| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,074,704 | C→T | intergenic (+46/‑75) | flu → / → yeeR | CP4‑44 prophage; self recognizing antigen 43 (Ag43) autotransporter/CP4‑44 prophage; inner membrane protein YeeR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,074,704 | 0 | C | T | 99.7% | 1288.8 / NA | 373 | intergenic (+46/‑75) | flu/yeeR | CP4‑44 prophage; self recognizing antigen 43 (Ag43) autotransporter/CP4‑44 prophage; inner membrane protein YeeR |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (158/213); minor base G (1/0); total (160/213) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 378 total aligned reads displayed.
CCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCTTT > NC_000913/2074567‑2074839 | cccTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTgg > 2:1772512/1‑140 (MQ=255) cTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGAc < 1:3768973/140‑1 (MQ=255) tGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGAcc > 1:4163597/1‑140 (MQ=255) gggCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCg > 1:4591835/1‑140 (MQ=255) gggCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCg > 2:6978389/1‑140 (MQ=255) ggCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTTCCGATCATCATGAGCGGGACCTGGACCgg > 1:3490494/1‑140 (MQ=255) ggCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCgg > 2:5710728/1‑140 (MQ=255) gTTCAGGCCGGTTATGCTCACACCGTCAGCGTCAGCAGCGCTGAAGGGCATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGgcgc < 2:2196413/140‑1 (MQ=255) gTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGgcgc < 2:6598837/140‑1 (MQ=255) gTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGgcgc < 1:5468125/140‑1 (MQ=255) tCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCaa > 1:7476763/1‑140 (MQ=255) cAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAAc > 1:682082/1‑140 (MQ=255) ggCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACgg < 1:6978389/140‑1 (MQ=255) gTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCtt < 1:401989/140‑1 (MQ=255) ttATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGAGCGGTACATGGACCGGCGCAACGGATCTTc > 1:2493238/1‑140 (MQ=255) ttATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTc > 2:5463314/1‑140 (MQ=255) aGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACAt > 2:1450852/1‑140 (MQ=255) gTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCg < 1:6194038/140‑1 (MQ=255) tCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCg > 2:1212252/1‑139 (MQ=255) tCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGc > 2:7206149/1‑140 (MQ=255) cAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCt > 1:2946334/1‑140 (MQ=255) cAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCt < 1:5710728/140‑1 (MQ=255) cAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCt < 2:6343046/140‑1 (MQ=255) aGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTg < 1:4734052/140‑1 (MQ=255) gcagcaGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAt > 1:1536623/1‑140 (MQ=255) gcagcaGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAt < 2:7293104/140‑1 (MQ=255) gcagcaGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGAACTTCAACGCCACATCCGCTGGCAt > 2:7523630/1‑140 (MQ=255) gcagcaGCGCTGAAGGGGATAACGGTCAGGCTACAGTGACTGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAt < 2:2855467/140‑1 (MQ=255) gcagcaGCGCTGAAGCGTATAAGGGTCAGCCCACACTCAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAt < 1:2064266/140‑1 (MQ=255) cagcagCGCTGAAGGGTCTAACAGTCAGGCCGCGCCGAAGGTGACCTTATGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAtt < 2:3698993/140‑1 (MQ=255) cagcagCGCTGAAGGGTATAACGGTCAGGCCGCACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAtt < 1:146083/140‑1 (MQ=255) cagcagCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAtt < 1:6105102/140‑1 (MQ=255) cagcagCGATGAAGGGCGTAACGGTCAGGCGCCCCTGAAAGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAtt < 2:3490494/140‑1 (MQ=255) gcagcGCTGAAGGGTATAACGGCCAGGCCACTCTGCATGCGACCTTCTTACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTaa < 2:2330702/140‑1 (MQ=255) cagcGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAAc < 2:4591835/140‑1 (MQ=255) gcgcTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACaa < 2:5558390/140‑1 (MQ=255) cgcTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAAt < 1:4933771/140‑1 (MQ=255) gcTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATa < 1:5627202/140‑1 (MQ=255) gcTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATa < 2:1646741/140‑1 (MQ=255) gcTGAAGGGTATAACGGGCAGGCCACACTGATTGTGACCGTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATa < 2:2736463/140‑1 (MQ=255) gAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACa < 2:5635437/140‑1 (MQ=255) aGGGTATAACGGTCATGCCACACTGAATGTGACCTTCAGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATg < 1:2962558/140‑1 (MQ=255) tataACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGatat < 2:1536623/140‑1 (MQ=255) taACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATtc > 2:4444547/1‑140 (MQ=255) cGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATtcatc > 2:3960040/1‑140 (MQ=255) ggTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATtcatca < 1:7206149/140‑1 (MQ=255) ggTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATtcatca < 2:4784429/140‑1 (MQ=255) ggTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATtcatca < 2:5079675/140‑1 (MQ=255) ggTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATtcatca < 2:5952778/140‑1 (MQ=255) gTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCAc > 2:7080718/1‑140 (MQ=255) tCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCAGATTCGCTCGCACTAACAATAAAATGATATTCATCACg > 1:3404540/1‑140 (MQ=255) tCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACg > 1:7082123/1‑140 (MQ=255) cAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACgg > 1:7427591/1‑140 (MQ=255) cAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACgg < 2:4948579/140‑1 (MQ=255) aGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGa < 1:169792/140‑1 (MQ=255) aGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGa > 1:1128646/1‑140 (MQ=255) aGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACAATCGCTGGTATTAACCATAACACGATATTCATCACGGa > 1:3099595/1‑140 (MQ=255) gCCACTCTGAATGTGACCTTCTTACTGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGt < 1:3652708/140‑1 (MQ=255) gCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGt > 2:6651868/1‑140 (MQ=255) gCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGt < 2:5216184/140‑1 (MQ=255) gCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGt < 1:4306603/140‑1 (MQ=255) cacaCTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGa < 1:4658437/140‑1 (MQ=255) cacaCTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGa < 1:1591404/140‑1 (MQ=255) cacTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACt < 1:6561242/140‑1 (MQ=255) cacTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACt < 2:6126373/140‑1 (MQ=255) cacTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACt < 2:65460/140‑1 (MQ=255) cacTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACt < 2:210045/140‑1 (MQ=255) cacTGAATGTGACCTTCTGACACAACCATCGCCTCTCCGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACt < 1:2327828/140‑1 (MQ=255) cacTGAATGTGACCTCCTGACAGAAACATAGCCTCTCAGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACt < 1:2630866/140‑1 (MQ=255) acTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGa > 2:4652760/1‑137 (MQ=255) gAATGTGACCTTCTGACGGAACTATCGCCTCGCGGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGt < 2:3344125/140‑1 (MQ=255) gACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGa < 1:4799791/128‑1 (MQ=255) gACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACt > 1:5433353/1‑130 (MQ=255) aCCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACt < 2:3837812/129‑1 (MQ=255) aCCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGAt > 1:1002539/1‑140 (MQ=255) aCCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGAt > 1:5265380/1‑140 (MQ=255) tCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACGTGATATTGATCGCGAAGTGACGATGTTACAGATAGTc > 1:1941851/1‑140 (MQ=255) cTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCg < 2:6482865/140‑1 (MQ=255) tGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCgg < 2:7323409/140‑1 (MQ=255) aCAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGCGACTATGTTACAGATAGTCGgcg > 2:4470831/1‑140 (MQ=255) aGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcgcg < 2:4278826/140‑1 (MQ=255) aGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcgcg < 2:4125014/140‑1 (MQ=255) aGAACCATCGCCTCTCTATGGTCCCGGTCATGATGTCCGTGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcgcg < 2:2556698/140‑1 (MQ=255) gAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcgcgc < 2:7438271/140‑1 (MQ=255) aaCCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTTATCACGGGGTGTCTGTGTTACAGATAGTCGGCGCGCt > 1:2157659/1‑140 (MQ=255) aaCCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCt > 1:6666699/1‑140 (MQ=255) aTCGCCTCTCTGTGGTCTCGGTCATCATGACCGGGACCTAGACCGGCGGAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATc < 2:2949061/140‑1 (MQ=255) cGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCct > 1:5852992/1‑140 (MQ=255) ctctctGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCctgct < 2:6851827/140‑1 (MQ=255) ctctctGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCctgct < 1:6460808/140‑1 (MQ=255) tctctGTGGTCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATGCATCACGGCGTGCCTAGGTTACAGAGAGTCTGCGCGCTGATCctgctg > 2:3013590/1‑140 (MQ=255) tCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGa > 1:1250304/1‑140 (MQ=255) tCCCGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACACAACGTCGGCGGGCTGATCCTGCTGATCGCAGGa > 2:3550359/1‑140 (MQ=255) ccGGTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGAtt > 1:943587/1‑140 (MQ=255) gTCATCATGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGCTAGTCGGGGCGCTGATCCTGCTGATCGCAGGATTTGc > 1:3275953/1‑140 (MQ=255) catcatGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCa > 2:5414939/1‑140 (MQ=255) catGACCGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGCTACAGATAATCGGCGCGCTGATCCTACTGATCGCAGGATTTGCCAttc > 2:3212139/1‑140 (MQ=255) tGACCGGGACCTGGACCGGCGCATCGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAttctt < 1:7523630/140‑1 (MQ=255) gACCGGGACCTGGACTGGCGCAGCGGATCTTCAACGCTACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAttcttc < 1:2745949/140‑1 (MQ=255) cGGGACCTGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGGTAGTCGGCCCGCGGATACTGCTGATAGCAGGATTTGCCATTCTTCGcc > 2:2241033/1‑140 (MQ=255) | CCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCTTT > NC_000913/2074567‑2074839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |