Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,093,479 T→C P181P (CCT→CCC yqgE → DUF179 domain‑containing protein YqgE

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,093,4790TC99.7% 1313.5 / NA 355P181P (CCT→CCCyqgEDUF179 domain‑containing protein YqgE
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (182/172);  minor base A (1/0);  total (183/172)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 360 total aligned reads displayed.

GGTCAACTGGAACAAGAAATTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCTGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTAC  >  NC_000913/3093342‑3093615
                                                                                                                                         |                                                                                                                                        
   cAACTGGAACAAGAAATTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGgtgt                                                                                                                                     >  2:1715092/1‑140 (MQ=255)
         gAACAAGAAATTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAgg                                                                                                                               >  2:818532/1‑140 (MQ=255)
          aagaagaagTTCTCGACAACGCGTGGCTAACGGGCCCGGCAGATCTCAATATTCTGTTCAAAAGGCCGATTGCCGCCCGCTGGCGCGAGGCGGCAAATCTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGa                                                                                                                              <  2:7496940/137‑1 (MQ=255)
          aaCAAGAAATTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGa                                                                                                                              <  2:1596585/140‑1 (MQ=255)
           aCAAGAAATTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGac                                                                                                                             >  1:248826/1‑140 (MQ=255)
           aCAAGAAATTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCAATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGac                                                                                                                             >  1:1861347/1‑140 (MQ=255)
            cAAGAAATTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGaca                                                                                                                            <  2:6888722/140‑1 (MQ=255)
            cAAGAAATTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGaca                                                                                                                            <  2:134584/140‑1 (MQ=255)
             aaGAAATTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGacac                                                                                                                           <  2:842849/140‑1 (MQ=255)
               gAAATTCTCGATAACGCATGGCCAACGGCCCTGGCAGATCTGAATATTTTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGc                                                                                                                         <  2:2270298/140‑1 (MQ=255)
                aaaTTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGGGTGGATAGTCTCACCAGGCCCGGTGTGGCAGGACACGcc                                                                                                                        >  2:1979265/1‑140 (MQ=255)
                  aTTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCtg                                                                                                                      <  2:5063997/140‑1 (MQ=255)
                   ttCTCGATAACGCGTGGTTAACCGCCCCGGCTGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCtga                                                                                                                     <  2:2553593/140‑1 (MQ=255)
                       cGATAACGGGTGGCTATAGGCCGCGGCAGATATTATTATGCTGTTCAATACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAg                                                                                                                 <  2:3533835/140‑1 (MQ=255)
                       cGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCtg                                                                                                                      <  2:5321987/135‑1 (MQ=255)
                           aaCGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGCTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGa                                                                                                             >  2:4548992/1‑140 (MQ=255)
                             cgcgTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAAc                                                                                                           >  2:5285385/1‑140 (MQ=255)
                             cgcgTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAAc                                                                                                           >  1:5016644/1‑140 (MQ=255)
                             cgcgTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGGGTGAATATTCTCACCAGGCCCGGTGTGGCCGGACGCGCCTGATGAGGGGAAc                                                                                                           >  2:2671648/1‑140 (MQ=255)
                                  ggCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTAc                                                                                                      <  1:1054948/140‑1 (MQ=255)
                                  ggCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTAc                                                                                                      >  2:6251948/1‑140 (MQ=255)
                                       aCGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGcc                                                                                                 >  1:5625302/1‑140 (MQ=255)
                                        cGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGATACGACTGATGAGTGGAACCTTACTCGCCt                                                                                                >  1:2715181/1‑140 (MQ=255)
                                              cGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACt                                                                                          >  1:5068413/1‑140 (MQ=255)
                                                 gacagcTGAATATTCAGTTCAACACTCCGTTTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCg                                                                                       <  1:3472230/135‑1 (MQ=255)
                                                  aGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCgg                                                                                      <  1:3975465/140‑1 (MQ=255)
                                                  aGATCTGAATATTCTGTCCAAACCGCCGATTTCCGGCCGGTGGCGCGAAGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCgg                                                                                      <  2:3056837/140‑1 (MQ=255)
                                                    aTCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCa                                                                                    >  2:1776356/1‑140 (MQ=255)
                                                      cTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTc                                                                                              <  2:6379562/128‑1 (MQ=255)
                                                      cTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTc                                                                                              >  1:6379562/1‑128 (MQ=255)
                                                         aaTATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCaaa                                                                               <  1:4115325/140‑1 (MQ=255)
                                                         aaTATTCTGTTCAAAACCCCGACTGCCGACCTCTGTCGCTAGGCGGCACAACTGATAGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCaaa                                                                               <  2:2077582/140‑1 (MQ=255)
                                                           tatTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACGTTACTCGCCTTCGACTTCGGCACCAAAAg                                                                             >  1:1937498/1‑140 (MQ=255)
                                                             ttCTGTTCAAAACGCCGATTGCTGACCGCTGTCGCCAGGAGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCa                                                                           <  2:1937498/140‑1 (MQ=255)
                                                              tCTGTTCAAAACGCCAATTGCCAACCGCTCGCGCGAGCCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCAt                                                                          <  1:3628943/140‑1 (MQ=255)
                                                                tGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCCAAAGCATTg                                                                        >  1:6706015/1‑140 (MQ=255)
                                                                tGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTg                                                                        >  2:4793845/1‑140 (MQ=255)
                                                                tGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTg                                                                        >  1:93535/1‑140 (MQ=255)
                                                                tGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTg                                                                        >  2:4250971/1‑140 (MQ=255)
                                                                tGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTg                                                                        >  1:6099175/1‑140 (MQ=255)
                                                                tGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTg                                                                        >  1:1612077/1‑140 (MQ=255)
                                                                tGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTg                                                                        >  1:4495598/1‑140 (MQ=255)
                                                                tGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTCGAACCATACTCGCCTTAGACTCAGGCACCAAAAGCATTg                                                                        >  2:3403012/1‑140 (MQ=255)
                                                                tGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGGGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTg                                                                        >  2:5401864/1‑140 (MQ=255)
                                                                 gTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTgg                                                                       >  1:5144727/1‑140 (MQ=255)
                                                                 gTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGCAACATTAATCGCCTTCGACTTTCGCACCAACAGcctgtc                                                                       >  2:3472230/1‑135 (MQ=255)
                                                                 gTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCGGATGAGTGAAACATAAAACGCCTTCTACTTAAGCACCAATAGCATTgg                                                                       >  2:3628943/1‑140 (MQ=255)
                                                                   tCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGGTGAGTGGAGCCTGACTTGCCTTCGAATTCGGCACCAAAAGCATTGGCg                                                                     >  2:2796906/1‑140 (MQ=255)
                                                                   tCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGGTGAGTGGAACCTGAGTCGCCTTCGACTTCGGCACCAAAAGCATTGGCg                                                                     >  2:3225431/1‑140 (MQ=255)
                                                                   tCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACTTTACTCGCCTTGGAATTCGGCGCCAAAAGCATTGGCg                                                                     >  1:2829322/1‑140 (MQ=255)
                                                                   tCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCg                                                                     >  2:4100992/1‑140 (MQ=255)
                                                                   tCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCg                                                                     >  2:4854242/1‑140 (MQ=255)
                                                                   tCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCg                                                                     >  1:530483/1‑140 (MQ=255)
                                                                   tCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCg                                                                     >  1:1246468/1‑140 (MQ=255)
                                                                         cGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCgg                                                               <  1:1683332/140‑1 (MQ=255)
                                                                            cGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCg                                                            >  2:1536341/1‑140 (MQ=255)
                                                                              aTTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGc                                                          <  1:751213/140‑1 (MQ=255)
                                                                              aTTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGc                                                          <  2:6784782/140‑1 (MQ=255)
                                                                               ttGCCGACCGCTGGCGCGAGGCTGCAAAACTTATTTGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGcc                                                         <  2:2356376/140‑1 (MQ=255)
                                                                                    gACCGCTGGCGCGAGACGGCAAAACTGATGGGTGTGGTTATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGc                                                    <  1:3256568/140‑1 (MQ=255)
                                                                                     aCCGCTGGCGCGAGGCGGCAAAGCTGATTGGTGTGAATAATCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCa                                                   <  2:2479490/140‑1 (MQ=255)
                                                                                     aCCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCa                                                   >  2:7092764/1‑140 (MQ=255)
                                                                                            gcgcGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCgg                                            <  2:463142/140‑1 (MQ=255)
                                                                                            gcgcGAGGCGACAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCgg                                            <  1:6247619/140‑1 (MQ=255)
                                                                                             cgcgAGGCGGCAAAAATGATTGTTGCGGACATTCTCAACATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGc                                           <  1:2065058/140‑1 (MQ=255)
                                                                                                   gcggcAAAACTGATTGGTGTGGCTATTCTCACCATGCTCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCt                                     <  1:2898342/140‑1 (MQ=255)
                                                                                                    cggcAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGGGGTCGGCCAACGCTTTACCGGCACCGCTc                                    >  1:2989309/1‑140 (MQ=255)
                                                                                                     ggcAAAACTGATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCg                                   <  1:6616225/140‑1 (MQ=255)
                                                                                                              gATTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGcc                          <  1:7305743/140‑1 (MQ=255)
                                                                                                              gATTGGTGTGGATATTCTCACCATGCCCGGTGCGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGcc                          >  1:4919302/1‑140 (MQ=255)
                                                                                                               aTTGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCt                         <  2:1127090/140‑1 (MQ=255)
                                                                                                                 tGGTGTGGATATTCTCACCATGGCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGc                       <  1:3403012/140‑1 (MQ=255)
                                                                                                                 tGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGc                       <  1:4767471/140‑1 (MQ=255)
                                                                                                                 tGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGc                       <  1:5405498/140‑1 (MQ=255)
                                                                                                                 tGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGc                       <  1:651621/140‑1 (MQ=255)
                                                                                                                 tGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGc                       <  1:6870631/140‑1 (MQ=255)
                                                                                                                 tGGTGTGGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGc                       <  2:7277516/140‑1 (MQ=255)
                                                                                                                    tgtgGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAAt                    >  2:6917532/1‑140 (MQ=255)
                                                                                                                      tgGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTa                  <  1:6917532/140‑1 (MQ=255)
                                                                                                                      tgGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTa                  <  1:7153777/140‑1 (MQ=255)
                                                                                                                      tgGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTa                  <  2:6155618/140‑1 (MQ=255)
                                                                                                                      tgGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTa                  <  2:6694945/140‑1 (MQ=255)
                                                                                                                      tgGATATTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTAACGGAACGGCTCGCACTTTGCCTGCAATTa                  >  1:2142373/1‑140 (MQ=255)
                                                                                                                        gATATTCTCACCATGACCGGTGAGGTAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTaaa                <  1:3576955/140‑1 (MQ=255)
                                                                                                                           atTCTCACCATGCCCTGTGTGGAAGCACAAGCCTGATTAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGca             <  1:2242539/140‑1 (MQ=255)
                                                                                                                           atTCTCACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGca             <  1:4854242/140‑1 (MQ=255)
                                                                                                                           atTCTCACCATGCCCGGCGTGGTAGGACACGCCTGGTGACTGGAACCTCACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGca             <  2:2989309/140‑1 (MQ=255)
                                                                                                                             tctcACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGcaca           >  2:284276/1‑140 (MQ=255)
                                                                                                                              ctcACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAg          >  1:5930213/1‑140 (MQ=255)
                                                                                                                              ctcACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATAACCTGCAAAGCTCGCCCTTTGCATGCAATTAAAGCACAg          >  2:3712852/1‑140 (MQ=255)
                                                                                                                                cACCATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGa        >  1:831059/1‑140 (MQ=255)
                                                                                                                                  ccATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACg      >  2:5756768/1‑140 (MQ=255)
                                                                                                                                   cATGCCCGGTGTGGCAGGACACGCCTGGTGAGTGGAACCTTACTCGGCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCTGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACgg     >  2:51225/1‑140 (MQ=255)
                                                                                                                                   cATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCTAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACgg     >  2:5561933/1‑140 (MQ=255)
                                                                                                                                   cATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACgg     >  1:3794749/1‑140 (MQ=255)
                                                                                                                                   cATGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGAGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAg               <  2:6553536/130‑1 (MQ=255)
                                                                                                                                    aTGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGt    >  2:3956394/1‑140 (MQ=255)
                                                                                                                                    aTGCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGt    >  1:4587645/1‑140 (MQ=255)
                                                                                                                                      gCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTAc  >  2:5895452/1‑140 (MQ=255)
                                                                                                                                      gCCCGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTAc  >  2:182337/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                        
GGTCAACTGGAACAAGAAATTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCTGGTGTGGCAGGACACGCCTGATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTAC  >  NC_000913/3093342‑3093615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: