BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,880,097	G→A	S8F (TCC→TTC)	gyrB ←	DNA gyrase subunit B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,880,097	0	G	A	99.6%	1838.8 / NA	530	S8F (TCC→TTC)	gyrB	DNA gyrase subunit B
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (248/279); minor base T (0/2); total (248/282)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 544 total aligned reads displayed.

CGCGAGCGCTTCGTCGATAGCGTTATCTACCACCTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGGAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACGTGTTCAGCACTGATCGCGC  >  NC_000913/3879961‑3880233

cgcgAGCGCTTCGTCGATAGCGTTATCTACCACCTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTgaagg                                                                                                                                       <  2:1082118/140‑1 (MQ=255)

   gAGCGCTTCGTCGATAGCGTTATCTACCACCTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGAGCTTACGCACCGAATCGAGCCCTTTCAGGAATTTGATACTGAAGGAGt                                                                                                                                    >  2:2473659/1‑140 (MQ=255)

      cgcTTCGTGGATAGCGGAATCTGCCACCTCGAATAGCATGTGGTGCAGCCCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCAt                                                                                                                                 <  2:3645758/140‑1 (MQ=255)

                aTAGCGTTATCTACCACCTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGCGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGa                                                                                                                       <  2:5836006/140‑1 (MQ=255)

                 tAGCGTTATCTACCACCTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGAc                                                                                                                      >  1:7275908/1‑140 (MQ=255)

                        aTCTACCACCTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACg                                                                                                               <  1:1218780/140‑1 (MQ=255)

                              caccTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTtctc                                                                                                         >  2:7339124/1‑140 (MQ=255)

                              caccTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTtctc                                                                                                         >  2:4759627/1‑140 (MQ=255)

                               accTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCg                                                                                                        <  1:5534275/140‑1 (MQ=255)

                               accTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCg                                                                                                        <  1:6920858/140‑1 (MQ=255)

                               accTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCg                                                                                                        >  1:1735940/1‑140 (MQ=255)

                               accTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCg                                                                                                        <  1:1597558/140‑1 (MQ=255)

                               accTCGAATACCATGAGGTGCAAACTGGTTCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCg                                                                                                        <  1:3130821/140‑1 (MQ=255)

                                ccTCGAATACCATGTGGTGCAGCCCGGTGCCTTCAACCGTGTCGCCGACATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGc                                                                                                       <  2:1988815/140‑1 (MQ=255)

                                ccTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGc                                                                                                       <  1:1449540/140‑1 (MQ=255)

                                 cTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCt                                                                                                      <  1:6164778/140‑1 (MQ=255)

                                 cTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCt                                                                                                      <  2:1892022/140‑1 (MQ=255)

                                   cGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCg                                                                                                        >  2:4956946/1‑136 (MQ=255)

                                   cGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCg                                                                                                        <  2:571506/136‑1 (MQ=255)

                                   cGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCa                                                                                                    >  2:213875/1‑140 (MQ=255)

                                   cGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCa                                                                                                    >  1:4420353/1‑140 (MQ=255)

                                   cGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCa                                                                                                    >  1:6079699/1‑140 (MQ=255)

                                   cGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATCCGACATCAACGTTTCTCGCTCa                                                                                                    >  1:3032674/1‑140 (MQ=255)

                                     aaTACCATGTGGTGCAGACCGGGGCCGTCCTCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCAtt                                                                                                  <  1:3111141/140‑1 (MQ=255)

                                          cATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATAc                                                                                             <  1:5887357/140‑1 (MQ=255)

                                             gtggtgCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTg                                                                                          >  1:3790142/1‑140 (MQ=255)

                                               ggtgCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTggg                                                                                        >  1:1636087/1‑140 (MQ=255)

                                               ggtgCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTggg                                                                                        >  2:5564276/1‑140 (MQ=255)

                                                   cAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTaa                                                                                    >  1:489279/1‑140 (MQ=255)

                                                      aCCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTa                                                                                     <  1:247938/136‑1 (MQ=255)

                                                      aCCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATcc                                                                                 >  2:3904721/1‑140 (MQ=255)

                                                      aCCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATcc                                                                                 >  1:6552129/1‑140 (MQ=255)

                                                       ccGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCg                                                                                <  1:1005013/140‑1 (MQ=255)

                                                        cGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATcc                                                                                 <  2:1761213/138‑1 (MQ=255)

                                                        cGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACAGCAACGTTACTCGCTGATTTATGCTTGGGTTAATCCGt                                                                               >  1:2279093/1‑140 (MQ=255)

                                                          gTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTa                                                                             >  2:4323066/1‑140 (MQ=255)

                                                           tGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTAt                                                                            >  2:6757524/1‑140 (MQ=255)

                                                           tGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTAt                                                                            >  1:736481/1‑140 (MQ=255)

                                                                tCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTAc                                                                       >  1:6302675/1‑140 (MQ=255)

                                                                tCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTAc                                                                       >  2:6026949/1‑140 (MQ=255)

                                                                    ccGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATAAACGTTTCACGCACATATATACTTGGGTTATTCCGTTATTTTACCCtt                                                                   >  2:2246848/1‑140 (MQ=255)

                                                                       tgtCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTAcc                                                                      <  2:1284353/134‑1 (MQ=255)

                                                                       tgtCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTc                                                                <  2:6385968/140‑1 (MQ=255)

                                                                         tCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCa                                                              <  2:6133263/140‑1 (MQ=255)

                                                                         tCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCa                                                              <  1:5487608/140‑1 (MQ=255)

                                                                         tCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCa                                                              <  2:5457342/140‑1 (MQ=255)

                                                                            ccGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCtttt                                                                 >  1:1387699/1‑134 (MQ=255)

                                                                                tataCATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTaaa                                                       >  1:576720/1‑140 (MQ=255)

                                                                                         ccGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATTCTTGGGTTGATCGGTTGTTTTACCCGTTTCTACGGTAAACATCTTCGa                                              >  2:2852401/1‑140 (MQ=255)

                                                                                         ccGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGa                                              >  2:6273267/1‑140 (MQ=255)

                                                                                            ggCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATTCGTGATTATACCCTTTGCCACGATAAACATTTTCGAAtt                                           >  2:3544843/1‑140 (MQ=255)

                                                                                            ggCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATGCGTCATTTTACCCTTTCCCACGGTAAACATCTTCGAAtt                                           >  2:2580691/1‑140 (MQ=255)

                                                                                            ggCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAAtt                                           >  2:4182825/1‑140 (MQ=255)

                                                                                            ggCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAAtt                                           >  1:5438390/1‑140 (MQ=255)

                                                                                            ggCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAAtt                                           >  1:4213748/1‑140 (MQ=255)

                                                                                            ggCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAAtt                                           >  2:6545101/1‑140 (MQ=255)

                                                                                             gcgcTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAAttt                                          >  1:4707580/1‑140 (MQ=255)

                                                                                              cgcTTACGCACCGCATCCAGCCGTTGCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAAtttt                                         <  1:2634645/140‑1 (MQ=255)

                                                                                              cgcTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAAtttt                                         >  1:6382141/1‑140 (MQ=255)

                                                                                              cgcTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTGATTTTACGCTTGTCGACGGTAGACATCTTCGAAtttt                                         >  1:1961268/1‑140 (MQ=255)

                                                                                              cgcTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCCTTAGTCTCCCCTTTTCCACGGTTAACATCTTCGAAtttt                                         >  2:3260426/1‑140 (MQ=255)

                                                                                                 ttACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGt                                      >  2:5127360/1‑140 (MQ=255)

                                                                                                     gCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGa                                  <  2:901254/140‑1 (MQ=255)

                                                                                                     gCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGa                                  <  2:1636087/140‑1 (MQ=255)

                                                                                                     gCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGa                                  <  2:3808539/140‑1 (MQ=255)

                                                                                                     gCACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGa                                  <  2:1558247/140‑1 (MQ=255)

                                                                                                     gCACCGCATCCAGCCCGTTCAGTACTTTGATGCGGAAGGTGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGa                                  <  2:3355949/140‑1 (MQ=255)

                                                                                                      cACCGCATCCAGCCCTTTCAGGGCTTTGATACTGACGGAGTCATAAGATTTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGAc                                 <  2:3124367/140‑1 (MQ=255)

                                                                                                      cACCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGAc                                 <  2:7198479/140‑1 (MQ=255)

                                                                                                       aCCGCATCCAGCCCTTTCAGGACTTTGATTCTGAAGGGGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACa                                <  1:3428727/140‑1 (MQ=255)

                                                                                                       aCCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACa                                <  1:941413/140‑1 (MQ=255)

                                                                                                       aCCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACa                                <  1:6761362/140‑1 (MQ=255)

                                                                                                       aCCGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACa                                <  1:1851009/140‑1 (MQ=255)

                                                                                                       aCCGCATCCAGCCCTTTCAGGACTTGGATTCTGAAGGCGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACa                                <  1:2924546/140‑1 (MQ=255)

                                                                                                       aCCGCATCCAGCCCTTTCAGGAATTTGATCCTGAAGGTGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACa                                <  1:3606914/140‑1 (MQ=255)

                                                                                                       aCCGCATCCAGCCCTTTCAGGAATTTGATACCGAACGAGTCATAAGAACTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACa                                <  2:2761721/140‑1 (MQ=255)

                                                                                                       aCCGCATCCAGCCCTTCCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACa                                <  2:4591178/140‑1 (MQ=255)

                                                                                                         cGCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATg                              <  2:6796172/140‑1 (MQ=255)

                                                                                                          gCATGCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGt                             <  1:5137432/140‑1 (MQ=255)

                                                                                                          gCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAAttt                                          >  2:4260987/1‑127 (MQ=255)

                                                                                                          gCATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGt                             >  2:6702093/1‑140 (MQ=255)

                                                                                                           cATCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTTAACATCATCGAATTTTCGTCCGACATGTc                            >  1:2761721/1‑140 (MQ=255)

                                                                                                            aTCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCt                           <  1:213875/140‑1 (MQ=255)

                                                                                                            aTCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCt                           <  2:295721/140‑1 (MQ=255)

                                                                                                            aTCCAGCCCTTTCAGCACTTTGATACTGACGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCt                           <  1:3551047/140‑1 (MQ=255)

                                                                                                             tCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCta                          >  1:5678988/1‑140 (MQ=255)

                                                                                                             tCCAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCta                          >  1:7051097/1‑140 (MQ=255)

                                                                                                               cAGCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCtata                        <  1:7173854/140‑1 (MQ=255)

                                                                                                                 gCCCTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAAc                      <  2:7038019/140‑1 (MQ=255)

                                                                                                                   ccTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACgt                    >  2:5337346/1‑140 (MQ=255)

                                                                                                                    cTTTCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACgtg                   <  1:6678170/140‑1 (MQ=255)

                                                                                                                      ttCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACGTGtt                 >  2:4025382/1‑140 (MQ=255)

                                                                                                                      ttCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACGTGtt                 >  1:4300221/1‑140 (MQ=255)

                                                                                                                       tCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACGTGtt                 >  2:1419672/1‑139 (MQ=255)

                                                                                                                       tCAGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACGTGTTc                <  1:5337346/140‑1 (MQ=255)

                                                                                                                         aGGACTTTGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACGTGTTCAg              >  1:1146579/1‑140 (MQ=255)

                                                                                                                                tGATACTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACG‑GTTCAGCACTGATc      >  2:5917337/1‑140 (MQ=255)

                                                                                                                                   tACTGAAGGAGTCATAAGAATTTGATATCAACGTTTCCCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACGTGTTCAGCACTGATcgc    <  1:3274018/140‑1 (MQ=255)

                                                                                                                                     cTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACGTGTTCAGCACTGATCgcgc  <  1:870734/140‑1 (MQ=255)

                                                                                                                                     cTGAAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACGTGTTCAGCACTGATCgcgc  <  1:3927195/140‑1 (MQ=255)

CGCGAGCGCTTCGTCGATAGCGTTATCTACCACCTCGAATACCATGTGGTGCAGACCGGTGCCGTCATCCGTGTCGCCGATATACATACCCGGGCGCTTACGCACCGCATCCAGCCCTTTCAGGACTTTGATACTGGAGGAGTCATAAGAATTCGACATCAACGTTTCTCGCTCATTTATACTTGGGTTAATCCGTTATTTTACCCTTTTCCACGGTAAACATCTTCGAATTTTCGTCCGACATGTCTATAACGTGTTCAGCACTGATCGCGC  >  NC_000913/3879961‑3880233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`