Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,494,288 C→A C40F (TGC→TTC)  idnD ← L‑idonate 5‑dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,494,2880CA99.9% 2547.8 / NA 723C40F (TGC→TTC) idnDL‑idonate 5‑dehydrogenase
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base A (335/384);  minor base G (1/0);  total (337/386)
Fisher's exact test for biased strand distribution p-value = 4.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 736 total aligned reads displayed.

CTACCGTTTGCCCTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGCAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTCCTCACTGGTC  >  NC_000913/4494151‑4494422
                                                                                                                                         |                                                                                                                                      
  aCCGTTTGCCCTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAGATTACCTAGTTTGCCTACCTGATAAAAATGAAAATCGGAACCGAAAAt                                                                                                                                    >  2:2053910/1‑140 (MQ=255)
  aCCGTTTGCCCTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAAt                                                                                                                                    >  1:7184322/1‑140 (MQ=255)
  aCCGTTTGCCCTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAAt                                                                                                                                    >  2:3970389/1‑140 (MQ=255)
  aCCGTTTGCCCTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGCAACCGAAAAt                                                                                                                                    >  1:5691377/1‑140 (MQ=255)
       ttGCCCTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCAc                                                                                                                               <  1:5230165/140‑1 (MQ=255)
        tGCCCTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACGTACTTTTCCTTCGTGAAAATAATGTAAATCGGAACCGAAAATTCCAcc                                                                                                                              >  2:2476298/1‑140 (MQ=255)
        tGCCCTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCAcc                                                                                                                              <  2:4650641/140‑1 (MQ=255)
         gCCCTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCt                                                                                                                             <  1:5350016/140‑1 (MQ=255)
         gCCCTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCt                                                                                                                             <  2:5419225/140‑1 (MQ=255)
         gCCCTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCt                                                                                                                             <  2:6943593/140‑1 (MQ=255)
         gCCCTTCATGTAATTCTGATGACTCTCTACGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCt                                                                                                                             <  1:2241581/140‑1 (MQ=255)
            cTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCgg                                                                                                                          <  2:6485654/140‑1 (MQ=255)
             ttCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCCCCTCggg                                                                                                                         <  2:7362902/140‑1 (MQ=255)
              tCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGt                                                                                                                        >  1:6378756/1‑140 (MQ=255)
              tCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGt                                                                                                                        <  1:298515/140‑1 (MQ=255)
                 tGTAATTCTGATGAGTCGCTATTAATAACTTGACCAATACCTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTAt                                                                                                                     <  2:2818574/140‑1 (MQ=255)
                 tGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTAt                                                                                                                     <  1:1546516/140‑1 (MQ=255)
                  gTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTAtt                                                                                                                    <  1:5729798/140‑1 (MQ=255)
                    aaTTCTGATGAGTCGCTCTGAAAAACTTTACTCATTACTACATGACCTCACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTg                                                                                                                  <  2:2170522/140‑1 (MQ=255)
                       tCTGATGAGTCGCTATGAATAATTTTACCGATAACCTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTAc                                                                                                               <  2:3195368/140‑1 (MQ=255)
                       tCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTAc                                                                                                               <  1:680636/140‑1 (MQ=255)
                        cTGATGAGTCGCTATTAATAACTTTACCGCTAACTTCCTGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACt                                                                                                              <  1:3606996/140‑1 (MQ=255)
                         tgatgaGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTa                                                                                                             <  1:1422281/140‑1 (MQ=255)
                          gatgaGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTaa                                                                                                            <  1:3837852/140‑1 (MQ=255)
                           atgaGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCgg                                                                                                                          <  2:7477927/125‑1 (MQ=255)
                            tgaGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATg                                                                                                          <  1:1736159/140‑1 (MQ=255)
                            tgaGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATg                                                                                                          <  2:4332533/140‑1 (MQ=255)
                               gTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTc                                                                                                       <  1:1001569/140‑1 (MQ=255)
                               gTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTc                                                                                                       <  1:1872639/140‑1 (MQ=255)
                               gTCGCTATGAATAACGTTACCGATAGCTTGATGACCTTACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTc                                                                                                       <  1:3159098/140‑1 (MQ=255)
                                tCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTAt                                                                                                                     >  1:649987/1‑125 (MQ=255)
                                tCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTcc                                                                                                      >  1:1313165/1‑140 (MQ=255)
                                tCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTcc                                                                                                      <  2:4430610/140‑1 (MQ=255)
                                tCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTc                                                                                                       <  2:1207634/139‑1 (MQ=255)
                                tCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTc                                                                                                       >  1:1207634/1‑139 (MQ=255)
                                tCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATATAAATCGGAACCAAAAATTCCACCTTGGGTCATTTGTACCAATGTTcc                                                                                                      >  2:3567106/1‑140 (MQ=255)
                                           aaCTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGTTTATTTGTACTAATGTTCCATTATTATTcc                                                                                           <  1:6092024/140‑1 (MQ=255)
                                           aaCTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTcc                                                                                           <  2:1481476/140‑1 (MQ=255)
                                              tttACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTcc                                                                                                      <  1:6183243/126‑1 (MQ=255)
                                              tttACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCatta                                                                                                  <  1:7395489/130‑1 (MQ=255)
                                              tttACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAAt                                                                                        <  1:4155260/140‑1 (MQ=255)
                                                  ccGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTAt                                                                                    >  1:454892/1‑140 (MQ=255)
                                                     aTAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGt                                                                                 <  2:5142433/140‑1 (MQ=255)
                                                     aTAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGt                                                                                 <  2:628808/140‑1 (MQ=255)
                                                       aaCTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCAGCTCGGGTTCTTTGTACGAATGTTCCATTATTATTCCAATCTATCGTCt                                                                               >  2:2968612/1‑140 (MQ=255)
                                                       aaCTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCt                                                                               <  2:7145814/140‑1 (MQ=255)
                                                       aaCTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCt                                                                               >  1:4953006/1‑140 (MQ=255)
                                                          ttCATGACCTAACACCACCGGTGCCTTTATCTTGACATTACCTACTTTCCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCt                                                                            <  2:2392763/140‑1 (MQ=255)
                                                                aCCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTaa                                                                      >  1:4403824/1‑140 (MQ=255)
                                                                    aaCACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGc                                                                  >  2:1329055/1‑140 (MQ=255)
                                                                    aaCACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGc                                                                  >  2:1822903/1‑140 (MQ=255)
                                                                           tCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAAc                                                                     >  2:491231/1‑130 (MQ=255)
                                                                           tCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGtt                                                           >  2:5529584/1‑140 (MQ=255)
                                                                           tCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGtt                                                           >  2:6835429/1‑140 (MQ=255)
                                                                           tCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGtt                                                           >  1:4088072/1‑140 (MQ=255)
                                                                           tCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGtt                                                           >  2:4748026/1‑140 (MQ=255)
                                                                            gggTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGttt                                                          >  2:5612558/2‑140 (MQ=255)
                                                                             ggTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCGGCTCGGTAACGGCAACAGtttt                                                         >  1:3656354/1‑140 (MQ=255)
                                                                                  cTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGc                                                    <  2:6144547/140‑1 (MQ=255)
                                                                                   tttATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGcc                                                   <  1:6902468/140‑1 (MQ=255)
                                                                                     tATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTc                                                        <  1:4702464/133‑1 (MQ=255)
                                                                                      aTCATGAAATTACCTCCTTTTCTTTGCTGCTAATAATATAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGc                                                <  1:2786166/140‑1 (MQ=255)
                                                                                      aTCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGc                                                <  1:926109/140‑1 (MQ=255)
                                                                                        cATGAAATTACCTACTTTTCCTTCCTGATAATATTGTAATTCGGAACCCAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGcaa                                              <  2:3656354/140‑1 (MQ=255)
                                                                                        cATGAAATTACCTACTTTTCCTCCCTGATCATAATGTTAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGcaa                                              <  1:2406266/140‑1 (MQ=255)
                                                                                         aTGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGcc                                                   >  2:5784685/1‑134 (MQ=255)
                                                                                         aTGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATACCAATCTACCGTGTGCTCGGTAACGCCAACAGTTTTCTTGcctgtctc                                             >  2:2708555/1‑134 (MQ=255)
                                                                                            aaaTTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCaacaac                                          >  1:5597047/1‑140 (MQ=255)
                                                                                             aaTTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACg                                         <  1:5415986/140‑1 (MQ=255)
                                                                                              aTTACCTACTTTTCCTTCCTTATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCaacaac                                          >  2:1674736/1‑138 (MQ=255)
                                                                                                  ccTACTTTTCCTTCCTGATAATCATCTAATTCGGAACGGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGa                                    <  1:3480051/140‑1 (MQ=255)
                                                                                                  ccTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGa                                    <  1:4321834/140‑1 (MQ=255)
                                                                                                  ccTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTAGCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGa                                    <  2:1108572/140‑1 (MQ=255)
                                                                                                  ccTACTTTACCTTCCTCCTAATTATGTAAATTGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGa                                    <  2:3387412/140‑1 (MQ=255)
                                                                                                       ttttCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGcaa                                              <  2:4973097/125‑1 (MQ=255)
                                                                                                       ttttCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACtgtg                               >  2:141305/1‑140 (MQ=255)
                                                                                                       ttttCCTTCCTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACtgtg                               >  2:4204045/1‑140 (MQ=255)
                                                                                                         ttccttccTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACg                                         <  1:5042630/128‑1 (MQ=255)
                                                                                                         ttccttccTGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGtt                             >  1:2559253/1‑140 (MQ=255)
                                                                                                             ttcctGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCa                         >  1:853864/1‑140 (MQ=255)
                                                                                                             ttcctGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTATGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCa                         <  2:5979061/140‑1 (MQ=255)
                                                                                                                 tGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTg                     >  2:6539781/1‑140 (MQ=255)
                                                                                                                 tGATAATAATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTg                     >  1:3993541/1‑140 (MQ=255)
                                                                                                                   ataataATGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCa                   >  1:5911625/1‑140 (MQ=255)
                                                                                                                    taataaTGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCAt                  <  2:5329155/140‑1 (MQ=255)
                                                                                                                          tGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTc            >  1:3944180/1‑140 (MQ=255)
                                                                                                                          tGTAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTc            >  1:6648717/1‑140 (MQ=255)
                                                                                                                            tAAATCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTCCt          >  1:479685/1‑140 (MQ=255)
                                                                                                                             aaaTCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTCCTc         <  1:7491893/140‑1 (MQ=255)
                                                                                                                             aaaTCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTCCTc         >  2:4539854/1‑140 (MQ=255)
                                                                                                                              aaTCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTCCTCa        >  2:4110261/1‑140 (MQ=255)
                                                                                                                               aTCGGAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTCCTCAc       <  1:5497715/140‑1 (MQ=255)
                                                                                                                                   gAACCGAAAATTCCATCTCGGGTTAGTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTCCTCACTGGt   <  1:2877920/140‑1 (MQ=255)
                                                                                                                                   gAACCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTCCTCACTGGt   <  2:1569059/140‑1 (MQ=255)
                                                                                                                                   gAACCGAAAATTCCACCTCGGGCTAGTTGTACTAATGCTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTCCTCACTGGt   <  1:2096622/140‑1 (MQ=255)
                                                                                                                                    aaCCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCAt                  >  2:3914201/1‑124 (MQ=255)
                                                                                                                                    aaCCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTCCTCACTGGTc  >  2:3768027/1‑140 (MQ=255)
                                                                                                                                    aaCCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTCCTCACTGGTc  >  2:839646/1‑140 (MQ=255)
                                                                                                                                    aaCCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTACACTTGCATTAATTCCTCACTGGTc  >  1:3341509/1‑140 (MQ=255)
                                                                                                                                    aaCCGAAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTCTTTCCAGTTGCATGAATTCCTCACTGGTc  >  1:2681135/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                      
CTACCGTTTGCCCTTCATGTAATTCTGATGAGTCGCTATGAATAACTTTACCGATAACTTCATGACCTAACACCATCGGTGCCTTTATCATGAAATTACCTACTTTTCCTTCCTGATAATAATGTAAATCGGAACCGCAAATTCCACCTCGGGTTATTTGTACTAATGTTCCATTATTATTCCAATCTATCGTCTGCTCGGTAACGGCAACAGTTTTCTTGCCCGCAACAACGCAGGACTGTGTTTTCACTTGCATAAATTCCTCACTGGTC  >  NC_000913/4494151‑4494422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: