)

                                                                                                                               gCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTCGACCTTaa       >  1:5749907/1‑140 (MQ=255)

                                                                                                                               gCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTCGACCTTaa       >  2:4844719/1‑140 (MQ=255)

                                                                                                                               gCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTCGACCTTaa       >  1:4539690/1‑140 (MQ=255)

                                                                                                                               gCTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTAGTAGTAAAATTTGATCAGCAAAGATTTGCTAATTGCACTCGACCTTaa       >  2:2165232/1‑140 (MQ=255)

                                                                                                                                cTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTCGACCTTaaa      >  2:5829444/1‑140 (MQ=255)

                                                                                                                                cTGTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAAGTTTTTCCACAAAGATTGGCTGTTTGCACTCGACCTTaaa      >  2:2016900/1‑140 (MQ=255)

                                                                                                                                 tGTTGGCATCAAGAAAATTGGTAATATGAATTCGCTATTTTTCTGGCGCATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTCGACCTTAAAg     <  2:2982137/140‑1 (MQ=255)

                                                                                                                                  gTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTc               >  1:1724188/1‑129 (MQ=255)

                                                                                                                                  gTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTc               <  2:1724188/129‑1 (MQ=255)

                                                                                                                                  gTTGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTCGACCTTAAAGc    <  2:7121341/140‑1 (MQ=255)

                                                                                                                                   ttGGCATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTATTAAAATTTAATCCGAAAGGATTTGCTGATTACACTCGACTTTAAAGcc   >  2:3702465/1‑139 (MQ=255)

TGACTAAAGAAAGGCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGTATCAAGAAAACTGGTTATATGAATACGCGATTTTTCTGGCGAATATCTAATGGCATTAACAATAAGATTCGATAACATTCGTTGTAGTAAAATTTTATCCGCAAAGATTTGCTGATTGCACTCGACCTTAAAGCAA  >  NC_000913/2036886‑2037157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`