| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,146,246 | T→C | T6A (ACC→GCC) | hybO ← | hydrogenase 2 small subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,146,246 | 0 | T | C | 99.3% | 2109.8 / ‑3.5 | 588 | T6A (ACC→GCC) | hybO | hydrogenase 2 small subunit |
| Reads supporting (aligned to +/- strand): ref base T (1/3); new base C (239/344); total (241/347) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 594 total aligned reads displayed.
ACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGTGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGATATCATGATACTGCGGCG > NC_000913/3146110‑3146383 | tGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTAt > 2:4188361/1‑140 (MQ=255) gCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTAtct > 1:533249/1‑140 (MQ=255) cGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTAtctc < 2:5891246/140‑1 (MQ=255) ggACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCAAGAATTCACGACGGTTATTGCCGTGAGAATGGATGAGGGCGTTAtctca > 2:2962368/1‑139 (MQ=255) gACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCa < 2:3377194/140‑1 (MQ=255) gACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCa < 2:7126918/140‑1 (MQ=255) gACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCa > 1:4264467/1‑140 (MQ=255) gACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCa < 2:5826847/140‑1 (MQ=255) gACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATAAAATCACGCCGGATAATGCCGTGAGGATGGTTGAGGGCGTTATCTCCa > 2:2372416/1‑140 (MQ=255) agcGCTGCGGGTTAGTATCCGACTCGGCCATCTCTACAGCGGCTTTGCGACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCa < 2:1990291/138‑1 (MQ=255) aCGCTGCGGGTTAGTAACCGATTCGGCCAGCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAg < 1:3338462/140‑1 (MQ=255) cGCTGCGGGTTAGTACCCGATTCGGCCATCTCTGCAGTGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGt < 1:3405716/140‑1 (MQ=255) cGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGTCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGt < 2:2058369/140‑1 (MQ=255) gCTGCGGGTTAGTAACCGATTCGGCGATCACTGCAGCCGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTc < 1:3252544/140‑1 (MQ=255) cTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCa < 2:5172594/140‑1 (MQ=255) cTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCa < 2:1697606/140‑1 (MQ=255) gCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCAtt < 1:6378285/140‑1 (MQ=255) gCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACATAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCAtt < 2:1247953/140‑1 (MQ=255) ggTTAGTACCCGATTCTCCCATTTCTTCAGGAGTTGTGCGACTTAACCGCATGGTGGCGGCTAATGCTGTACAAAGCTTCATGAAATCACGACGGTTAATGGCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTtat < 2:3593930/140‑1 (MQ=255) aGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGGGAATGGAGGAGGGCGTTATCTGCAGTCATTTATAgct > 1:1990291/1‑138 (MQ=255) gATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGt > 1:823405/1‑140 (MQ=255) ttCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGCTGAGGGCGTTATCTCCAGTCATGTATAGTTCTTCCGTTg > 2:3535336/1‑140 (MQ=255) ttCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTg > 2:5405383/1‑140 (MQ=255) ttCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTg > 1:547741/1‑140 (MQ=255) tCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTTCAGTCATTTATAGTTATTCCGTTGc > 1:2499672/1‑140 (MQ=255) cGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGTGTTATCTCCAGTCATTTATAGTTATTCCGTTGCg < 1:1362845/140‑1 (MQ=255) cGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCg < 2:1511795/140‑1 (MQ=255) cGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTAGCg < 2:7174912/140‑1 (MQ=255) cGGCCATCTCTGCAGCGACTTTACTACTTAATCCCTTGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCg < 2:3189810/140‑1 (MQ=255) aTCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGAc < 2:1106237/140‑1 (MQ=255) aTCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGAc < 2:7488419/140‑1 (MQ=255) aTCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGAc < 1:1679655/140‑1 (MQ=255) aTCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGAc < 1:747784/140‑1 (MQ=255) aTCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGAc < 2:1866376/140‑1 (MQ=255) aTCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGAc < 2:4046429/140‑1 (MQ=255) tGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGc < 1:7422050/140‑1 (MQ=255) tGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGc < 2:4818746/140‑1 (MQ=255) gCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGAc > 2:3974846/1‑128 (MQ=255) gCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCat < 1:2977684/135‑1 (MQ=255) gCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATAtt > 2:3820941/1‑140 (MQ=255) cTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATAttt > 1:264033/1‑140 (MQ=255) cTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATAttt > 1:5282290/1‑140 (MQ=255) ttGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTg > 2:633700/1‑140 (MQ=255) aCTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCa < 2:4554911/140‑1 (MQ=255) aCCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGc < 2:5586638/140‑1 (MQ=255) aCCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATGTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGc < 1:682238/140‑1 (MQ=255) cccATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCaa < 2:6941842/140‑1 (MQ=255) ccATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCaaa < 2:6995025/140‑1 (MQ=255) aTGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAAt > 2:4979155/1‑140 (MQ=255) tggtggCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATc > 2:821111/1‑140 (MQ=255) tggtggCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATc > 1:621807/1‑140 (MQ=255) tggtggCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATc > 2:7430911/1‑140 (MQ=255) ggtggCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCa > 1:3163645/1‑140 (MQ=255) tggCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCaat > 2:140284/1‑140 (MQ=255) gcggcTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCaataa > 2:3729732/1‑140 (MQ=255) gcTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGc < 1:6102653/140‑1 (MQ=255) cacaAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATGTTTGGCCGCAATCGCATAATCAATAATGCGATCGATgcg > 2:2795523/1‑140 (MQ=255) cacaAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATgcg > 1:7170348/1‑140 (MQ=255) cacaAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATgcg > 1:6513147/1‑140 (MQ=255) caAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGcc < 2:621807/140‑1 (MQ=255) aaGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCAt < 1:222759/140‑1 (MQ=255) aGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATgcg < 1:5986115/135‑1 (MQ=255) ttCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTAc < 2:647422/140‑1 (MQ=255) cATGAAATCACGACGTTTAATGTCGCGAGTATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACca < 1:3638262/140‑1 (MQ=255) cATGAAATCACGACGGTTAATGGCGTGAGAAGGGAAGAGCGCGTTATCCCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACca < 2:2685000/140‑1 (MQ=255) cATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGcgat > 2:304563/1‑123 (MQ=255) cATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACca < 1:4865088/140‑1 (MQ=255) cATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACca < 1:1173390/140‑1 (MQ=255) cATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACca < 2:6581041/140‑1 (MQ=255) aTGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACcac < 1:1012913/140‑1 (MQ=255) tGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACcaca > 1:4545632/1‑140 (MQ=255) gAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACcacac < 2:7331905/140‑1 (MQ=255) gAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACcacac < 1:7333758/140‑1 (MQ=255) gAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACcacac < 1:1460858/140‑1 (MQ=255) gAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACcacac < 1:3788110/140‑1 (MQ=255) gAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACcacac < 1:469913/140‑1 (MQ=255) gAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACcacac < 1:6638320/140‑1 (MQ=255) gAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACcacac < 1:6956561/140‑1 (MQ=255) tCACGACGGTTAATGCCGTGAGAATGGATGAGGGTGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACAttt > 2:6027945/1‑140 (MQ=255) tCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACca > 1:4006350/1‑133 (MQ=255) tCACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCAAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACAttt > 1:5898344/1‑140 (MQ=255) cACGACGGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGTTGCGCCATTTACCACACATtta > 2:3263937/1‑140 (MQ=255) cgacgGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACca < 2:1071840/130‑1 (MQ=255) cgacgGTTAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATttatt < 2:5282290/140‑1 (MQ=255) ttAATGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGtt > 1:1786323/1‑140 (MQ=255) aaTGCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTAt < 2:6752728/140‑1 (MQ=255) gCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGa < 2:4405773/140‑1 (MQ=255) gCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGa < 1:1907907/140‑1 (MQ=255) gCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGa < 1:4158628/140‑1 (MQ=255) gCCGTGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGa < 1:5066978/140‑1 (MQ=255) gCCGTGAGAATGGATGACGGCGTTATCTCCATTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGa < 2:2323670/140‑1 (MQ=255) gCCGTGAGAATGGATCAGGGCGCTAGCTCCAGTCATTGATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGa < 1:3539865/140‑1 (MQ=255) gCCGTGAGAATGGATAAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGa < 1:2880896/140‑1 (MQ=255) cGTGAGAATGGATGATGGCGTTCTCCCCAATCATTTAAAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGata < 1:2353146/140‑1 (MQ=255) tGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAGTGCGATCGGTGCGCCAGTTACCACAGATTTTTTATGGTTATCGactgt > 2:2173879/1‑136 (MQ=255) tGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGATATc > 1:579112/1‑140 (MQ=255) tGAGAATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATACGCCATTAACCTCAAATTTATAATGGTTATCGATATc > 1:2058801/1‑140 (MQ=255) gagaATGGATGAGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGATATCa > 1:7067297/1‑140 (MQ=255) aGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGATATCa < 1:1072621/129‑1 (MQ=255) aGGGCGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGATATCATGATACTgcgg > 1:4434799/1‑140 (MQ=255) | ACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACTTAACCCCATGGTGGCGGCTAATGCTGCACAAAGCTTCATGAAATCACGACGGTTAATGCCGTGAGAATGGATGAGGGTGTTATCTCCAGTCATTTATAGTTATTCCGTTGCGAAGACCTGGCATATATTTTGCCTCAATCGCAAAATCAATAATGCGATCGATGCGCCATTTACCACACATTTATTATGGTTATCGATATCATGATACTGCGGCG > NC_000913/3146110‑3146383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |