Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,801,601 T→C V85A (GTC→GCC)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,801,6010TC99.0% 1147.4 / ‑3.6 314V85A (GTC→GCC) nrdEribonucleoside‑diphosphate reductase 2 subunit alpha
Reads supporting (aligned to +/- strand):  ref base T (2/1);  new base C (133/177);  total (135/179)
Fisher's exact test for biased strand distribution p-value = 5.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.26e-01

Only 100 of 321 total aligned reads displayed.

GGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGATTTTGCCGATCGAGT  >  NC_000913/2801464‑2801736
                                                                                                                                         |                                                                                                                                       
   cGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTa                                                                                                                                    <  2:7502760/140‑1 (MQ=255)
   cGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTa                                                                                                                                    <  2:178292/140‑1 (MQ=255)
    gTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTAc                                                                                                                                   <  1:204600/140‑1 (MQ=255)
     ttGACGCCTTTATTGCGTCGCACGTGCGTCCCAACCGTGTGACCTTCACTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACg                                                                                                                                  <  2:2009646/140‑1 (MQ=255)
     ttGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACg                                                                                                                                  <  1:5010386/140‑1 (MQ=255)
     ttGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACg                                                                                                                                  <  2:6535233/140‑1 (MQ=255)
     ttGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACg                                                                                                                                  <  2:358831/140‑1 (MQ=255)
      tGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGc                                                                                                                                 <  2:6803708/140‑1 (MQ=255)
       gACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCt                                                                                                                                >  1:220191/1‑140 (MQ=255)
              ttATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTAcc                                                                                                                         <  2:1888909/140‑1 (MQ=255)
               tATTGCGACGCATGTACGTCCGGACTGTGGGACCTTCCGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTAccc                                                                                                                        <  1:3270432/140‑1 (MQ=255)
                  tGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATTGCTACTCCCGCGACTTGGCCAATACGCTGTTTACCCACg                                                                                                                     >  2:2156879/1‑140 (MQ=255)
                  tGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACg                                                                                                                     <  2:6052283/140‑1 (MQ=255)
                  tGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACg                                                                                                                     >  2:7108169/1‑140 (MQ=255)
                    cGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGca                                                                                                                   <  1:5550176/140‑1 (MQ=255)
                    cGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGca                                                                                                                   <  1:6868406/140‑1 (MQ=255)
                    cGACGCATGTGCGTCCGAACAGGGTGACCTTCAGTGGCCCGCAGCAGCCCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGca                                                                                                                   <  2:3443398/140‑1 (MQ=255)
                      aCGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTGCTCGCGCGACTTTGCCGTTACGCTGTTTACGCACGcaca                                                                                                                 >  2:3637988/1‑140 (MQ=255)
                      aCGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGtt                                                                                                                             >  2:6962866/1‑128 (MQ=255)
                      aCGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGcaca                                                                                                                 >  1:7533357/1‑140 (MQ=255)
                      aCGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGcaca                                                                                                                 >  2:5357778/1‑140 (MQ=255)
                      aCGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGcaca                                                                                                                 >  2:7461849/1‑140 (MQ=255)
                      aCGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCGCGCGACTTTGCCGTTACGCTGTTTACCCACGcaca                                                                                                                 >  2:2099646/1‑140 (MQ=255)
                         cATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGTTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCacacac                                                                                                              >  2:3829336/1‑140 (MQ=255)
                                   cGAACAGTGTGACCTTCAGTAGCCATCAGAAGCGCCTTAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGtttt                                                                                                    <  1:3602608/140‑1 (MQ=255)
                                    gAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTACGCTGTTTACCCACGcacaca                                                                                                               <  1:3939257/128‑1 (MQ=255)
                                    gAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTc                                                                                                   <  1:1613653/140‑1 (MQ=255)
                                    gAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTc                                                                                                   <  2:4268151/140‑1 (MQ=255)
                                          tgtgACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTcc                                                                                             >  1:4199604/1‑140 (MQ=255)
                                          tgtgACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTcc                                                                                             >  2:5895680/1‑140 (MQ=255)
                                          tgtgACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACACTGTTTATCCAGGCACACACCGGCGGTTTTCGTTTcc                                                                                             >  1:2528856/1‑140 (MQ=255)
                                              aCCTTCAGTAGCCAGCAGCAGCGCCTGAACTAGCTGGTCAACGAAGGATACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAgcc                                                                                         >  2:3890641/1‑138 (MQ=255)
                                               ccTTCAGTAGCCAGCGGCAGCGACTTAACAGGCTGGTAAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACa                                                                                        <  1:3019777/140‑1 (MQ=255)
                                               ccTTCAGTAGCCAGCCGCAGCGCCTTAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTTCTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACa                                                                                        <  1:2470346/140‑1 (MQ=255)
                                               ccTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACa                                                                                        <  2:5314896/140‑1 (MQ=255)
                                                cTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGGTTAGCCAGGCACACACGAGCGCTTTTCGTTTCCAGACAt                                                                                       >  2:2238906/1‑140 (MQ=255)
                                                    aGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTAGGCTGTTTAGCCACGTAACCACCAGCGGTTTACGTTTCCACACATTCCt                                                                                   >  2:3609208/1‑140 (MQ=255)
                                                    aGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCGGCCGTTTTCGTTTCCAGACATTCCt                                                                                   >  1:3384632/1‑140 (MQ=255)
                                                    aGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCt                                                                                   <  2:46334/140‑1 (MQ=255)
                                                    aGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCt                                                                                   >  1:6530228/1‑140 (MQ=255)
                                                    aGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCt                                                                                   <  1:4791050/140‑1 (MQ=255)
                                                    aGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGAAATTCCt                                                                                   <  1:5886680/140‑1 (MQ=255)
                                                        gCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGAACACACCAGCGATTTTCGTTTTCAGACATTCCTCggg                                                                               >  1:2592148/1‑140 (MQ=255)
                                                          cagcagcagCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGc                                                                             >  1:3813803/1‑140 (MQ=255)
                                                             cagcagcGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATg                                                                          >  2:5839379/1‑140 (MQ=255)
                                                              agcagcGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATgg                                                                         <  2:7333889/140‑1 (MQ=255)
                                                              agcagcGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATgg                                                                         <  1:1021018/140‑1 (MQ=255)
                                                               gcagcGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTGCTCTCGCGACTTTGCCATTACGCTGTTTCCCCACGCACACCCCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGa                                                                        <  1:1202659/140‑1 (MQ=255)
                                                                   cgcCTTAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGtt                                                                    <  2:4417856/140‑1 (MQ=255)
                                                                   cgcCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGtt                                                                    >  2:7047935/1‑140 (MQ=255)
                                                                      cTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTa                                                                 <  1:7108169/140‑1 (MQ=255)
                                                                      cTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTa                                                                 <  2:415155/140‑1 (MQ=255)
                                                                        gAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACCCCAGCGGTGTTCGTTTGCAGACATTCCTCGGGGCATGGAAGTTTTaca                                                               >  2:2577326/1‑140 (MQ=255)
                                                                        gAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTaca                                                               <  1:7218220/140‑1 (MQ=255)
                                                                        gAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTaca                                                               <  2:4937399/140‑1 (MQ=255)
                                                                        gAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTaca                                                               <  2:247862/140‑1 (MQ=255)
                                                                         aaCTGGCTGGTCAACGAAGGTTCCTATGATGAAAGGGTTCTTAATCGCGACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTacac                                                              <  2:2669230/140‑1 (MQ=255)
                                                                         aaCTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTTCTCTCGCGACTTTGCCATTACGCTGTTTACCCACGAACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTtcac                                                              <  2:5259840/140‑1 (MQ=255)
                                                                         aaCTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTacac                                                              <  2:7533357/140‑1 (MQ=255)
                                                                         aaCTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTacac                                                              <  1:1352916/140‑1 (MQ=255)
                                                                         aaCTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTacac                                                              <  1:4915678/140‑1 (MQ=255)
                                                                          aCTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACAcc                                                             <  1:5770436/140‑1 (MQ=255)
                                                                            tggctggTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAg                                                           <  1:1502911/140‑1 (MQ=255)
                                                                             ggctggTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACAATCCACGGGGCATGCAAGTTTTACACCAGc                                                          >  1:2336915/1‑140 (MQ=255)
                                                                                tggTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCtat                                                       <  2:316376/140‑1 (MQ=255)
                                                                                tggTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCtat                                                       <  1:3881043/140‑1 (MQ=255)
                                                                                 ggTCAACGAAGGTTACTATGATGAAAGCGTTCTTATTCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCtata                                                      <  2:3213608/140‑1 (MQ=255)
                                                                                   tCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACg                                                    <  2:4199604/140‑1 (MQ=255)
                                                                                       cGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGa                                                >  1:7479040/1‑140 (MQ=255)
                                                                                            gTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACa                                           >  1:6421971/1‑140 (MQ=255)
                                                                                                cTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCg                                       <  1:3101267/140‑1 (MQ=255)
                                                                                                 tATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGa                                      >  1:5264258/1‑140 (MQ=255)
                                                                                                  atgatgAAAGCGTTCTTAATCGGTACTCTCGCGACTTTGTCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGAc                                     <  2:2758422/140‑1 (MQ=255)
                                                                                                     atgaAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGt                                  <  1:6214683/140‑1 (MQ=255)
                                                                                                      tgaAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGCAGTATTAGACCAGCTAAACGTAGAAGACATTCGACGGTa                                 >  2:2060456/1‑140 (MQ=255)
                                                                                                      tgaAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACATCAGGTAAACGTTGGAGACATTCGACGGTa                                 >  1:2131090/1‑140 (MQ=255)
                                                                                                      tgaAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGt                                  <  2:5661006/139‑1 (MQ=255)
                                                                                                      tgaAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGt                                  >  2:1593323/1‑139 (MQ=255)
                                                                                                      tgaAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTa                                 >  2:5127614/1‑140 (MQ=255)
                                                                                                      tgaAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTa                                 >  1:5654184/1‑140 (MQ=255)
                                                                                                      tgaAAGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTa                                 >  2:1131093/1‑140 (MQ=255)
                                                                                                          aGCGTTCTTAATCGCTTCTCTCCCGACTTTGGCATTACGCTGTTTACCTACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACg                             <  2:3384632/140‑1 (MQ=255)
                                                                                                          aGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACg                             <  1:7000511/140‑1 (MQ=255)
                                                                                                          aGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTAACACCAGGTATACGTTGAAGAAATTCGACGGTAAACg                             >  1:1928696/1‑140 (MQ=255)
                                                                                                          aGCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTATTAGACCAGCTATACGTTGAAGACATTCGACGGTAAACg                             >  2:3028235/1‑140 (MQ=255)
                                                                                                          aGCGTTCTTAATCGCTACTCTCCCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACg                             <  1:2726167/140‑1 (MQ=255)
                                                                                                           gCGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGt                            >  2:5561940/1‑140 (MQ=255)
                                                                                                            cGTTCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGtt                           <  2:3753342/140‑1 (MQ=255)
                                                                                                               tCTTAATCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATc                        >  1:1412333/1‑140 (MQ=255)
                                                                                                                    aTCGCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGaa                   >  1:732609/1‑140 (MQ=255)
                                                                                                                       gCTACTCTCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGAt                >  1:4441295/1‑140 (MQ=255)
                                                                                                                           ctctCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGATTTTg            >  2:481604/1‑140 (MQ=255)
                                                                                                                           ctctCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGATTTTg            >  2:6287288/1‑140 (MQ=255)
                                                                                                                           ctctCGCGACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGATTTTg            >  1:5374185/1‑140 (MQ=255)
                                                                                                                                gcgACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGATTTTGCCGAt       <  1:3890641/140‑1 (MQ=255)
                                                                                                                                gcgACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGATTTTGCCGAt       <  2:1396064/140‑1 (MQ=255)
                                                                                                                                gcgACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGATTTTGCCGAt       <  1:6043514/140‑1 (MQ=255)
                                                                                                                                gcgACTATGCCATTACGCTGTTTATCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGGAGTCATTCGACGGTAAACGTTATCTGGAAGATTTTGCCGAt       >  2:3954002/1‑140 (MQ=255)
                                                                                                                                  gACTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGATTTTGCCGATCg     <  2:1412333/140‑1 (MQ=255)
                                                                                                                                   aCTTTGCCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGATTTTGCCGATCGa    >  1:7436689/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                       
GGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGATTTTGCCGATCGAGT  >  NC_000913/2801464‑2801736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: