| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,194,668 | A→G | S478P (TCG→CCG) | thiC ← | phosphomethylpyrimidine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,194,668 | 0 | A | G | 99.5% | 1391.7 / NA | 390 | S478P (TCG→CCG) | thiC | phosphomethylpyrimidine synthase |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (210/175); total (213/177) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 398 total aligned reads displayed.
GTGGGCAGCAATCTTATAGGTGATAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGACGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCACGTGGCCTGGGCCTTCA > NC_000913/4194534‑4194804 | gTGGGCAGCAATCTTATAGGTGATAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAACATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGa < 1:1660999/140‑1 (MQ=255) tGGGCAGCAATCTTATAGGTGATAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGaa > 1:5032636/1‑140 (MQ=255) gggCAGCAATCTTATAGGTGATAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAg < 2:6551567/140‑1 (MQ=255) ggCAGCAATCTTATAGGTGATAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGt < 1:3899539/140‑1 (MQ=255) gcagcaATCTTATAGGTGATAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCAGCGTGAAGTg > 1:1496284/1‑140 (MQ=255) ttATAGGTGATAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGcc < 2:4457106/140‑1 (MQ=255) ttATAGGTGATAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTAATAGcc < 1:804670/140‑1 (MQ=255) ttATAGGTGATAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCACATGCTCTTTTGGCGTTACGTAACAGTGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCTCCAATCCCCGGCGTGAAGTGGTCATAGcc < 1:1897615/140‑1 (MQ=255) gATAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCaa > 2:265750/1‑140 (MQ=255) aTAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGTACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAat > 2:4818327/1‑140 (MQ=255) aTAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAat > 2:3015080/1‑140 (MQ=255) aTAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTATTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAAACATCGCCGCACCAACCCTCGGCGTGAAGTGGCCATAGCCGGGCGCAat > 2:3594854/1‑140 (MQ=255) tAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAata > 2:5180348/1‑140 (MQ=255) ccTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTa > 2:6691377/1‑140 (MQ=255) ccTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCAGCACCAATTCCCAGCGAGAAGTGGTAATAGACCCGCGCAATATCGGTa > 2:3284615/1‑140 (MQ=255) cTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGACGTAAAGTGGTCATAGCGCGGCGCAATATCggctg > 2:2879181/1‑137 (MQ=255) tGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGt > 2:4986211/1‑140 (MQ=255) cTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTa > 1:4447059/1‑140 (MQ=255) ttAACATCTTCTTTATTGGGCAGACCCAGCTGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAg < 1:3350138/140‑1 (MQ=255) ttAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAg < 2:6487533/140‑1 (MQ=255) ttAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAg < 1:6809105/140‑1 (MQ=255) tcttctTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGccc < 1:34425/140‑1 (MQ=255) tcttctTTATTGGGCACACCCACATGCTCTTTTGGTGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGccc < 2:3245253/140‑1 (MQ=255) cagtcttTATTGGGCTGACCCAAATCCTCCTTTGGCGATACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGccc < 1:2703375/137‑1 (MQ=255) ttcttTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCa < 2:1430794/140‑1 (MQ=255) ttcttTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCa < 1:5209739/140‑1 (MQ=255) ttcttTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCa < 1:5335521/140‑1 (MQ=255) tcttTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAg < 1:6203849/131‑1 (MQ=255) tcttTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCag > 2:1362437/1‑140 (MQ=255) tcttTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCa < 1:7248092/139‑1 (MQ=255) tcttTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGCCGTGAAGTCGTCATAGCCCGGCGCAATATCCGTAGTTAGCGGCCCCag > 2:3167859/1‑140 (MQ=255) tcttTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGACGTGAAGTAGTCGTAGGCCGGCGCAATATCGGTAGTTAGCGGCCCCag > 2:2067831/1‑140 (MQ=255) ttATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGTAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAgt < 2:6097988/140‑1 (MQ=255) ggCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTaaaa > 2:34530/1‑140 (MQ=255) cAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATTGGTAGTTAGCGGCCCCAGAGTGTAAAACg > 1:3262732/1‑140 (MQ=255) ccccAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAATCCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCACAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGgcg < 2:1058295/139‑1 (MQ=255) aCCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCGATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGgcg > 1:3110392/1‑140 (MQ=255) aCCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGgcg > 1:5534992/1‑140 (MQ=255) aCCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGgcg > 2:1631401/1‑140 (MQ=255) aCCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGgcg > 1:6500626/1‑140 (MQ=255) aCCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGgcg > 2:535871/1‑140 (MQ=255) aCCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGACCCCAGAGTGTAAAACGgcg > 1:6674408/1‑140 (MQ=255) cccAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGgcgc > 1:7390474/1‑140 (MQ=255) ctctTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGc < 1:4097820/140‑1 (MQ=255) tctTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCa < 1:240200/140‑1 (MQ=255) tctTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCa > 1:4733993/1‑140 (MQ=255) tctTTTGGCGTTACGTAACAGACCATCGCTCAGCCAACCCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCa < 1:3167859/140‑1 (MQ=255) ctTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAg < 2:5949751/140‑1 (MQ=255) ctTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAg < 2:6972244/140‑1 (MQ=255) ttttGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCa < 2:5556506/138‑1 (MQ=255) ttttGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCa < 2:7089330/138‑1 (MQ=255) ttttGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGAGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGt > 2:1478154/1‑140 (MQ=255) tttGGCGTTAGGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTg < 1:5415116/140‑1 (MQ=255) tGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGct < 2:4733993/140‑1 (MQ=255) ttACGTAACAGAGCATCGCGCAGCCCAACTAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAAc < 1:3594854/140‑1 (MQ=255) ttACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGctct > 2:1109869/1‑137 (MQ=255) ttACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAAc < 2:1732653/140‑1 (MQ=255) aCGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAActc < 2:3803952/140‑1 (MQ=255) gTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAActcct < 1:4340491/140‑1 (MQ=255) aCAGAGCATCGCGCAACCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCgg < 1:2644853/140‑1 (MQ=255) agagCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTCAAACGGCCCTTAGTGGCAGTGATCTAActcatgtctc > 1:2956083/1‑133 (MQ=255) gCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCata > 1:919578/1‑140 (MQ=255) cATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAACACGGCGCATCGTGGCAGTGCTCTAACTCCTCGGTCatat > 2:2544938/1‑140 (MQ=255) cATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAActc > 2:7317971/1‑129 (MQ=255) cATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCatat > 2:3955956/1‑140 (MQ=255) cATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCatat > 2:4057195/1‑140 (MQ=255) cATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCatat > 1:7181948/1‑140 (MQ=255) cATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCatat > 1:6378413/1‑140 (MQ=255) cATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGGGACAGTGCTCTGACTCCTCGGTCatat > 1:2489023/1‑140 (MQ=255) cATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAAAGGCGCTTAGTGGCAGTGCTCTAACTCCTCGGTCatat > 1:3613151/1‑140 (MQ=255) aTCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAGCGGGGCTCCGTGGCAGAGCTCGAACTCCTCGGTCATAtt > 2:2973265/1‑140 (MQ=255) cgcgCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGATTGTAAAACCGCGATTCCTGGCAGTGATCTAACTCCTCGGTCATATTgc > 2:2466756/1‑140 (MQ=255) cgcgCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGGGCTTCGTGGCAGTGCTCTAACCCCTCGGTCATATTgc > 1:2798543/1‑140 (MQ=255) cgcgCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTgc > 1:1746491/1‑140 (MQ=255) cgcgCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTgc < 1:1039291/140‑1 (MQ=255) cgcAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTTTAAAACGGCGCTGCGTTGCAGTGCTATAACTCCTCGGTCATATTgcgg > 2:2282022/1‑140 (MQ=255) cgcAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTgcgg > 1:5855135/1‑140 (MQ=255) cgcAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTgcgg > 1:6995738/1‑140 (MQ=255) cgcAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTgcgg > 1:3729400/1‑140 (MQ=255) cgcAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTgcgg > 2:6269188/1‑140 (MQ=255) cAGCCAAACCAGCCACTCATCGCCGGACCAATCCCCGTCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTgcggcg < 1:2553328/140‑1 (MQ=255) cAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTgcggcg > 2:5759005/1‑140 (MQ=255) aGCCAAACCAGCCAATGTTCGCCGCACCAAATCCCAGCGAGAAGTGGTTATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGcggcgg < 2:3638287/140‑1 (MQ=255) ccAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGat > 2:4610112/1‑140 (MQ=255) cAAACCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGatc < 1:48670/140‑1 (MQ=255) aaaCCAGCCAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGatca < 1:6010623/140‑1 (MQ=255) gCCAATCATCGCCGCACCAATCCCCGGCGTGCAGTGGTCCTAGCCCGGAGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCa < 2:2715395/140‑1 (MQ=255) ccAATCATCGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCAt < 2:7222542/140‑1 (MQ=255) ccAATCATCGCCGCACCAATCCACGTCGTCAAGTGGTTATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCAt < 1:2067831/140‑1 (MQ=255) catcGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCa > 2:5431321/1‑140 (MQ=255) atcGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCAGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCAc < 2:4333270/140‑1 (MQ=255) tcGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCACg < 1:399609/140‑1 (MQ=255) tcGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCACg < 1:1362437/140‑1 (MQ=255) tcGCCGCACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCACg < 1:5708804/140‑1 (MQ=255) cgccgcACCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCACGt > 1:1146232/1‑140 (MQ=255) aCCAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCACGTGGCCTg > 2:4198907/1‑140 (MQ=255) ccAATCCCCGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCACGTGGCCTgg < 1:4610112/140‑1 (MQ=255) ccccGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCACGTGGCCTGGGCCtt < 2:5220601/140‑1 (MQ=255) ccccGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCACGTGGCCTGGGCCtt < 2:796624/140‑1 (MQ=255) ccccGGCGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCACGTGGCCTGGGCCtt < 2:919578/140‑1 (MQ=255) | GTGGGCAGCAATCTTATAGGTGATAAGCCCCTGCTTAACATCTTCTTTATTGGGCAGACCCAGATGCTCTTTTGGCGTTACGTAACAGAGCATCGCGCAGCCAAACCAGCCAATCATCGCCGCACCAATCCCCGACGTGAAGTGGTCATAGCCCGGCGCAATATCGGTAGTTAGCGGCCCCAGAGTGTAAAACGGCGCTTCGTGGCAGTGCTCTAACTCCTCGGTCATATTGCGGCGGATCATCTGCATCGGCACGTGGCCTGGGCCTTCA > NC_000913/4194534‑4194804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |