| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,168,692 | T→C | E47E (GAA→GAG) | comR ← | DNA‑binding transcriptional repressor ComR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,168,692 | 0 | T | C | 99.8% | 1569.5 / ‑5.7 | 428 | E47E (GAA→GAG) | comR | DNA‑binding transcriptional repressor ComR |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (233/193); total (235/193) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.68e-01 | |||||||||||
Only 100 of 436 total aligned reads displayed.
ACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCTTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGT > NC_000913/1168555‑1168826 | aCGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAGTTCGGCGGATAGCGTGAGCGCGTTGGCTCCGGTCGCCTc > 2:2046691/1‑140 (MQ=255) tttCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTcgacga > 1:4101673/1‑140 (MQ=255) tctTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTc > 1:4887322/1‑140 (MQ=255) tctTCACAAAACAGCTGTGCTTCATCCTTAGCGGCAACACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTc < 1:2046691/140‑1 (MQ=255) ctTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTcc > 1:313416/1‑140 (MQ=255) aaCAGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAgaga > 2:3759445/1‑140 (MQ=255) aaCAGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAgaga > 1:673285/1‑140 (MQ=255) aGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAg > 1:1832025/1‑125 (MQ=255) aGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAATAGAAGt > 1:1328771/1‑140 (MQ=255) aGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGt > 2:6443492/1‑140 (MQ=255) aGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGt < 2:5455301/140‑1 (MQ=255) aGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGt < 1:1788796/140‑1 (MQ=255) aGCTGTGCTTCATGCGTAGCGGTAACACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGt < 1:2694667/140‑1 (MQ=255) cTGTGCTTCATGCTTAGCGGCACAATGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCg < 1:2296385/140‑1 (MQ=255) tgCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCtt > 1:1691990/1‑140 (MQ=255) cTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCACGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCa > 2:4936836/1‑140 (MQ=255) tCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATa < 2:6832797/140‑1 (MQ=255) tGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAAcc > 2:612123/1‑140 (MQ=255) cTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCgt < 2:3941885/140‑1 (MQ=255) cTTAGCGGCAAAACGATCGATACAGAGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCgt < 1:3540825/140‑1 (MQ=255) ttAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCTAGAGAAGTCGCTTCATAACCgtg > 1:6975327/1‑140 (MQ=255) ttAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCgtg < 1:6501962/140‑1 (MQ=255) aGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTGCGCGAGAGAAGTCACTTCATAACCGTGtt > 1:2150613/1‑140 (MQ=255) gCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTTGACGAGGACCGCAAGAAAAGTTGCTTCATAACCGTGTTg > 2:3028250/1‑140 (MQ=255) gCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTg > 2:1218589/1‑140 (MQ=255) cGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCg > 2:752923/1‑123 (MQ=255) cGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCg < 1:752923/123‑1 (MQ=255) cGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGc > 1:660917/1‑140 (MQ=255) aCGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACa < 2:4276836/140‑1 (MQ=255) gatATAGCGGTCGAGAATGGCACGAAATAACCCCTCTTTCTTGGTAAAGTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCa < 2:2087824/140‑1 (MQ=255) gatATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCa < 2:4146009/140‑1 (MQ=255) gatATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCa < 1:3876961/140‑1 (MQ=255) gatATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCa < 2:2589620/140‑1 (MQ=255) gatATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCa < 1:6245934/140‑1 (MQ=255) aGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGcc > 2:1475292/1‑140 (MQ=255) cGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCtt > 2:6296452/1‑140 (MQ=255) cGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGAAAATTCCGCGTATAGCGTGGGCGCTGGGGCTCCGCTCGCCGCGGCGAGGACCCCAAGAGGAGCCTCTTCAGAACCGTGGGGCCAAAACAATTTCATGCCCtt > 2:2751574/1‑140 (MQ=255) gTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCATCATAACGGTGGTGGCAGAACGATTTCATGGCCTTAt > 1:1921399/1‑140 (MQ=255) tCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATc > 2:4534228/1‑140 (MQ=255) tCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATc > 2:5048536/1‑140 (MQ=255) tCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAAAGAAGTCGTTTCATAAACGTGTTGCGAGAAAAATTTCATGGCCTTATc > 2:2252925/1‑140 (MQ=255) gagaACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCTTAACCGTGTTGCCAGAACAATTTCATGGCCTTATCaa > 1:3705280/1‑140 (MQ=255) gagaACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCaa > 1:5565608/1‑140 (MQ=255) gagaACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCaa > 1:973644/1‑140 (MQ=255) gagaACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCaa > 2:369241/1‑140 (MQ=255) gagaACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCaa > 2:1843911/1‑140 (MQ=255) gagaACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCaa > 1:7173352/1‑140 (MQ=255) cGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGcgcg > 2:1312382/1‑140 (MQ=255) cGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGcgcg < 2:5927009/140‑1 (MQ=255) cACGAAATAACCCCTCTTTGTTTGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCa < 2:3423447/140‑1 (MQ=255) cACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCa > 1:5233659/1‑140 (MQ=255) aCGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCAt < 1:295062/140‑1 (MQ=255) aCGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCAt < 1:398126/140‑1 (MQ=255) gAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATcc < 2:824019/140‑1 (MQ=255) aTAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGTTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTg < 2:2923500/140‑1 (MQ=255) ccccTCTTTGTTGGTAACTTCCTCGTATAGCGTGGTCGCTTTGGCTCCTGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGa < 2:2354947/140‑1 (MQ=255) ccccTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGa > 2:7215060/1‑140 (MQ=255) ctTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACt > 2:5146315/1‑140 (MQ=255) ctTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACt > 1:6869140/1‑140 (MQ=255) ctTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACt > 1:4194207/1‑140 (MQ=255) tttGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACtt > 2:7434871/1‑140 (MQ=255) tttGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACtt > 1:1445260/1‑140 (MQ=255) tgttgGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACtttt > 2:4023479/1‑140 (MQ=255) tgGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTggg > 1:116243/1‑140 (MQ=255) tgGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTggg < 2:5129376/140‑1 (MQ=255) ggTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGggc > 2:6709762/1‑140 (MQ=255) tAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTg > 2:7291413/1‑122 (MQ=255) aaTTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGcc > 1:4337480/1‑140 (MQ=255) aaTTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGcc < 1:5056236/140‑1 (MQ=255) aaTTCCGCGTATAGCGTGGGCGCCTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGcc > 1:7358916/1‑140 (MQ=255) aTTCCGCGTATAGCGAGGGCGCATTTGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCa < 1:3346725/140‑1 (MQ=255) ttCCGCGTATAGCGGGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCGAGCGCGGAATCGCTGTCGAACGCTTTTGGGCGGCCAc > 1:2382244/1‑140 (MQ=255) ccGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACgg < 2:5303541/140‑1 (MQ=255) gcgTATAGTGTGGGCGATTTGGCTCCGGTCGCCTCCACGTGGTCCGCACGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCt < 2:3338212/140‑1 (MQ=255) gcgTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCt < 2:6540954/140‑1 (MQ=255) cgTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGggcggc < 1:4821671/132‑1 (MQ=255) cgTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCtt > 1:1229369/1‑140 (MQ=255) cgTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCtt > 2:1730160/1‑140 (MQ=255) cgTATAGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCATTATCAAGCGCGTCATCCCTGTCGAGCACTTTTGGGCGGCCACGGCtt > 2:2496000/1‑140 (MQ=255) ataGCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCttttt < 1:5406449/140‑1 (MQ=255) gCGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCtttttttt < 1:7234166/140‑1 (MQ=255) cGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTa < 1:5146315/140‑1 (MQ=255) cGTGGGCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTa > 1:2891424/1‑140 (MQ=255) ggCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTAcaca > 1:1008049/1‑140 (MQ=255) ggCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTAcaca < 1:4534228/140‑1 (MQ=255) ggCGCTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACCTTTGGGCGGCCACGGCTTTTTTTTAcaca > 1:6409545/1‑140 (MQ=255) gcgcTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACAt > 2:5647564/1‑140 (MQ=255) gcgcTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACAt > 2:440901/1‑140 (MQ=255) cgcTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCGCGGCTTTTTTTTACACAtt > 2:6957460/1‑140 (MQ=255) cgcTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTAcaca > 1:1406559/1‑138 (MQ=255) cgcTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTAcaca < 2:1406559/138‑1 (MQ=255) cTTTGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCCTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGTACACTTTTGGGCGGCCACGGCTTTTTTTTACACATtgt > 1:5822216/1‑140 (MQ=255) ttGGCTCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTgtgt > 2:6804902/1‑140 (MQ=255) tCCGGTCGCCTCGACGAGGTCCGCACGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGt < 1:2554324/140‑1 (MQ=255) tCCGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGt > 2:4806279/1‑140 (MQ=255) cGGTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCa < 1:5982960/140‑1 (MQ=255) ggTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAg > 1:796176/1‑140 (MQ=255) gTCGCCTCGACGAGGTTCGCAAGAGAAGTCGATTCCTAATCGTGTTGCGAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGt < 2:3559452/140‑1 (MQ=255) gTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGt < 1:5724397/140‑1 (MQ=255) gTCGCCTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGt > 2:1063311/1‑140 (MQ=255) | ACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAAACGATCGATATAGCGGTCGAGAACGGCACGAAATAACCCCTCTTTGTTGGTAAATTCCGCGTATAGCGTGGGCGCTTTGGCTCCGGTCGCTTCGACGAGGTCCGCAAGAGAAGTCGCTTCATAACCGTGTTGCCAGAACAATTTCATGGCCTTATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGT > NC_000913/1168555‑1168826 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |