| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 188,435 | C→T | L72L (CTG→CTA) | glnD ← | PII uridylyltransferase/uridylyl removing enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 188,435 | 0 | C | T | 99.4% | 1172.1 / NA | 341 | L72L (CTG→CTA) | glnD | PII uridylyltransferase/uridylyl removing enzyme |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base T (135/202); minor base A (2/0); total (138/203) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 345 total aligned reads displayed.
CCGGGAGCTTTTTACGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGTTAATTCATCACGGG > NC_000913/188299‑188571 | gggAGCTTTTTACGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAg < 1:6595291/140‑1 (MQ=255) gAGCTTTTTACGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCt < 1:1428024/140‑1 (MQ=255) gAGCTTTTTACGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCt < 2:4008089/140‑1 (MQ=255) aGCTTTTTACGGCTTAACATCACTAAATCGACGTCTGAACGTGGATGCTGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTg < 2:1939994/140‑1 (MQ=255) aGCTTTTTACGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTg < 1:5968145/140‑1 (MQ=255) aGCTTTTTACGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTg < 2:5389470/140‑1 (MQ=255) aGCTTTTTACGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTg > 2:1173011/1‑140 (MQ=255) tttACGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGa > 1:1122397/1‑140 (MQ=255) tttACGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGa > 2:103190/1‑140 (MQ=255) aCGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATaa > 1:7350409/1‑140 (MQ=255) cGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATaaa > 2:1877121/1‑140 (MQ=255) cGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTAGCTGAATCCCGCGTCACTCCATAATAGTTGAAGGAGCTGGTCGATaaa > 2:2680504/1‑140 (MQ=255) cTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTc > 2:7329136/1‑140 (MQ=255) aaaaTCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGACTCCCGCTTAAATCCATAATCGTTGTCGGAGCTGGTCGATAAACTCGGt > 2:3128545/1‑140 (MQ=255) aaaaTCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTGAATGCATGATCGTTGTAGGAGCTGGTCGATAAACTCGGt > 2:2803144/1‑140 (MQ=255) aaaaTCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGt > 2:7226785/1‑140 (MQ=255) aaaTCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTg < 2:6264016/140‑1 (MQ=255) cAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTgcgcg < 1:5136298/140‑1 (MQ=255) cAGTAAATCGACGTCTGAAAGTGGATGAAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTgcgcg < 2:5616420/140‑1 (MQ=255) aGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGGGCGGGTCGATAAACTCGGTgcgcgc > 1:3030263/1‑140 (MQ=255) gTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTg > 2:1576469/1‑134 (MQ=255) gTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGcc < 1:4305875/140‑1 (MQ=255) gTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGcc > 1:4143973/1‑140 (MQ=255) tAAATCGACGTCTGAAAGTGGATGCAGCTCGTCACGACCGTAGCCACCTACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCt < 2:3024219/140‑1 (MQ=255) tAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCt < 2:5941598/140‑1 (MQ=255) tAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCt < 2:3865283/140‑1 (MQ=255) aaTCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCtca < 2:262407/140‑1 (MQ=255) aaTCGACGTCTGAAAGCGGATGTAGCTCGCCACAAACGTGGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCtca < 2:3318938/140‑1 (MQ=255) aTCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCtcaa > 1:4027063/1‑140 (MQ=255) aCGTCTGAAAGTGGATGTAGCTCGCCACGACTGTAACCACCGACGGCGCCCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCtcaatcaa < 2:2123251/140‑1 (MQ=255) aCGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCtcaatcaa < 2:5473851/140‑1 (MQ=255) aCGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCtcaatcaa < 1:103190/140‑1 (MQ=255) aCGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCtcaatcaa < 1:837390/140‑1 (MQ=255) aCGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCtcaatcaa < 1:7188660/140‑1 (MQ=255) aCGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCtcaatcaa < 2:6609117/140‑1 (MQ=255) aCGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCtcaatcaa < 2:4840690/140‑1 (MQ=255) aCGTCTGAAAGTGGATGCAGCTCGCAACGTCCGTAGCAACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCtcaatcaa < 1:2458783/140‑1 (MQ=255) cGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCACAATCGTTGGAGGTGTTGGTCGATAACCTCGTAGCGCGCCACAATCAAc > 2:3425062/1‑140 (MQ=255) tCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGGGCTGGTCTATAAACACGGTGCGCGCCTCAATCAACTg > 1:2624649/1‑140 (MQ=255) tCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTg > 2:4646589/1‑140 (MQ=255) tCTGAAAGTCGACGCAGCTCGCCACGACCGTATCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTg < 2:4716641/140‑1 (MQ=255) tGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCTATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGtt < 2:6380636/140‑1 (MQ=255) tGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGtt < 1:7267017/140‑1 (MQ=255) tGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGtt < 2:6945879/140‑1 (MQ=255) tGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGtt < 2:1680894/140‑1 (MQ=255) aaGTGGATGCAGCTCGCCACGATCGTAGCCACCGACGCCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTg < 1:3611055/140‑1 (MQ=255) gATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCagag > 1:1647307/1‑140 (MQ=255) tGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGAt > 2:1417286/1‑140 (MQ=255) gCTCGCCACGACCGTCGCCACCGACCGCGCCCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCa < 1:2067169/140‑1 (MQ=255) gCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCa < 1:477744/140‑1 (MQ=255) gCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCa < 1:5800213/140‑1 (MQ=255) cTCGCCACGACCGTAGCCACCGGCGCCGATCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCAt < 1:3239317/140‑1 (MQ=255) gCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCa < 1:4629816/136‑1 (MQ=255) gACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAg > 1:3735357/1‑140 (MQ=255) gTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCGGCGGAGATCCCATTGTCAAAGGCAt > 1:2772311/1‑140 (MQ=255) tAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATc > 2:7506011/1‑140 (MQ=255) gCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCAc > 2:1499038/1‑140 (MQ=255) ccGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAg > 1:1726005/1‑140 (MQ=255) cGACGGCGACCAATGCCCGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGAAGCAGCTGGTCGATAAACTCGGGGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGc > 2:294248/1‑140 (MQ=255) cGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGc > 1:4866045/1‑140 (MQ=255) cGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGc > 1:1302526/1‑140 (MQ=255) cGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGc < 2:5159073/140‑1 (MQ=255) cGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGc > 1:622353/1‑140 (MQ=255) cGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGc > 2:5245489/1‑140 (MQ=255) cGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGc > 1:7509711/1‑140 (MQ=255) cGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGc < 2:5340382/140‑1 (MQ=255) gACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGCCAAAGGCATCACCCAGcc < 2:1726005/140‑1 (MQ=255) gACGGCGACCAATGCCAGGTCGCCAATCTGGGTGAGTCCCGCTTCAATACATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGcc < 2:3207449/140‑1 (MQ=255) aCGGCGACCAATGCCTGGTCGGAAATCTGTCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCa < 1:3348291/140‑1 (MQ=255) aCGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCa < 1:4670469/140‑1 (MQ=255) cGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCaa < 2:6704266/140‑1 (MQ=255) ggCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAAc > 2:4553949/1‑140 (MQ=255) gCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACg > 2:6245102/1‑140 (MQ=255) gCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACg < 2:865184/140‑1 (MQ=255) gCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACg < 1:918890/140‑1 (MQ=255) gCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACg < 2:1594/140‑1 (MQ=255) gCGACCAATGCCAGGTCCGCAATCTGGCTGAGTCCTGCTCCAATCCATTATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACg < 2:2225345/140‑1 (MQ=255) cAATGCCATGTCGGCATCCTGGCTGAATCCCACTTTAATCCATAATCGATGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGa < 2:3595689/140‑1 (MQ=255) cAATGCCAGGTCGGCAATTTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGa < 2:4166414/140‑1 (MQ=255) cAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGa < 2:4967595/140‑1 (MQ=255) ccAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTa < 2:5756473/140‑1 (MQ=255) cAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTAt < 2:4530142/140‑1 (MQ=255) ggCAATCTGGCTGAAGCCCGCTGCACTCCATAATCGTCGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCAGTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGatat < 1:3144342/140‑1 (MQ=255) gCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGa < 1:448893/127‑1 (MQ=255) gCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATg > 2:7011670/1‑140 (MQ=255) gCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTCGAAAGTATCGATATg > 1:3276088/1‑140 (MQ=255) cAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATg > 1:6907389/1‑139 (MQ=255) cTGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCtt > 2:4761090/1‑140 (MQ=255) tGGCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCttt > 1:785124/1‑140 (MQ=255) gCTGAATCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTa > 1:170762/1‑140 (MQ=255) tCCCGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCAc < 2:4395921/140‑1 (MQ=255) ccGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCg < 1:6283250/140‑1 (MQ=255) ccGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCg < 1:5446073/140‑1 (MQ=255) ccGCTTCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCg < 2:785124/140‑1 (MQ=255) tCAATCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGt < 1:5611559/140‑1 (MQ=255) aTCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGTTaa > 2:716636/1‑140 (MQ=255) aTCCATAATCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGTTaa < 1:1551033/140‑1 (MQ=255) aaTCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGTTAATtcatc > 1:5305975/1‑140 (MQ=255) aTCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGTTAATtcatca < 1:254143/140‑1 (MQ=255) aTCGTTGTAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGTTAATtcatca < 1:6695975/140‑1 (MQ=255) | CCGGGAGCTTTTTACGGCTTAAAATCAGTAAATCGACGTCTGAAAGTGGATGCAGCTCGCCACGACCGTAGCCACCGACGGCGACCAATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGTTAATTCATCACGGG > NC_000913/188299‑188571 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |