| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,059,012 | A→T | I105N (ATC→AAC) | rpiA ← | ribose‑5‑phosphate isomerase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,059,012 | 0 | A | T | 99.7% | 1312.9 / NA | 384 | I105N (ATC→AAC) | rpiA | ribose‑5‑phosphate isomerase A |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (234/149); minor base C (0/1); total (234/150) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 392 total aligned reads displayed.
CAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAG > NC_000913/3058876‑3059148 | cAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGtttt < 1:6273605/140‑1 (MQ=255) tCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCa < 2:6604043/140‑1 (MQ=255) tCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCa < 1:1834804/140‑1 (MQ=255) gCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGAAAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTc > 2:7226576/1‑140 (MQ=255) cTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCa > 1:85275/1‑140 (MQ=255) cTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCa > 2:4685406/1‑140 (MQ=255) tGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAg > 1:6222152/1‑140 (MQ=255) tGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAg > 2:5089369/1‑140 (MQ=255) aCGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAgcg > 2:3772625/1‑140 (MQ=255) cACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCGACCGAAGTAATGTTTTTTTCACGGGTCAgcgccgcgc > 1:2873503/1‑140 (MQ=255) cACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAgcgccgcgc < 1:6773531/140‑1 (MQ=255) cTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGcgccgcgccg < 1:1058387/140‑1 (MQ=255) cTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGcgccgcgccg < 2:7313425/140‑1 (MQ=255) cTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGcgccgcgccg < 1:4685406/140‑1 (MQ=255) cACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGcgccgccg < 2:1622013/140‑1 (MQ=255) tACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCt < 2:143873/140‑1 (MQ=255) tACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCGGCAACCGAAGCAATGTTTTTTTCACAGGTCCGCGCCGCGCCGCCGCCt > 2:2523846/1‑140 (MQ=255) cGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCttt > 1:1438302/1‑140 (MQ=255) gCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGAt > 1:7148577/1‑140 (MQ=255) cATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCa > 2:580777/1‑140 (MQ=255) cGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCAttt > 2:7462742/1‑140 (MQ=255) cGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTATTTGACGGGTCAGCGCGGCGCTGCCGCCTTTGATCAttt > 2:1953775/1‑140 (MQ=255) ggATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGc > 1:5854925/1‑140 (MQ=255) cTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCg > 1:7187238/1‑140 (MQ=255) cTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCg > 1:3946788/1‑140 (MQ=255) aCTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGtt > 1:3812955/1‑140 (MQ=255) aCTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGtt > 2:6079265/1‑140 (MQ=255) gCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGAtt > 1:1668034/1‑140 (MQ=255) aGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTc > 1:4497272/1‑140 (MQ=255) aGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGACGCCGCCCTTGATCCTTTGCAAGTGGCCGTTGATTTc > 1:3411465/1‑140 (MQ=255) cGGGAATTTACCCAGCATATCACCCCGCTTGGAAGCGACTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCAt < 1:2327931/140‑1 (MQ=255) cGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCAt > 1:6414095/1‑140 (MQ=255) aaTTTACCCAGAATATCAACCTTCTAGGACGCGTCTGAAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTgc < 1:1953775/140‑1 (MQ=255) ttACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGcc < 1:6079265/140‑1 (MQ=255) ttACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGcc < 1:6648512/140‑1 (MQ=255) aCCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCAt < 2:6994412/140‑1 (MQ=255) cccAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATc > 2:5877287/1‑140 (MQ=255) ccAGAATATCAACCTTCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCa < 1:3072765/140‑1 (MQ=255) ccAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCa < 2:4450771/140‑1 (MQ=255) aaTATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGt > 2:6351511/1‑140 (MQ=255) atatCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTa < 2:6444643/140‑1 (MQ=255) atatCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTa < 2:7148577/140‑1 (MQ=255) atatCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTa < 2:6705358/140‑1 (MQ=255) atatCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCAGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTa < 2:7540690/140‑1 (MQ=255) atCAACCTGCTTGGAAGCGTCTGCAATACAGATAACTTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGa < 2:2606668/140‑1 (MQ=255) cAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGAATGTGGCAGTTGATTTCATCTGCGCCATCAACGTAGATg > 2:2860835/1‑140 (MQ=255) aaCCTGCTTGGAAGCGAATGCATTACAGATCTACTTTTCCGCAACCGACGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGc < 2:3622432/140‑1 (MQ=255) aCCTGCTTGGAAGCGTCTGCAAAACAGATAACTTTTTCTGCAACCGAATCAATGTTTTTTTCGCGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGcc < 2:2968526/140‑1 (MQ=255) ccTGCTTGGAAGCGTCTGCAATCCAGATAAATTTTTCTGTAACCGAAGGAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCa < 2:2328782/140‑1 (MQ=255) ccTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCa < 1:4826703/140‑1 (MQ=255) ccTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCa < 2:6835604/140‑1 (MQ=255) tGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGAt > 1:7489243/1‑134 (MQ=255) tGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAg > 2:1677468/1‑140 (MQ=255) tGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAg > 2:4587152/1‑140 (MQ=255) tGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAg > 2:1260876/1‑140 (MQ=255) tGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAg > 2:4902955/1‑140 (MQ=255) tGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAg > 2:4252622/1‑140 (MQ=255) tGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAg > 2:522498/1‑140 (MQ=255) tGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTAGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAg > 2:2181827/1‑140 (MQ=255) tGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCAATTGCATGTAGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAg > 2:2011318/1‑140 (MQ=255) cTTGGAAGCGTCTGCAATACAGATAAATTTTTTTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTa < 1:7557817/129‑1 (MQ=255) cTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACTGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGCTGCCAAGGc > 2:4357726/1‑140 (MQ=255) cTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGGCGTGGATCTCATCTGCGCCATGAACGTAGATGCCAAGGc > 2:3333002/1‑140 (MQ=255) cTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCTTTGATTTCATCTGCTCCATCACCGTAGATGCCAAGGc > 1:2950388/1‑140 (MQ=255) cTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGc > 1:376023/1‑140 (MQ=255) cTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGc > 1:1187524/1‑140 (MQ=255) cTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGc > 1:5589916/1‑140 (MQ=255) cTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGc > 1:5362728/1‑140 (MQ=255) cTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTAATCTGCCCCATCAACGTAGATGCCAAGGc > 1:2736126/1‑140 (MQ=255) cTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCACCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGc > 2:766481/1‑140 (MQ=255) ggAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGt < 1:4378550/140‑1 (MQ=255) ggAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGt < 2:5589916/140‑1 (MQ=255) gCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGAc > 1:7273004/1‑140 (MQ=255) tCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCTCGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTc > 2:4850332/1‑140 (MQ=255) tCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCa > 2:3861609/1‑126 (MQ=255) tCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTc > 1:1359562/1‑140 (MQ=255) tCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTc > 1:4162715/1‑140 (MQ=255) tCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTc > 2:1519829/1‑140 (MQ=255) tCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTc > 1:6843896/1‑140 (MQ=255) tCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTc > 2:5687293/1‑140 (MQ=255) tCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCAGCGGCATCAACGTAGATACCAAGGCTGTCGACTTc > 2:2419329/1‑140 (MQ=255) gCAATACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt < 2:4048583/140‑1 (MQ=255) aaTACAGATAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTga < 1:6486300/140‑1 (MQ=255) aaTACAGATAAATTTATCTGCAGCCTAAGTAATGTTTCTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTga < 1:3528404/140‑1 (MQ=255) aTAAATTTTTCTGCATCCGAAGCAATGTTTTTTTCACCGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCaaa < 1:2116013/140‑1 (MQ=255) aTAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATGTGCGCCATGAACATAGCTGCCAAGGCTGTCGACTTCGTTGAGATCaaa > 2:2026243/1‑140 (MQ=255) tAAATTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCaaaa > 1:6986509/1‑140 (MQ=255) aaaTTTTTCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCaaaaa > 1:6715471/1‑140 (MQ=255) ttttCTGCAACCGAATCAATGTTTTATTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTg < 1:3169449/140‑1 (MQ=255) tttCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGa < 2:1359562/140‑1 (MQ=255) tttCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGa < 2:6244406/140‑1 (MQ=255) tttCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGa > 2:1053417/1‑140 (MQ=255) tttCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGa > 2:7085257/1‑140 (MQ=255) ttCTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGaa > 1:5122107/1‑140 (MQ=255) cTGCAACCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGATATCAAAAACGTGAATg > 2:1790952/1‑140 (MQ=255) aCCGAAGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAg < 1:4555444/140‑1 (MQ=255) aaGCAATGTTTTTTTCACGGGTCAGCGCCGCGCCGGCGCTTTTGATCAGTTGCATGTGGCCGTTGATTTAATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCtt < 2:3089917/140‑1 (MQ=255) gCAATGTTTTTTTCACGGGTCATCGCCGCTCCGCCGCGTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCtttt < 1:2448272/140‑1 (MQ=255) aaTGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttttca < 1:522498/140‑1 (MQ=255) aTGTTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttttcag > 1:5942278/1‑140 (MQ=255) | CAGTTTCACCAGCTGACGCGCCACTGCACTACGTGCCATCGGGATAACTTCTACTGGCAGCGGGAATTTACCCAGAATATCAACCTGCTTGGAAGCGTCTGCAATACAGATAAATTTTTCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAG > NC_000913/3058876‑3059148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |