BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	360,219	C→T	A76A (GCC→GCT)	cynX →	cyanate transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	360,219	0	C	T	99.6%	898.6 / ‑4.9	260	A76A (GCC→GCT)	cynX	cyanate transporter
Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (118/141); total (118/142)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.92e-01

Only 100 of 263 total aligned reads displayed.

GGAATGAGCTTTAGCGTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACG  >  NC_000913/360082‑360354

ggAATGAGCTTTAGCTTGGCTGACCTGTTCACCGCTCGGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGATTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGt                                                                                                                                       <  1:2203960/140‑1 (MQ=255)

ggAATGAGCTTTAGCGTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGt                                                                                                                                       <  1:7054922/140‑1 (MQ=255)

ggAATGAGCTTTAGCGTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGt                                                                                                                                       <  1:314226/140‑1 (MQ=255)

  aaTGAGCTTTAGCGTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCg                                                                                                                                     <  1:5474305/140‑1 (MQ=255)

  aaTGAGCTTTAGCGTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCg                                                                                                                                     <  1:4452014/140‑1 (MQ=255)

  aaTGAGCTTTAGCGTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCg                                                                                                                                     <  1:7237048/140‑1 (MQ=255)

         tttAGCGTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCAtt                                                                                                                              <  1:5121646/140‑1 (MQ=255)

            aGCGTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGAt                                                                                                                           >  2:552335/1‑140 (MQ=255)

            aGCGTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGAt                                                                                                                           >  1:409216/1‑140 (MQ=255)

               gTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCg                                                                                                                        <  1:6483312/140‑1 (MQ=255)

                tGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGt                                                                                                                       >  1:6659905/1‑140 (MQ=255)

                      cccTGTTGACCGCTCGGCCGGTGGTGACCATGGGCGGTCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCtt                                                                                                                 <  1:2493735/140‑1 (MQ=255)

                           ttGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCAACAGTCTGTTGCTGATTGCTGTCGGTCCATTAATGCGTGAGCTTTAccc                                                                                                            >  2:2950507/1‑140 (MQ=255)

                           ttGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCAACAGTCTGTAGCTGATTGCTGTCGGTCCATTAATGCGTGAGCTTTAccc                                                                                                            >  2:2834483/1‑140 (MQ=255)

                             gACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGc                                                                                                          >  2:5973001/1‑140 (MQ=255)

                              aCCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCa                                                                                                         <  1:1355788/140‑1 (MQ=255)

                              aCCGCTCTGCCGGTGGTTACCAAGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCa                                                                                                         <  1:3239114/140‑1 (MQ=255)

                              aCCGCTCTGCCGGTGGTAACCAAGGGCGGGCAGGCGCTGCCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCa                                                                                                         <  2:3045635/140‑1 (MQ=255)

                              aCCGCTCTGCCGGTGCTTACCACGGACGGCCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCa                                                                                                         <  1:3591641/140‑1 (MQ=255)

                                cGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGTTTGATGTCGGTGCATTCATGCTTGAGCTTTACCCGCaaa                                                                                                       >  2:3186182/1‑140 (MQ=255)

                                cGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGGTGCGTGAGCTTTACCCGCaaa                                                                                                       >  1:7435223/1‑140 (MQ=255)

                                cGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCaaa                                                                                                       >  1:4033622/1‑140 (MQ=255)

                                  ctctGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCtt                                                                                                                 <  2:6107260/128‑1 (MQ=255)

                                  ctctGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGt                                                                                                     >  1:4489879/1‑140 (MQ=255)

                                   tctGCCGGTGGTTACCATGGGCGGGCTGGTGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTg                                                                                                    <  1:3700356/140‑1 (MQ=255)

                                   tctGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTg                                                                                                    <  1:6177791/140‑1 (MQ=255)

                                     tGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTgcg                                                                                                  >  2:397285/1‑140 (MQ=255)

                                     tGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTgcg                                                                                                  <  2:4241827/140‑1 (MQ=255)

                                      gCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTgcgc                                                                                                 <  1:5856390/140‑1 (MQ=255)

                                      gCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTACATTGATGCGTGAGCTTTACCCGCAAAGTgcgc                                                                                                 <  2:1737801/140‑1 (MQ=255)

                                      gCCGGTGGTTACCATGGGCGGGATGGCGCGGGCCGGACGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTgcgc                                                                                                 <  1:2783629/140‑1 (MQ=255)

                                        cGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGATGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCgctg                                                                                               <  2:2478547/140‑1 (MQ=255)

                                        cGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCgctg                                                                                               <  2:661448/140‑1 (MQ=255)

                                           tggtTACCTTGGGCGGACTGGCTCTGGCCGGTAGCTGGCGTCATCAGCTTGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCgctgctg                                                                                            <  2:3625718/140‑1 (MQ=255)

                                           tggtTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCgctgctg                                                                                            <  2:5029838/140‑1 (MQ=255)

                                             gtTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCgctgctgct                                                                                          >  2:3925916/1‑140 (MQ=255)

                                             gtTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGATGTCGGTGCATTGAAGTATGAGCTTAACCCCCAAAGTGCgctgctgct                                                                                          >  2:3515571/1‑140 (MQ=255)

                                                aCCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTag                                                                                       <  1:865117/140‑1 (MQ=255)

                                                     gggcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAgcg                                                                                  <  1:7283964/140‑1 (MQ=255)

                                                     gggcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGGGAGCTTTGCCCACAAAGTGCGATGCTGCTTAGCAgcg                                                                                  >  1:1930042/1‑140 (MQ=255)

                                                      ggcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAgcgc                                                                                 >  2:5858643/1‑140 (MQ=255)

                                                       gcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCTTTGATGCGCGAGTTTTTCCCGCAAATTGCGCTGCTGCTTAGCAGCGCa                                                                                >  2:2674678/1‑140 (MQ=255)

                                                       gcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCa                                                                                <  2:4017169/140‑1 (MQ=255)

                                                       gcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCa                                                                                >  2:6241871/1‑140 (MQ=255)

                                                       gcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCa                                                                                <  1:117689/140‑1 (MQ=255)

                                                       gcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCa                                                                                <  1:3741123/140‑1 (MQ=255)

                                                          ggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTg                                                                             >  1:6074375/1‑140 (MQ=255)

                                                          ggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCCTTACCCGCAAAATGTGCTGCTGCTTAGCAGCGCACTg                                                                             >  1:2992174/1‑140 (MQ=255)

                                                            ctggcgctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTGCCCGCAAAGTGCGCTGCTGCTTAGCAgcg                                                                                  <  2:5121262/133‑1 (MQ=255)

                                                            ctggcgctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCa                                                                                <  2:5616565/135‑1 (MQ=255)

                                                              ggcgctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtg                                                                         <  1:5588282/140‑1 (MQ=255)

                                                               gcgctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATTCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtgg                                                                        <  2:4584696/140‑1 (MQ=255)

                                                               gcgctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCGAAGTGCGCTGCTGCTTAGCAGCGCa                                                                                <  1:1681670/132‑1 (MQ=255)

                                                               gcgctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtgg                                                                        <  1:6988339/140‑1 (MQ=255)

                                                               gcgctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtgg                                                                        <  2:736342/140‑1 (MQ=255)

                                                                cgctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtggt                                                                       <  2:921442/140‑1 (MQ=255)

                                                                cgctggcCGGAAGCCGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCTATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtggt                                                                       <  1:5525948/140‑1 (MQ=255)

                                                                    ggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTggtgggg                                                                   <  2:1315338/140‑1 (MQ=255)

                                                                     gcCGGAAGCTGGCTTCATCGGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCa                                                                                <  2:762472/126‑1 (MQ=255)

                                                                     gcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTagcagc                                                                                   >  1:1071547/1‑123 (MQ=255)

                                                                     gcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTagcagc                                                                                   <  2:1071547/123‑1 (MQ=255)

                                                                     gcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtggt                                                                       >  2:1677375/1‑135 (MQ=255)

                                                                     gcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTggtggggt                                                                  >  2:6902727/1‑140 (MQ=255)

                                                                     gcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTggtggggt                                                                  >  1:5633439/1‑140 (MQ=255)

                                                                      ccGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTggtggggtg                                                                 <  1:6800499/140‑1 (MQ=255)

                                                                          aaGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGa                                                             <  2:7530580/140‑1 (MQ=255)

                                                                           aGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGAt                                                            <  1:3880932/140‑1 (MQ=255)

                                                                              tGGCTTCATCAGCATGTCAGCGGACGTCGCAGTGTCGGCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCgg                                                         <  1:3320157/140‑1 (MQ=255)

                                                                               ggCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAGAGTGCGCTGCTGGTTATCAGCGCACTGCTTCGTGGGGTGGGGATCGGc                                                        >  2:2727017/1‑140 (MQ=255)

                                                                               ggCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGc                                                        <  1:5973001/140‑1 (MQ=255)

                                                                                gCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGca                                                       >  2:3871920/1‑140 (MQ=255)

                                                                                        aGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAg                                               <  2:6758670/140‑1 (MQ=255)

                                                                                        aGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAg                                               <  2:484585/140‑1 (MQ=255)

                                                                                         gCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAgg                                              <  1:3925916/140‑1 (MQ=255)

                                                                                          cATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGc                                             >  2:6575791/1‑140 (MQ=255)

                                                                                             gTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGt                                          >  1:6534271/1‑140 (MQ=255)

                                                                                                 gCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATg                                      <  1:6927804/140‑1 (MQ=255)

                                                                                                    aaCGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCt                                   >  1:4573916/1‑140 (MQ=255)

                                                                                                    aaCGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGAGCACTGCTCGGTGGGGTGGGGATCGCCATCATTCAGGCGGTGATGCCt                                   >  2:2779689/1‑140 (MQ=255)

                                                                                                     aCGTCGCAGTGTCGCCATCAGTATGTTGCTGATTGCTCTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCtt                                  <  1:2834483/140‑1 (MQ=255)

                                                                                                      cGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTc                                 <  2:4923651/140‑1 (MQ=255)

                                                                                                      cGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTc                                 <  2:649652/140‑1 (MQ=255)

                                                                                                      cGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATAATTCAGGCGGTGATGCCTTc                                 <  1:4789115/140‑1 (MQ=255)

                                                                                                        tCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCgg                               <  1:1283527/140‑1 (MQ=255)

                                                                                                            aGTGTCGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGT‑GGGTGGGGATCGGCATCAGTCAGGCGGTCATGCCTTCGGTGAtt                          >  1:3495721/1‑140 (MQ=255)

                                                                                                                 cGCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAAc                      >  2:6814840/1‑140 (MQ=255)

                                                                                                                  gCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAAcg                     <  2:4489879/140‑1 (MQ=255)

                                                                                                                  gCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAAcg                     <  2:7153951/140‑1 (MQ=255)

                                                                                                                  gCCATCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGAACGGCATCATTCAGGCGGTGATACCTTCGGTGATTAAAcg                     >  2:3332144/1‑140 (MQ=255)

                                                                                                                      tCAGTCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAAcggcgg                 >  2:6982743/1‑140 (MQ=255)

                                                                                                                          tCTGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTc             >  1:4207211/1‑140 (MQ=255)

                                                                                                                          tCTGCTGCTGATTGGTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAGAGTGCGCTGCTGCTTAGGAGCGCACTGGTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTc             <  2:4086931/140‑1 (MQ=255)

                                                                                                                            tGTTGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTcag           <  2:6153386/140‑1 (MQ=255)

                                                                                                                              ttGCTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTcagca         >  1:966587/1‑140 (MQ=255)

                                                                                                                                gCTGATTGCTGTCGGAGCATTGGTGGGTGAGCTTTACGCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCagcagc       <  1:2615481/140‑1 (MQ=255)

                                                                                                                                 cTGATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAgcg      <  1:1469184/140‑1 (MQ=255)

                                                                                                                                 cTGAGTGCGGCCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGGGCGCTGCTGCTTAGCAGCGGACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAgcg      <  2:1409610/140‑1 (MQ=255)

                                                                                                                                   gATTGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCa    <  1:4825857/140‑1 (MQ=255)

                                                                                                                                     ttGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACg  <  1:3952918/140‑1 (MQ=255)

                                                                                                                                     ttGCTGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACg  <  1:6134971/140‑1 (MQ=255)

GGAATGAGCTTTAGCGTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACG  >  NC_000913/360082‑360354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`