| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 970,213 | G→A | A275A (GCG→GCA) | ycaQ → | winged helix DNA‑binding domain‑containing protein YcaQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 970,213 | 0 | G | A | 99.7% | 1102.5 / NA | 325 | A275A (GCG→GCA) | ycaQ | winged helix DNA‑binding domain‑containing protein YcaQ |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (154/170); total (155/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 342 total aligned reads displayed.
TACTATCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCGCTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCAGCGCCGAAACGC > NC_000913/970076‑970348 | tACTATCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACt > 2:858829/1‑140 (MQ=255)tACTATCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACt > 2:79250/1‑140 (MQ=255) tCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCg > 1:5049916/1‑140 (MQ=255) tCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCg > 2:4552556/1‑140 (MQ=255) ggCTGAAACGTCCGGTACTGGCAGCATGGAGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGa < 1:3462245/140‑1 (MQ=255) ggCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGa < 2:6310088/140‑1 (MQ=255) gCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGaa > 1:1297386/1‑140 (MQ=255) gCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGaa > 1:7182285/1‑140 (MQ=255) gCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGaa > 1:4348029/1‑140 (MQ=255) gCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGaa > 2:6222717/1‑140 (MQ=255) gCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGaa > 1:6063716/1‑140 (MQ=255) gCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGaa > 2:6130434/1‑140 (MQ=255) gCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTCGGCTGCATGATGCTCTACTGCCGCTACTCGAACGAGCACTGGCCGGaa > 2:3245843/1‑140 (MQ=255) tGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAg < 1:7463614/140‑1 (MQ=255) cagcGTCCGGCACTGTCGGCGTTGCTCGACGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCt < 1:3098011/137‑1 (MQ=255) aaaCGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTCCTCGAGCGAGCACTGGCCGGAAAGCt < 2:289362/140‑1 (MQ=255) aaaCGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCt > 1:7063400/1‑140 (MQ=255) aCGTCCGGCACTGGCGGCGTGGTGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCa < 1:2824657/140‑1 (MQ=255) gTCCGGCACTGGCGGAGTGGCGCGACGCGGGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACt < 1:3031267/140‑1 (MQ=255) cGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCa > 2:5084509/1‑140 (MQ=255) cGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCa > 2:1806841/1‑140 (MQ=255) cGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGAAGATTTGCTGCCGCTACGTGAGCGAGGACTGGTCGGAAAGCTCACTGCa > 2:3690095/1‑140 (MQ=255) cACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGTGAGGACAGGCCGGAAAGCTCACTGCAACg > 1:2654944/1‑140 (MQ=255) cTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGca < 1:5573416/140‑1 (MQ=255) cTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGca < 2:4348029/140‑1 (MQ=255) ggcggcGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGGTGCCGCTAGTCGAGCGGGCACTGGCGGGAAAGCTCACTGCAACGcctg > 2:3098011/1‑137 (MQ=255) gcggcgTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCGCTGACCGGAAAGCGCACTGCAACGCACAg > 1:2518695/1‑140 (MQ=255) gcggcgTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAg < 1:6939038/140‑1 (MQ=255) gcggcgTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAg > 1:3167919/1‑140 (MQ=255) gcggagTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAg < 2:6988156/140‑1 (MQ=255) cggcgTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCt < 1:7296126/124‑1 (MQ=255) cggcgTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCt > 2:7296126/1‑124 (MQ=255) cgAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGGTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACttt < 2:5523826/140‑1 (MQ=255) cgAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACttt < 2:7182285/140‑1 (MQ=255) aaGCGAGGGCTGAACAGGAGCATATCATTGCCGTGTATGTTGAAAAATGGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCg < 2:2649494/140‑1 (MQ=255) gCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGcc < 2:342384/140‑1 (MQ=255) cGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCt < 1:3955838/140‑1 (MQ=255) gCTGAACAGCAGCAAATCATTGTTGTGCATGCTGACAAACTGGGCAATGTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGa < 2:2087197/140‑1 (MQ=255) gCTGAACAGCACTAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACACCGCGGTACTTTCGCCTTTTGa < 2:4735630/140‑1 (MQ=255) cTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGAt < 1:201435/140‑1 (MQ=255) tGAACAGCAGCAAATCACTGCTTTGCATGTTTAAATATTAGGCAATCTCTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATc < 2:1957230/140‑1 (MQ=255) tGAACAGCAGCAAATCAATGCTCTGCATGTTTAAAAATTGGGCAATCTGTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATc < 2:3004231/140‑1 (MQ=255) aaCAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCAGTGCAACGGACACCGAGGTACTGTCGCCTTTTGATCCt > 1:2325365/1‑140 (MQ=255) aaCAGCAGCAAATCATTACTGTCCATGTTGACAAATTGGCCAATCTTTTGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCt < 2:2290109/140‑1 (MQ=255) aCAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCtg < 1:5458762/140‑1 (MQ=255) aCAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCtg < 2:6387474/140‑1 (MQ=255) cagcaAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAGGCTCACTGAAACTCACAGCGCGGTAATTTCACCTTTTGATCCtgttgt > 2:2516176/1‑140 (MQ=255) cagcaAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCtgttgt > 2:206818/1‑140 (MQ=255) cagcaAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCtgttgt < 1:1018735/140‑1 (MQ=255) aaTCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTggg > 2:539545/1‑140 (MQ=255) ttGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGc > 1:5613224/1‑140 (MQ=255) gCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCaa < 1:5659860/140‑1 (MQ=255) gCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCaa < 1:3743058/140‑1 (MQ=255) tgCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAAcgc > 1:4612909/1‑140 (MQ=255) tgCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAAcgc > 1:6611666/1‑140 (MQ=255) tgCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACGTTCGCCTGTTGCTCTTGTTGTGTGGGATCGCAAAcgc > 1:1940921/1‑140 (MQ=255) tgCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCAAAGCGCGGTGCTTGCGCCTTTTGATCTTGTTCTCTGGGATAGCAAAcgc > 2:3569451/1‑140 (MQ=255) gCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCaa < 1:4125083/135‑1 (MQ=255) gCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAAcgcg > 2:5692863/1‑140 (MQ=255) gCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAAcgcg < 1:182328/140‑1 (MQ=255) gCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAAcgcg < 2:6611666/140‑1 (MQ=255) cATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACgcgc > 1:363369/1‑140 (MQ=255) cATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACgcgc > 1:6255693/1‑140 (MQ=255) tGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCag < 1:621478/140‑1 (MQ=255) gTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCATTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCaga > 1:355199/1‑140 (MQ=255) gTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCaga > 2:4774723/1‑140 (MQ=255) gTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCaga > 2:3778157/1‑140 (MQ=255) ttGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCagag > 1:5249841/1‑140 (MQ=255) ttGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCagag < 1:6386822/140‑1 (MQ=255) ttGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCagag < 1:6138545/140‑1 (MQ=255) tGAAAAATTGGGCAATCTTTGGCTGCATGGTGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGagc > 2:5722764/1‑140 (MQ=255) tGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGagc > 2:1085968/1‑140 (MQ=255) aaaaTTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGagcagc > 2:7404266/1‑140 (MQ=255) aTTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTAACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCttt < 1:5138628/140‑1 (MQ=255) ttGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCt < 2:3950959/140‑1 (MQ=255) ggCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTAc > 2:165612/1‑140 (MQ=255) gCATGATGATTTGCTGCTGCTAATCGAGCGATCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGc < 2:2989575/140‑1 (MQ=255) cATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCt > 2:5326491/1‑140 (MQ=255) cATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCt > 1:1122150/1‑140 (MQ=255) cATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCt > 1:5755175/1‑140 (MQ=255) cATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCt > 1:500828/1‑140 (MQ=255) cATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGAAGATTTTTGATTTTAGCTACCGGCt > 1:2359779/1‑140 (MQ=255) cATGATGATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCACAATCAGCTAGAGCAGATTTTTGATTTTAGATACCGGcg > 2:3467926/1‑139 (MQ=255) atgatgATTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTg < 2:6035642/140‑1 (MQ=255) gatgatTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGa < 1:800440/140‑1 (MQ=255) atgatTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAg < 2:5026130/140‑1 (MQ=255) atgatTTGCTGCCGCTACTCGAGCGAGCACTCGCCAGAACGCTCACTGAAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAg < 2:2359779/140‑1 (MQ=255) atcatTTGCTGCCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCAAAGCGCGGTACTGTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGAGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAg < 2:6670209/137‑1 (MQ=255) ttGCTGCCGCTACTCGGGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTTCTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCta < 2:4062401/140‑1 (MQ=255) gctgcCGCTACTCGAGCGAGCACTGGCAGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAg < 2:4471003/133‑1 (MQ=255) ctgcCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGTAGCTTTTAGATGTTGGCTACCCGCTGGAGTGCTATAc > 1:2913229/1‑140 (MQ=255) tgcCGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAGCGCGCAGATCAGATTTTTGATTTTAGCTACACGCTGGAGCGCTATAcc > 2:3620677/1‑140 (MQ=255) ccGCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCCGCTATTTGATTTTAGCTACCGGTTGGAGTGCTATAcccc > 2:3342644/1‑140 (MQ=255) gCTACTCGAGCGAGCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGTCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCAg > 2:5213178/1‑140 (MQ=255) cgagcgagCACTGGCCGGAAAGCTCTCTGTAACGCACCGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCAGCGCCGa < 1:2037428/140‑1 (MQ=255) cgagcgagCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAACCGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCAGCGCCGa < 1:7558988/140‑1 (MQ=255) cgagcgagCACTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCAGCGCCGa < 2:7540916/140‑1 (MQ=255) agcgagcaCTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCAGCGCCGaaa > 2:4865514/1‑140 (MQ=255) agcgagcaCTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCAGCGCCGaaa > 1:1782426/1‑140 (MQ=255) gcgagcaCTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCAGCGCCGAAAc < 2:5613224/140‑1 (MQ=255) | TACTATCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCGCTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCAGCGCCGAAACGC > NC_000913/970076‑970348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |