Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 622,460 T→C V54A (GTG→GCG)  entS → enterobactin exporter EntS

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913622,4600TC99.4% 1748.9 / NA 480V54A (GTG→GCG) entSenterobactin exporter EntS
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base C (238/237);  minor base A (1/2);  total (240/240)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 491 total aligned reads displayed.

TAACCTCAGCCTGTTGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGTGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGACTG  >  NC_000913/622323‑622596
                                                                                                                                         |                                                                                                                                        
  aCCTCAGCCTGTTGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACAATCCACCTGGCAGGCgggg                                                                                                                                      <  2:7519674/140‑1 (MQ=255)
   ccTCAGCCTGTTGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGc                                                                                                                                     >  1:3978709/1‑140 (MQ=255)
      cAGCCTGTTGAAAACGCCCCCGCCGTTTCGCCCAGTATTTCTCGCTCGGTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCttt                                                                                                                                  <  2:2210835/140‑1 (MQ=255)
      cAGCCTGTTGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCttt                                                                                                                                  >  1:1901598/1‑140 (MQ=255)
      cAGCCTGTTGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCttt                                                                                                                                  >  1:3745100/1‑140 (MQ=255)
       aGCCTGTTGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGCTGACACATCCCACGTGGCAGGCGGGGCTTTc                                                                                                                                 >  2:3180282/1‑140 (MQ=255)
        gCCTGTTGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCg                                                                                                                                >  1:1718053/1‑140 (MQ=255)
             ttGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGAc                                                                                                                           >  2:1138279/1‑140 (MQ=255)
             ttGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGAc                                                                                                                           >  2:3044190/1‑140 (MQ=255)
             ttGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGAc                                                                                                                           >  1:4932504/1‑140 (MQ=255)
                   aCGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTCCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGAc                                                                                                                     <  1:2563623/140‑1 (MQ=255)
                      cACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACcgg                                                                                                                  >  2:936040/1‑140 (MQ=255)
                       aCCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATTATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACcggc                                                                                                                 >  1:7457827/1‑140 (MQ=255)
                       aCCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACcg                                                                                                                   >  1:4337155/1‑138 (MQ=255)
                       aCCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATCATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACcggc                                                                                                                 >  2:2721378/1‑140 (MQ=255)
                             cGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGcgcg                                                                                                           <  1:1256070/140‑1 (MQ=255)
                               tttCGCGCAGTATTCTTCGCTCGTTACATTTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGAt                                                                                                         <  1:3224473/140‑1 (MQ=255)
                               tttCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGGAGGCGGGGCTTACGATGACGCTGACCGGCGGCGCGAt                                                                                                         >  1:2671127/1‑140 (MQ=255)
                               tttCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGAt                                                                                                         <  1:6383396/140‑1 (MQ=255)
                               tttCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGAt                                                                                                         <  1:960923/140‑1 (MQ=255)
                               tttCGCGCAGTATTCCTCGCTCATTGCATTTCAATTGGGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGAt                                                                                                         <  1:2478175/140‑1 (MQ=255)
                                       aGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGCGGCTTTCAGTGACGCTCACCGCCGGCGCGATGTttgttg                                                                                                 >  2:2612170/1‑140 (MQ=255)
                                          aTTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGAAGGCGGGGCTTTTGCTAACGCTGACTGGCGGGGCGATGTTTGTTGGcc                                                                                              >  2:3357116/1‑140 (MQ=255)
                                            tCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTg                                                                                            <  2:6724723/140‑1 (MQ=255)
                                                   tcgTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTTCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTcg                                                                                     >  1:6099095/1‑140 (MQ=255)
                                                   tcgTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACTCTGACCGGCGGGGCGATGTTTGTTGGCCTGATGGTcg                                                                                     >  1:2341535/1‑140 (MQ=255)
                                                   tcgTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGt                                                                                       <  2:1639415/138‑1 (MQ=255)
                                                   tcgTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTcg                                                                                     >  2:3968130/1‑140 (MQ=255)
                                                   tcgTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTcg                                                                                     >  1:4980476/1‑140 (MQ=255)
                                                   tcgTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTcg                                                                                     >  1:1611460/1‑140 (MQ=255)
                                                   tcgTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTcg                                                                                     >  1:5857925/1‑140 (MQ=255)
                                                   tcgTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTcg                                                                                     >  1:566252/1‑140 (MQ=255)
                                                    cgTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTcgg                                                                                    <  1:5339620/140‑1 (MQ=255)
                                                     gTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGAtgtttg                                                                                                    >  2:4731060/1‑123 (MQ=255)
                                                       ttCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTcggcgg                                                                                 <  2:1909561/140‑1 (MQ=255)
                                                           tctcAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGtgtg                                                                             <  1:7053529/140‑1 (MQ=255)
                                                            ctcAATTGTGCCTCTGGCTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGGCCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGc                                                                            <  2:6376510/140‑1 (MQ=255)
                                                                aTTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGc                                                                        <  1:274231/140‑1 (MQ=255)
                                                                 ttGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGAGATGTTTGTTGACCAGATGGTTGGCGGTGTGCTGGCg                                                                       >  1:2159665/1‑140 (MQ=255)
                                                                    tgtCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGAt                                                                    >  1:4231639/1‑140 (MQ=255)
                                                                      tctcTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCg                                                                  >  2:5348537/1‑140 (MQ=255)
                                                                      tctcTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGAGGTTAGTTGGCCTGATGATCGGGGGTGTGCTGGCGGAACg                                                                  >  2:2032543/1‑140 (MQ=255)
                                                                        tctGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCt                                                                <  1:815046/140‑1 (MQ=255)
                                                                         ctGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTa                                                               >  1:1004188/1‑140 (MQ=255)
                                                                                tGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTg                                                                          >  1:1114439/1‑122 (MQ=255)
                                                                                tGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAgcgc                                                        <  2:426473/140‑1 (MQ=255)
                                                                                tGCTCGGCGTCACGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAgcgc                                                        >  2:7352044/1‑140 (MQ=255)
                                                                                 gCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCa                                                       <  2:5034991/140‑1 (MQ=255)
                                                                                  cTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCaa                                                      >  2:229944/1‑140 (MQ=255)
                                                                                      gCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCaaaaaa                                                  >  1:678177/1‑140 (MQ=255)
                                                                                      gCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCaaaaaa                                                  >  2:5513132/1‑140 (MQ=255)
                                                                                                 ccggtgcAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCAATTAGCGCACAAAAGTGATTTTGCt                                       >  1:2868982/1‑140 (MQ=255)
                                                                                                   ggtgcAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTgg                                     <  2:7184043/140‑1 (MQ=255)
                                                                                                       cAGATCCAGATGATGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAACAAGTGATTTTGCTGgcgcg                                 <  2:4363081/140‑1 (MQ=255)
                                                                                                          aTCCAGATGATGACATATTCCAGCTAGCATGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCgg                              <  1:3520745/140‑1 (MQ=255)
                                                                                                           tCCAGATGATGACACTTTCCACCTGTCAGGCGGGGCTATCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGc                             <  1:2931690/140‑1 (MQ=255)
                                                                                                               gatgatGACACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCt                         <  1:6276653/140‑1 (MQ=255)
                                                                                                                atgatgACACATTCCTCCTGGCCGGAGGGCCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCtg                        <  1:2093931/140‑1 (MQ=255)
                                                                                                                    tgaCACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCgg                              <  1:6885703/130‑1 (MQ=255)
                                                                                                                    tgaCACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGc                    >  2:6864521/1‑140 (MQ=255)
                                                                                                                    tgaCACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGc                    >  1:5942508/1‑140 (MQ=255)
                                                                                                                     gaCACATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCa                   <  2:5628502/140‑1 (MQ=255)
                                                                                                                      acacATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCAt                  >  2:4134356/1‑140 (MQ=255)
                                                                                                                      acacATTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCAt                  <  1:720088/140‑1 (MQ=255)
                                                                                                                       cacaTTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCAtt                 <  2:3822320/140‑1 (MQ=255)
                                                                                                                         caTTCCTCCTGGCAGGCGGGGCTTTCGGTGACGCTGACAGGCGGCGCGATGTTTGTGGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTgg               <  2:4928996/140‑1 (MQ=255)
                                                                                                                         caTTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTgg               <  2:1014011/140‑1 (MQ=255)
                                                                                                                         caTTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTgg               <  2:6138246/140‑1 (MQ=255)
                                                                                                                         caTTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTgg               <  1:6750790/140‑1 (MQ=255)
                                                                                                                         caTTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTgg               <  2:1749014/140‑1 (MQ=255)
                                                                                                                         caTTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTgg               <  2:183903/140‑1 (MQ=255)
                                                                                                                         caTTCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTgg               <  1:6659800/140‑1 (MQ=255)
                                                                                                                         caTTCCACCTGGCAGGCCGGGCTTTCGGTGACGCTCACCTGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTgg               <  2:2159665/140‑1 (MQ=255)
                                                                                                                         caTTCCACCTGGCAGGAGGGGCATTCGGTGTCGCTTACCGGCGGCGCGCTGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTgg               <  2:3677642/140‑1 (MQ=255)
                                                                                                                            tCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGGGCGCAAAAGAGTGATTATGCTGGCGCGCGGAACCTGTGGCATTGGCtt            >  2:2498528/1‑140 (MQ=255)
                                                                                                                            tCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTgg               >  1:5431197/1‑137 (MQ=255)
                                                                                                                            tCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCtt            >  2:822185/1‑140 (MQ=255)
                                                                                                                            tCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCtt            >  1:876322/1‑140 (MQ=255)
                                                                                                                            tCCACCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCtt            >  2:6029690/1‑140 (MQ=255)
                                                                                                                               aCCTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCAt         >  2:6433333/1‑140 (MQ=255)
                                                                                                                                ccTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCAtt        >  1:7371676/1‑140 (MQ=255)
                                                                                                                                ccTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCAtt        >  1:7117568/1‑140 (MQ=255)
                                                                                                                                ccTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCAtt        <  2:707730/140‑1 (MQ=255)
                                                                                                                                 cTGGCAGGCGGGGCTTTTGGTGACGCTGACCGGCGGCGCTGTGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTg       <  2:2868982/140‑1 (MQ=255)
                                                                                                                                 cTGGCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTgg               <  1:3842290/132‑1 (MQ=255)
                                                                                                                                   ggCAGGCGGGGCTTTTGGTGACACTCACCCGCGGCGCCATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGa     <  1:2243802/140‑1 (MQ=255)
                                                                                                                                   ggCAGGCGGGGCTTTGGGTGACGCTGACCTGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGa     <  1:3053749/140‑1 (MQ=255)
                                                                                                                                   ggCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGa     <  1:1432799/140‑1 (MQ=255)
                                                                                                                                   ggCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGa     <  2:4505610/140‑1 (MQ=255)
                                                                                                                                   ggCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGa     <  1:556941/140‑1 (MQ=255)
                                                                                                                                   ggCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGa     <  2:6240964/140‑1 (MQ=255)
                                                                                                                                    gCAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGAc    >  1:5249966/1‑140 (MQ=255)
                                                                                                                                    gCAGGCGGGGCTTTCGGTGACGATGACCGGCCGCGTGATCTTTGTTGGTCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGAc    <  2:2381437/140‑1 (MQ=255)
                                                                                                                                     cAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGACt   <  2:5857925/140‑1 (MQ=255)
                                                                                                                                     cAGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGACt   <  2:5252172/140‑1 (MQ=255)
                                                                                                                                     cAGGCGGGGCTTTCGGGGCCGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGAACGCTATGAGCGCAAAAAAGGGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGACt   >  2:1500517/1‑140 (MQ=255)
                                                                                                                                      aGGCGGGGCTTTCTGTGACGGTGACCGGCGGGGCGGAGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGAACCTGTGGCATTGGCTTCATTGGACtg  <  2:1361321/140‑1 (MQ=255)
                                                                                                                                      aGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGACtg  <  2:6788566/140‑1 (MQ=255)
                                                                                                                                      aGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGACtg  <  2:6941846/140‑1 (MQ=255)
                                                                                                                                      aGGCGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGACCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGACtg  <  1:4538187/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                        
TAACCTCAGCCTGTTGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGTGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGACTG  >  NC_000913/622323‑622596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: