| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,231,336 | A→T | intergenic (+97/‑329) | ygjK → / → fadH | glycoside hydrolase/2,4‑dienoyl‑CoA reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,231,336 | 0 | A | T | 99.6% | 793.9 / NA | 250 | intergenic (+97/‑329) | ygjK/fadH | glycoside hydrolase/2,4‑dienoyl‑CoA reductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (149/100); minor base C (1/0); total (150/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 261 total aligned reads displayed.
TATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCC > NC_000913/3231204‑3231397 | tgttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCgcgc > 2:1741588/1‑140 (MQ=255) gttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTACATCCGGCATCTGCACCGCGcc > 2:1618885/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGTCCGGATAAAACGCGGCAAGCG‑TGCACCCGGAATCTGCACCGCGCCACt > 2:2455714/1‑140 (MQ=25) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAGACGGGGCCAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 2:2342909/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 2:5383910/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 1:4758048/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 2:4855191/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 2:5033917/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 2:5714161/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 1:5505511/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 1:5750383/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 2:974140/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 1:6424118/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 2:707529/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 1:7327107/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 1:1910531/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCAc > 2:1137666/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAACCGTGGCCTCCGGCCTCTGCACCGCGCCAc > 1:2633116/1‑140 (MQ=25) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAACGTTGCTTCCGGCATCTGCACCGCGCCAc > 1:3063058/1‑140 (MQ=255) tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGCCCGGATAAAATGCGGCAATCGTAGCTTCCGGCATCTTCACCGCGCCAc > 1:3158236/1‑140 (MQ=25) tataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCTGGATAAAAAGCGGCAAGCGTTGCATGCGGCGTCTGCACCGCGCCACTg > 2:2285159/1‑140 (MQ=25) tataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCGGGATAAAAAGCGACAAGCGTTGCATCCGGCTTCTGCACCGCGCCACTg > 2:2674390/1‑140 (MQ=25) tataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTg > 2:435190/1‑140 (MQ=255) tataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCAGGATAAAACGCGGCAAGCGTTGCATCCGGCCTCTGCACCGCGCCACTg > 2:3181506/1‑140 (MQ=255) ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCTGCAAGCGCTGCTTCTGGCATCGGCACCGCGCCACTgg > 1:2314287/1‑140 (MQ=25) ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTgg > 1:3882649/1‑140 (MQ=255) ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTgg < 2:1847023/140‑1 (MQ=255) ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTgg > 2:1914093/1‑140 (MQ=255) ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTgg > 1:6715002/1‑140 (MQ=255) ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTgg > 1:464467/1‑140 (MQ=255) ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTgg > 1:4516456/1‑140 (MQ=255) ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTgg > 2:6213630/1‑140 (MQ=255) ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTgg > 1:1763347/1‑140 (MQ=255) ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCAGCAAGCGCTGCATCGGGCATCAGCACCGCGCCACTgg > 1:2086526/1‑140 (MQ=25) ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCAGATAAAACGCGGTAAGAATTGCATCAGGCACCTGCACCGAGCCACTgg > 2:3716085/1‑140 (MQ=25) taACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGc > 2:5991009/1‑140 (MQ=255) cGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGa > 2:6450565/1‑140 (MQ=255) cGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGa > 1:6982642/1‑140 (MQ=255) cGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGa > 2:7322884/1‑140 (MQ=255) cGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGa > 2:875790/1‑140 (MQ=255) cGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGa > 1:6783047/1‑140 (MQ=255) cGATTTTTTCCGTAAGCAATAACTTGCAACTGCTGTCGGCTGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGa < 2:3351463/140‑1 (MQ=255) gATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGAt > 1:12368/1‑140 (MQ=255) aTTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATg > 1:5646171/1‑140 (MQ=255) tttttCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATgcg < 1:1078230/140‑1 (MQ=255) tttttCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATgcg < 2:4465988/140‑1 (MQ=255) tttttCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATgcg < 1:6754565/140‑1 (MQ=255) tttttCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATgcg < 1:4459083/140‑1 (MQ=255) ccGTAAGCTATAATTTCGAACTTCTGGCGGGTGTGGCGTAAACGCCTTTTCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTg < 2:3621574/140‑1 (MQ=18) ccGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTg < 1:7574884/140‑1 (MQ=255) ccGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTg < 2:762087/140‑1 (MQ=255) ccGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTAATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTg < 1:4813746/140‑1 (MQ=255) ccGTAAGCAATAATTTGCAACTACTGGCGGATGCGCCGTCAACGCCTTTTCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTg < 2:2633116/140‑1 (MQ=21) cGTAAGCAATAATTTGCAACTGCTGTCGGATGCGGCGCAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTgg < 1:2242203/140‑2 (MQ=255) tAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGAc > 2:7287734/1‑140 (MQ=255) aaGCAATAATTTGCAACTGCTGTCGGATGCGTCGTTAACTCCTTATCCCCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACg < 2:2179076/140‑1 (MQ=21) aaGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCGTCTTCACCGCGCCACTGGCGGATGCGGCGTgggcg > 2:3073733/1‑136 (MQ=255) aaGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCCCCGCGCCACTGGCGGATGCGGCGTgggcg > 1:3292523/1‑136 (MQ=255) aaGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACg < 1:5420648/140‑1 (MQ=255) aaGCAATAATTTGCAACTGCTGGCGAATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACg < 1:3073733/140‑1 (MQ=255) aGCAATAATTTGCAACCGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGc < 2:6945169/140‑1 (MQ=255) ataatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTa < 2:6765700/140‑1 (MQ=255) ataatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTa < 2:5646171/140‑1 (MQ=255) taatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTAt < 2:835010/140‑1 (MQ=255) taatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTAt < 1:140367/140‑1 (MQ=255) aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCTGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATc < 2:4636868/140‑1 (MQ=255) aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATc < 1:5292554/140‑1 (MQ=255) aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATc < 1:1558041/140‑1 (MQ=255) aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATc < 1:435190/140‑1 (MQ=255) aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATc < 2:5461934/140‑1 (MQ=255) tttGCAACTGCTGGCGGCTGCGACGTAAACGTCTTCTCCACCCTACATTTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCg < 2:2255360/140‑1 (MQ=18) tGCAACTGCTGGCGGATGCGGCGTAAGCGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCTCCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGcc < 2:4112233/140‑1 (MQ=255) tGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCTCGCCACTGGCGCATGCGGCGTGGACACCTTATCCGcc > 1:2541279/1‑140 (MQ=18) tGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATc > 1:6827351/1‑136 (MQ=255) tGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGcc < 1:5181110/140‑1 (MQ=255) gCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGccc < 1:6213630/140‑1 (MQ=255) cAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCt < 1:725625/140‑1 (MQ=255) aaCTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTACAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGGCACTGGCTGATGCGGCGTGGAAGCCTTATCCGCCCTa > 1:2737428/1‑140 (MQ=17) aCTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTAc < 2:5285188/140‑1 (MQ=255) aCTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTAc < 1:5033917/140‑1 (MQ=255) aCTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTAc < 1:5938582/140‑1 (MQ=255) aCTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTAc < 1:246280/140‑1 (MQ=255) ctgctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACa > 1:4173456/1‑140 (MQ=255) ctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCCCCGCGCCAGTGGCGTAGGCGGCGGGTGCGCACTTTCCCCCCTAAAtgt > 2:3615924/1‑140 (MQ=17) ctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGGCGCCCTATCCGCCCTACAtgt > 2:1249317/1‑140 (MQ=255) ctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGAGGCGTGAACGCCTATTCCGCCCTACAcgt > 1:2413651/1‑140 (MQ=17) tgGCGGATGCGGCGTTAACGCCCTAACCGTCCTACATTTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgtg < 1:3615930/140‑1 (MQ=17) tgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgtg < 2:7158213/140‑1 (MQ=255) tgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgtg < 1:7302453/140‑1 (MQ=255) tgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgtg < 2:5781694/140‑1 (MQ=255) tgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgtg < 1:7207910/140‑1 (MQ=255) tgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCCTATCCGCCCCACAtgtg > 2:552488/1‑140 (MQ=255) gCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgtgca < 1:6129786/140‑3 (MQ=255) gCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgtgca < 1:875790/140‑3 (MQ=255) ggATGCGGCGTAAACGCATTATCCGCCCTACATGTCCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgtgcaat < 2:2889179/140‑5 (MQ=14) tGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGGGGCGTGGGCGCACTATCCGCCACACAtgtgcaattcc > 1:3133345/1‑133 (MQ=14) tGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgtgcaattcc > 1:1422552/1‑133 (MQ=255) tGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgtgcaa > 1:981469/1‑133 (MQ=255) cgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtg > 1:4031644/1‑126 (MQ=255) cgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtg < 2:4031644/126‑1 (MQ=255) | TATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCC > NC_000913/3231204‑3231397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |