| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 458,096 | C→T | P224L (CCG→CTG) | clpX → | ATP‑dependent Clp protease ATP‑binding subunit ClpX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 458,096 | 0 | C | T | 99.5% | 1433.8 / ‑5.4 | 415 | P224L (CCG→CTG) | clpX | ATP‑dependent Clp protease ATP‑binding subunit ClpX |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base T (212/200); total (215/200) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 420 total aligned reads displayed.
GGTATTGTCTACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACCGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGCTCCGGCATTGG > NC_000913/457960‑458231 | gTATTGTCTACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCaa > 1:1046551/1‑140 (MQ=255) tATTGTCTACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACGGATAGAAGGTACTGTAGCTGCTGTTCCACTGCAAg > 2:2596440/1‑140 (MQ=255) tATTGTCTACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACAGATTGAAGGTACAGTAGTGGCTGTTCAACTGCAAg > 2:3679171/1‑140 (MQ=255) aTTGTCTACATCGATGACATCGGCAAGATTTCTTGCAAGTCAGACAACACGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAgg < 2:3345170/140‑1 (MQ=255) ttGTCTACATCGATGAAGTCGATAAGATTTCTCGTGAGTTAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGt < 2:2777171/140‑1 (MQ=255) ttGTCTACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGt < 2:7081112/140‑1 (MQ=255) tCTACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTggg > 1:1200920/1‑140 (MQ=255) tCTACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGCAGGTGCTGTTCCACTGCAAGGTggg > 1:3377032/1‑140 (MQ=255) tCTACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGAGCGAAGGTGCGGCAGCTGCTGTGCCACTGCAAggctgt > 1:2842433/1‑136 (MQ=255) tACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCg < 2:662063/140‑1 (MQ=255) tACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCg > 1:662063/1‑140 (MQ=255) tACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCg > 1:5394245/1‑140 (MQ=255) aTCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTaa > 2:4751959/1‑140 (MQ=255) aTCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTaa > 2:5781001/1‑140 (MQ=255) aTCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTaa > 2:32596/1‑140 (MQ=255) aTCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTaa > 2:6948749/1‑140 (MQ=255) aTCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTaa > 2:832733/1‑140 (MQ=255) aTCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTaa > 1:7434437/1‑140 (MQ=255) aTCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTaa > 1:728392/1‑140 (MQ=255) aTCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGCACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTaa > 2:5259168/1‑140 (MQ=255) aTCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGCCACAGCTGAAACGGATCGAAGGGACGCTAGCTGCTGTTCCCCTGCAAGGTGGGCGaaa > 2:2500843/1‑140 (MQ=255) tGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGTTCGAAGGTACGGGAGCGGCTGTTCCACTGCTAGGTGGGCGTAAACATc > 2:2228156/1‑140 (MQ=255) tGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTTCGGTAGCCGCTGTTCCACTGCAAGGTGGGCGTAAACATc > 2:3072754/1‑140 (MQ=255) tGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTggg > 2:5711048/1‑130 (MQ=255) tGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATc > 2:6287117/1‑140 (MQ=255) tGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACCGCAAGGTGGGCGTAAACATc > 1:4417092/1‑140 (MQ=255) aaaTCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCg < 1:7494767/140‑1 (MQ=255) aaTCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCAGTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCgc < 1:6291956/140‑1 (MQ=255) aaTCGACAAGATTTCGCGTAAGACATACAGCCCGTCCGTTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCgc < 1:3580763/140‑1 (MQ=255) gACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCgcagca < 1:4768920/140‑1 (MQ=255) aGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGaa < 1:6245236/140‑1 (MQ=255) ctcGTAAGTCAGACAGCCCGTCAATGTCCCGAGACGTGTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTg < 1:2406551/140‑1 (MQ=255) aGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGtt > 2:6140807/1‑140 (MQ=255) tCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGa < 1:5522013/140‑1 (MQ=255) tCAGACAACCCGTCCATGACCCTAGACGTTTACGGTGAAGGCGTACAGAAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGa < 2:2950309/140‑1 (MQ=255) cAGACAACCCGTCCATTTCCCGAGACGTTTCCGGTCAAGACGTACAGCGGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGAt < 2:2415762/140‑1 (MQ=255) cAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGAt < 2:6649527/140‑1 (MQ=255) cAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGAt < 2:3973668/140‑1 (MQ=255) cAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGAt < 1:6980990/140‑1 (MQ=255) aGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGa < 2:7257151/138‑1 (MQ=255) gACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGGTCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATAc < 1:7244139/140‑1 (MQ=255) gACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATAc < 1:3846496/140‑1 (MQ=255) gACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATAc < 1:1856129/140‑1 (MQ=255) gACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATAc < 2:3718939/140‑1 (MQ=255) cAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGa > 2:7438492/1‑135 (MQ=255) cccGTCCATTACCCGCGACGTTTCCTGTGTAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTa < 1:3287276/140‑1 (MQ=255) ccGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTaa > 2:4247801/1‑140 (MQ=255) ccGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTaa > 1:7559151/1‑140 (MQ=255) ccGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTaa > 1:4600770/1‑140 (MQ=255) ccGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTaa > 2:4120288/1‑140 (MQ=255) ccGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTaa < 2:6765422/140‑1 (MQ=255) ccATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATc < 1:6948749/140‑1 (MQ=255) ccATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATc < 2:7003267/140‑1 (MQ=255) ccATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATc < 1:4120288/140‑1 (MQ=255) aCCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGGAGGAATTCTTGGAGTTTGATAACTCTAAGATCCTGtt > 1:2336281/1‑140 (MQ=255) gagaCGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTAtt > 1:298026/1‑140 (MQ=255) ttCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCg < 1:5218044/140‑1 (MQ=255) ttCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCg < 2:1046551/140‑1 (MQ=255) tCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCgg > 2:5417418/1‑140 (MQ=255) gAAGGCGTACAGCAGGC‑CTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCggggagatt > 2:1150038/1‑133 (MQ=255) aGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTg < 1:5893463/140‑1 (MQ=255) ggCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGc < 1:5121619/140‑1 (MQ=255) ggCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGc > 1:5833401/1‑140 (MQ=255) ggCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGc > 1:6749850/1‑140 (MQ=255) ggCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACATCTAAGATCCTGATTATATGTGGCGGTGGGttttc > 2:3440735/1‑138 (MQ=255) aCAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTc < 2:1831800/140‑1 (MQ=255) cagGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTg < 2:5883715/130‑1 (MQ=255) ggCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGTCGGTCTGGGTa > 2:489070/1‑140 (MQ=255) ggCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATa < 1:832733/140‑1 (MQ=255) aCTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAg < 2:1308570/140‑1 (MQ=255) aCTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGGCTGGATaaaa > 2:5114596/1‑139 (MQ=255) tGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTTCCGGTCTGGATaaaaag > 2:1632590/1‑137 (MQ=255) ttGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGAt > 1:5987382/1‑140 (MQ=255) tGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGGCTTGATAAAAAGAtt > 2:6479469/1‑140 (MQ=255) aaaCTGATCGAAGGTACGGTAGCTGATGTACCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTc < 1:3712956/140‑1 (MQ=255) aaCTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTcc > 1:4273971/1‑140 (MQ=255) aaCTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTcc < 1:5743442/140‑1 (MQ=255) aCTGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTccc < 2:4408419/140‑1 (MQ=255) cTGATCGAAGGTAGGGTAGCTGTTGTTACACTGCAAGGTGGGCGTAAAGATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCa < 1:1455586/140‑1 (MQ=255) tGATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCAc < 2:1490714/140‑1 (MQ=255) gATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTTCCGGGCTGGGTAAAGTGATTTTCCAcc > 1:3978617/1‑140 (MQ=255) gATCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCAcc > 1:6113229/1‑140 (MQ=255) tCGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCgg > 1:4975444/1‑139 (MQ=255) cGAAGGTACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGCGCGTTTGACGGACTGGATAAATTGATTTCCCACCgtg > 1:2606855/1‑140 (MQ=255) tACGGTAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGGTAAAGTGATTTCCCACCGTGTAGaaa > 1:1279180/1‑140 (MQ=255) tAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGc < 2:7574670/140‑1 (MQ=255) tAGCTGCTGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGc < 1:1632590/140‑1 (MQ=255) gctgctGTTCCACTGCATGGTGAGCGTAAACCTCCCCAGCAGGAATTCCTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGCTc < 2:2124181/140‑1 (MQ=255) gctgctGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTGTGGATAAGGTGGTTTCCCACCTCGTAGAAAACGGCTc > 1:2124181/1‑140 (MQ=255) gctgctGTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGCTc > 1:275167/1‑140 (MQ=255) gctgctGTACCACTGCCGGGTGAGCGTAAAGTTCCTCAGAAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGCTc < 2:3627140/140‑1 (MQ=255) tgctgTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGCGATATCACACCGGGTAGAAACCGGCTCCg > 1:2570034/1‑140 (MQ=255) gctgTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGTGTAAAGTGATTGTCAACCGTGTAGAAACCGGCCCCgg > 1:2043986/1‑140 (MQ=255) gctgTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGGTAAAGTAATTATCTACCGTGGAGAAACCGGCTCCgg > 1:2513360/1‑140 (MQ=255) gctgTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAAACGGCTCCgg > 2:7417126/1‑140 (MQ=255) gctgTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGGCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGCTCCgg > 2:4578792/1‑140 (MQ=255) ctgTTCCACTGCAAGGTCGGCGCAAACATCCACAGCAGGCATTCTTGTTGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGCTCCGGc < 2:1996113/140‑1 (MQ=255) gTTCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGCGCGTTTGGCGGGCTGGATAAAGTGATTTCCCACCCTGTAGGAACCGGCTTCGGCAt > 2:5621718/1‑140 (MQ=255) ttCCACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGCTCCGGCAtt > 1:6781786/1‑140 (MQ=255) ccACTGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACTCTATAGAAATCCGCTCCGGCATTgg > 1:3494152/1‑140 (MQ=255) | GGTATTGTCTACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACCGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGCTCCGGCATTGG > NC_000913/457960‑458231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |