BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	283,415	G→A	G72D (GGC→GAC)	yagF →	CP4‑6 prophage; D‑xylonate dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	283,415	0	G	A	100.0%	699.5 / NA	205	G72D (GGC→GAC)	yagF	CP4‑6 prophage; D‑xylonate dehydratase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (106/99); total (106/99)

Only 100 of 215 total aligned reads displayed.

CGCTCTGCCGCTGACCCCGCAGATGCTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGGCATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCGTCAGCGA  >  NC_000913/283278‑283550

  ctctGCCGCTGACCCCGTAGATCCTGATGGACTCTCCCATCGGCAACCCGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATc                                                                                                                                     <  2:2018682/140‑1 (MQ=255)

      gtcGCTGACCCCGCAGAAGCTGGTGGAATCTACCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCcgcg                                                                                                                                 <  2:2516238/138‑1 (MQ=255)

      gCCGCTGACCCCGCAGATGCTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCcgcg                                                                                                                                 <  1:558607/140‑1 (MQ=255)

      gCCGCTGACCCCGCAGATGCTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCcgcg                                                                                                                                 <  2:6700612/140‑1 (MQ=255)

      gCCGCTGACCCCGCAGATGCTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCcgcg                                                                                                                                 <  1:195591/140‑1 (MQ=255)

          cTGACCCCGCAGATGCTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCgg                                                                                                                             <  1:7522595/140‑1 (MQ=255)

             aCCCCGCAGATGCTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGgaga                                                                                                                          >  2:350383/1‑140 (MQ=255)

                 cGCAGATGCTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAgacgga                                                                                                                      >  1:1296961/1‑140 (MQ=255)

                 cGCAGATGCTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAgacgga                                                                                                                      >  2:1096646/1‑140 (MQ=255)

                   cAGATGCTGATGGAATCTCCCACCGGCAATCTGTTCGCCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAgacggacg                                                                                                                    <  1:2402917/140‑1 (MQ=255)

                       tGCTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCa                                                                                                                >  1:4943189/1‑140 (MQ=255)

                        gCTGATGGAATCTCCTAGCGGCGACCTGTACGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCaa                                                                                                               <  1:2891103/140‑1 (MQ=255)

                         cTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAAt                                                                                                              >  2:6086755/1‑140 (MQ=255)

                            aTGGAATCTCCCAGCTGCAACCTGTCCGGCATGACGCCGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATcgc                                                                                                           <  1:2429881/140‑1 (MQ=255)

                            aTGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATcgc                                                                                                           <  2:781613/140‑1 (MQ=255)

                              ggAATCTCCCAGCGGCAACCTGTTCAGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCgcgc                                                                                                         >  2:5132055/1‑140 (MQ=255)

                                aaTCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTg                                                                                                       <  2:5356079/140‑1 (MQ=255)

                                aaTCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTg                                                                                                       >  1:5732668/1‑140 (MQ=255)

                                aaTCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTg                                                                                                       <  1:5090870/140‑1 (MQ=255)

                                 aTCTCCCAGCGGCAACCTGTTCGGTATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTgg                                                                                                      >  2:368681/1‑140 (MQ=255)

                                  tctcCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTggg                                                                                                     >  2:6001959/1‑140 (MQ=255)

                                  tctcCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTggg                                                                                                     >  2:1043798/1‑140 (MQ=255)

                                  tctcCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTggg                                                                                                     <  1:905542/140‑1 (MQ=255)

                                    tcCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCt                                                                                                   >  1:4061744/1‑140 (MQ=255)

                                     cccAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTa                                                                                                  <  1:1547820/140‑1 (MQ=255)

                                      ccAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTgg                                                                                                      >  1:6727960/1‑135 (MQ=255)

                                      ccAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTAc                                                                                                 >  1:3882352/1‑140 (MQ=255)

                                       cAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTAcc                                                                                                <  1:3937250/140‑1 (MQ=255)

                                          cGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGGGCCGGAGGCGGGCGCCCAATCGCGCTGGGCTACcaca                                                                                             >  1:2226178/1‑140 (MQ=255)

                                          cGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACcaca                                                                                             >  2:6819857/1‑140 (MQ=255)

                                          cGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACcaca                                                                                             <  2:3801346/140‑1 (MQ=255)

                                           ggCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCGCCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCacac                                                                                            <  1:1190220/140‑1 (MQ=255)

                                           ggCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCacac                                                                                            <  2:7032600/140‑1 (MQ=255)

                                           ggCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCacac                                                                                            <  1:6491029/140‑1 (MQ=255)

                                            gctaCCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACAcc                                                                                           <  2:4623855/137‑1 (MQ=255)

                                             cAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCg                                                                                          <  2:6652763/140‑1 (MQ=255)

                                             cAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCAACATCCGCGCCGGAGACGGACGCCCAATCGAGCTGGGCTACCACAccc                                                                                          >  2:2770245/1‑139 (MQ=255)

                                                caggTTCGGCATGACGTGGAACTCCGGGATGGGTTGGGAGGCCAACAATCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGc                                                                                       <  2:3552116/137‑1 (MQ=255)

                                                    ttCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTg                                                                                   <  2:7368336/140‑1 (MQ=255)

                                                    ttCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTg                                                                                   <  2:215216/140‑1 (MQ=255)

                                                       ggCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGga                                                                                <  2:4686230/140‑1 (MQ=255)

                                                         cATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGgaga                                                                              >  1:1036677/1‑140 (MQ=255)

                                                         cATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGgaga                                                                              <  2:3882352/140‑1 (MQ=255)

                                                         cATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGgaga                                                                              >  1:229967/1‑140 (MQ=255)

                                                         cATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGgaga                                                                              >  2:5506128/1‑140 (MQ=255)

                                                         cATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGgaga                                                                              >  2:1727934/1‑140 (MQ=255)

                                                           tGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGGCCATTCGCGCTGGGCTACCACACCGGGCATTGGGAGATc                                                                            >  2:2818127/1‑140 (MQ=255)

                                                            gACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCg                                                                           >  1:1408957/1‑140 (MQ=255)

                                                            gACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCg                                                                           <  1:4924188/140‑1 (MQ=255)

                                                             aCGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCgg                                                                          <  1:7306029/140‑1 (MQ=255)

                                                              cGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTGCCTCACCGGACATTGGGAGATcctg                                                                         >  1:3552116/1‑137 (MQ=255)

                                                               gCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCa                                                                        <  1:1727934/140‑1 (MQ=255)

                                                                   aaCGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCatgca                                                                    <  2:7131100/140‑1 (MQ=255)

                                                                        cGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCatgcagatgc                                                               >  2:5343319/1‑140 (MQ=255)

                                                                        cGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGATACCACAGCGGGCAATGGGAGATCGGCatgcagatgc                                                               >  1:2243848/1‑140 (MQ=255)

                                                                         gggATGGGGTGGGACGGCAACAAGCTCACCCGCAAAGAGCTGCTGATTGTCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCatgcagatgca                                                              <  2:3648782/140‑1 (MQ=255)

                                                                             tGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCTCACCGGGTATTAGGTGATCGGCATGCAGATGCAggcg                                                          >  1:3648782/1‑140 (MQ=255)

                                                                             tGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAggcg                                                          >  1:6655648/1‑140 (MQ=255)

                                                                             tGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGAATTAGGAGATCGGCATGCAGATGCAggcg                                                          >  1:2523515/1‑140 (MQ=255)

                                                                               ggCTGGTACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGCACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAggcggc                                                        <  1:1807914/140‑1 (MQ=255)

                                                                                gCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAggcggcg                                                       >  2:6231238/1‑140 (MQ=255)

                                                                                 cTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAggcggcgg                                                      <  2:4943189/140‑1 (MQ=255)

                                                                                    ggACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGa                                                   <  2:4858324/140‑1 (MQ=255)

                                                                                     gACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTGCCACACCGGGCAATGGAAGATCGGCATGCAGATGCAGGCGGCGGCGaa                                                  >  2:2505843/1‑140 (MQ=255)

                                                                                      aCGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAg                                                 <  2:4359968/140‑1 (MQ=255)

                                                                                        gCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGga                                               <  2:1483191/140‑1 (MQ=255)

                                                                                          caacaaGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAggc                                                           <  2:6110025/126‑1 (MQ=255)

                                                                                          caacaaGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAggc                                                           >  1:6110025/1‑126 (MQ=255)

                                                                                          caacaaGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGgaga                                             >  2:1356209/1‑140 (MQ=255)

                                                                                          caacaaGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGgaga                                             >  1:4463397/1‑140 (MQ=255)

                                                                                             caaGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATcg                                          <  2:1862484/140‑2 (MQ=255)

                                                                                              aaGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCAc                                         <  1:3826061/140‑1 (MQ=255)

                                                                                                    aCCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGTCGTCGGCGATGGAGATCACCCGCaa                                   >  1:3699890/1‑140 (MQ=255)

                                                                                                    aCCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCAGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCaa                                   >  2:73494/1‑140 (MQ=255)

                                                                                                      cGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATg                                 >  1:5352948/1‑140 (MQ=255)

                                                                                                        gCAAAGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGATACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGc                               >  1:5990703/1‑140 (MQ=255)

                                                                                                          aaaGAGGTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCgg                             >  1:6928646/1‑140 (MQ=255)

                                                                                                                gTGCTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCGGGCCGCGACGAAGGAGATCACACGCAATGGCGGGATccc                       >  2:1941591/1‑140 (MQ=255)

                                                                                                                   cTGATTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGtt                    >  1:515165/1‑140 (MQ=255)

                                                                                                                      aTTATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGAAGATCACCAGCAAAGGCGGGATCCCGTTcgc                 >  2:2895079/1‑140 (MQ=255)

                                                                                                                       ttATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATcc                        <  1:5232959/132‑1 (MQ=255)

                                                                                                                       ttATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATcc                        >  2:5232959/1‑132 (MQ=255)

                                                                                                                       ttATCGGCACTCAGGCCGACATTCGCGCCCGAGACGGCCGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTcgcg                <  1:2035379/140‑1 (MQ=255)

                                                                                                                        tATCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCAAAGGAGAGCACTCGCAATGGCAGGATCCCGTTctgtc               >  1:3137163/1‑136 (MQ=255)

                                                                                                                          tCGGCACTCAGGGCGACCTCCGTGCCGGAGATGGACGCCTAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGcc             <  2:2243848/140‑1 (MQ=255)

                                                                                                                          tCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGcc             <  2:229967/140‑1 (MQ=255)

                                                                                                                          tCGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGcc             >  1:6428348/1‑140 (MQ=255)

                                                                                                                           cGGCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGCTCGCGGCCt            >  2:5676797/1‑140 (MQ=255)

                                                                                                                            ggCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCtt           <  2:4061744/140‑1 (MQ=255)

                                                                                                                             gCACTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTc          >  2:1565493/1‑140 (MQ=255)

                                                                                                                              cACTCAGGGCGACATTCGCGCCGGATACGTACGCCCATTCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCg         <  1:3047656/140‑1 (MQ=255)

                                                                                                                                cTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCGTc       >  1:4358665/1‑140 (MQ=255)

                                                                                                                                cTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCGTc       >  2:1816628/1‑140 (MQ=255)

                                                                                                                                cTCAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCGTc       >  2:3264547/1‑140 (MQ=255)

                                                                                                                                  cAGGGCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCGTCAg     <  1:6148649/140‑1 (MQ=255)

                                                                                                                                    gggCGACATCCGCGCCGTAGACTGACGCCCACTCGAGCTGGGCTACCAGCCCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCGTCAGCg   <  2:3085659/140‑1 (MQ=255)

                                                                                                                                    gggCGACATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCGTCAGCg   <  1:5226477/140‑1 (MQ=255)

                                                                                                                                     ggcgacATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCg         >  2:6263036/1‑133 (MQ=255)

                                                                                                                                     ggcgacATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCg         <  1:6263036/133‑1 (MQ=255)

                                                                                                                                     ggcgacATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCGTCAGCGa  >  2:6490541/1‑140 (MQ=255)

CGCTCTGCCGCTGACCCCGCAGATGCTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGGCATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCGTCAGCGA  >  NC_000913/283278‑283550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`