| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 484,656 | T→C | T322A (ACC→GCC) | acrA ← | multidrug efflux pump membrane fusion lipoprotein AcrA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 484,656 | 0 | T | C | 99.6% | 1665.5 / ‑4.7 | 456 | T322A (ACC→GCC) | acrA | multidrug efflux pump membrane fusion lipoprotein AcrA |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (236/217); total (238/218) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
Only 100 of 476 total aligned reads displayed.
ACTTTCTGCAGCCCACTTATTACTACGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGTGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATCCGGGTTCGGGAAGATAGCGCGT > NC_000913/484520‑484792 | cTTTCTGCAGCCCACTTATTACTACGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCa > 2:4829205/1‑140 (MQ=255) cTTTCTGCAGCCCACTTATTACTACGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCa > 2:4274282/1‑140 (MQ=255) agacAGCCC‑CTTATTGTGACGCGATCGCCTGCTTTGAGACCTTCTGTCTCCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGAAGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGcc < 2:3521558/137‑1 (MQ=255) aGCCCACTTATTACTACGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCAcg < 2:5669168/140‑1 (MQ=255) aGCCCACTTATTACTACGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCAcg < 2:3873568/140‑1 (MQ=255) aGCCCACTTATTACTACCCGATCGCCTGCTTACAGCCCTCCTGTCACCTGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCAcg < 2:2029370/140‑1 (MQ=255) ttattaCTACGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTa < 2:4469648/140‑1 (MQ=255) ttattaCTACGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTa < 1:5072795/140‑1 (MQ=255) ttattaCTACGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTa < 2:5421063/140‑1 (MQ=255) ttattaCTACGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTa < 2:4060548/140‑1 (MQ=255) taattaCTACGCGATCAACTGCTTTCAGACCTTATATCAACAGCCACTGATCGCCAATAGCTTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCTAACTACCAGTACGGCGGCATCGCCACGCGGCGTa < 2:3698131/138‑1 (MQ=255) tattaCTACGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTAc < 1:4829205/140‑1 (MQ=255) actacGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGTTCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGt > 2:7198025/1‑140 (MQ=255) actacGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGt > 1:882894/1‑140 (MQ=255) actacGCGATCGCCTACTTTCACACTTTCAGTCACCAACCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGt < 1:2534623/140‑1 (MQ=255) ctacGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGtt < 1:5195893/140‑1 (MQ=255) tacGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACGACCAGTACGGCAGCGTCGCCAGGCGGCGTagctgtct > 1:3521558/1‑133 (MQ=255) cgcgATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACg > 2:1034263/1‑140 (MQ=255) cgcgATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACg > 1:4676889/1‑140 (MQ=255) cgcgATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACg > 2:6788868/1‑140 (MQ=255) gcgATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCAcg < 1:1001931/123‑1 (MQ=255) gcgATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCAcg < 1:5547861/123‑1 (MQ=255) gcgATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGc > 2:4364990/1‑140 (MQ=255) gcgATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGc > 2:6922468/1‑140 (MQ=255) gcgATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGc > 1:1759261/1‑140 (MQ=255) gcgATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGc > 1:7198996/1‑140 (MQ=255) cgATCGCCTGCTTTCAGTCCTTTTGTCACCAGCCAGTTATCGCCAATATCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGcc < 2:2808291/140‑1 (MQ=255) gATCGCCTGCTTTCATACCTTCTGTCACCCGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGccc < 1:3156558/140‑1 (MQ=255) gATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTa < 1:7291974/128‑1 (MQ=255) tCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCGTCGCCAAGCGGCGAACGGGTTACGCCCTg > 1:3704644/1‑140 (MQ=255) tCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTATGCCCTg > 1:6451797/1‑140 (MQ=255) gCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGtt > 2:7525773/1‑140 (MQ=255) ccTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGtt < 2:7307873/129‑1 (MQ=255) cggCTTCCAGACCTTCTGTCACGAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGc < 2:6673065/138‑1 (MQ=255) cTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGc < 1:266637/140‑1 (MQ=255) gCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCgg < 1:5390859/140‑1 (MQ=255) gCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCgg < 2:5878113/140‑1 (MQ=255) cTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCggg > 2:6823131/1‑140 (MQ=255) tttCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGa < 1:1130191/140‑1 (MQ=255) tttCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGa < 1:5260292/140‑1 (MQ=255) tCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATAGCCACGCGGCGGACAGGTTACGCCCTGTTGCGGGACt > 1:2200672/1‑140 (MQ=255) gACCTTCTGTCACCAGCCACTTCTCGCCATTAGCCTGACTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTaaa < 1:2610399/140‑1 (MQ=255) tCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGGGTAGGGGTTACGACCTGATGCGGGACTAAAATAGc > 2:2120704/1‑140 (MQ=255) tCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGGGTAAGGGTTACGGCCTGGTGCGGGACTAAAATAGc > 2:2277282/1‑140 (MQ=255) tGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGt < 1:5949650/140‑1 (MQ=255) gCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTa > 1:4021623/1‑140 (MQ=255) gCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTa > 2:1183619/1‑140 (MQ=255) ccACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTaa > 1:4238848/1‑140 (MQ=255) ccACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTaa > 2:1314024/1‑140 (MQ=255) cTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGcc < 2:5933643/140‑1 (MQ=255) cTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGcc < 2:183347/140‑1 (MQ=255) tATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCct < 1:5882195/140‑1 (MQ=255) tATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCct < 1:1265195/140‑1 (MQ=255) tCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCACCAACTACCAGTACGGCGCCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCcttc > 2:4974552/1‑140 (MQ=255) tAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGa > 1:6280146/1‑140 (MQ=255) tAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGa > 1:6592480/1‑140 (MQ=255) tAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGa > 1:731096/1‑140 (MQ=255) tAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGa > 1:5787848/1‑140 (MQ=255) tAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGAGACTAAAGTAGGGTATGGATTGAGCCCTTCTTCCAGa > 1:1982979/1‑140 (MQ=255) aGCCTGGCTTGCAACGATCGGAAGGGTTTCCCCTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGAc < 2:2646431/140‑1 (MQ=255) cTGGCTTGCAACGATCGAACGGTTTTCCACTCTGTAATCGGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTg < 2:2532702/140‑1 (MQ=255) ggCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTgcg < 2:882894/140‑1 (MQ=255) ggCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTgcg < 2:1759261/140‑1 (MQ=255) gCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTgcgc > 1:1441391/1‑140 (MQ=255) gCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTgcgc > 1:1589904/1‑140 (MQ=255) tGCAACGATCGGACGTGTTTCCCCTTTGTCATCCGCGTCTACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCa < 1:2062803/140‑1 (MQ=255) aaCGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGa < 2:1441391/140‑1 (MQ=255) aaCGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGa < 2:4160314/140‑1 (MQ=255) aTCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACAt > 1:620120/1‑140 (MQ=255) tCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATa < 2:533517/140‑1 (MQ=255) tCGGACGGGTTTCCACTCTGTCATCCGCGCCTACTTCCACTACGGCGGTATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATa < 2:1959447/140‑1 (MQ=255) ggACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATAcc < 1:6922468/140‑1 (MQ=255) aCGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACCCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCa < 1:434654/128‑1 (MQ=255) cGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCg > 1:1846502/1‑139 (MQ=255) gTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCAGGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGAGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGgcag < 2:3073645/140‑1 (MQ=255) gTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGgcag > 2:4223250/1‑140 (MQ=255) tttCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGgcagc < 1:672076/140‑1 (MQ=255) tttCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGgcagc > 1:7459023/1‑140 (MQ=255) ttCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGgcagca < 2:461969/140‑1 (MQ=255) ttCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGgcagca > 1:7572850/1‑140 (MQ=255) ttCCACTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGgcagca < 1:985030/140‑1 (MQ=255) cTTTGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAgtg < 1:5450226/140‑1 (MQ=255) tGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGTGCAGGACCATACCAGGCAGCAGAGTGTGa > 1:2293367/1‑140 (MQ=255) tGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGGGCAAGAACATACCCGGCAGCAGAGTGTGa > 1:3262067/1‑140 (MQ=255) tGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGa > 1:4494988/1‑140 (MQ=255) tGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGa > 2:1676957/1‑140 (MQ=255) tGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGa > 2:6016814/1‑140 (MQ=255) tGTCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGa > 2:5185588/1‑140 (MQ=255) tCATCCGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATc < 2:7266868/140‑1 (MQ=255) ccGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTATGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATCCggg < 2:6451797/140‑1 (MQ=255) ccGCGCCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATCCggg < 1:6388610/140‑1 (MQ=255) ccGCGCCAACTACCAGAGCGGCTGCATCGCCCCCCAGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATCCggg < 2:3349969/140‑1 (MQ=255) gcgcCAACTACCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATCCGGGtt > 1:3920210/1‑140 (MQ=255) aCCAGTACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATCCGGGTTCGGGAAGAt < 2:6241573/140‑1 (MQ=255) cAGTACGGCGGCATCACCACGCAGCCTACTGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATCCGGGTTCGGGAAGATAg < 1:3064756/140‑1 (MQ=255) tACGGCGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATCCGGGTTCGGGa > 2:6345294/1‑131 (MQ=255) aCGGCGGCATCGCCACGCGGCGGACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATCCGGGTTCGGGAAGATAGcgcg < 1:3443649/140‑1 (MQ=255) cggcggCATCGCCCCGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATCCGGGTTCGGGAAGATAGcgcg > 2:5535230/1‑139 (MQ=255) cggcggCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATCCGGGTTCGGGAAGATAGCGCGt > 1:4165448/1‑140 (MQ=255) cggcggCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACAAACATACCCGGCAGTAGAGTGTGATACGGGGGCGGGAAGATAGCGCGt > 2:3297616/1‑140 (MQ=39) | ACTTTCTGCAGCCCACTTATTACTACGCGATCGCCTGCTTTCAGACCTTCTGTCACCAGCCACTTATCGCCAATAGCCTGGCTTGCAACGATCGGACGGGTTTCCACTTTGTCATCCGCGCCAACTACCAGTACGGTGGCATCGCCACGCGGCGTACGGGTTACGCCCTGTTGCGGGACTAAAATAGCGTTTGGATTAAGCCCTTCTTCCAGACGTGCGCGCACGAACATACCCGGCAGCAGAGTGTGATCCGGGTTCGGGAAGATAGCGCGT > NC_000913/484520‑484792 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |