| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,543,638 | T→C | A141A (GCA→GCG) | narU ← | nitrate/nitrite transporter NarU |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,543,638 | 0 | T | C | 99.6% | 1699.8 / NA | 469 | A141A (GCA→GCG) | narU | nitrate/nitrite transporter NarU |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base C (242/224); minor base G (1/1); total (244/225) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 480 total aligned reads displayed.
ATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAA > NC_000913/1543501‑1543772 | gACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCaa > 1:6895249/1‑140 (MQ=255) gACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCaa < 1:6405839/140‑1 (MQ=255) ccAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCaaaa < 1:35339/140‑1 (MQ=255) cGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGc < 2:7183567/140‑1 (MQ=255) cGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGc > 2:506303/1‑140 (MQ=255) aaCCAGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCa < 2:1170397/140‑1 (MQ=255) aGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCaaaa > 1:735532/1‑126 (MQ=255) aGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGc > 1:6958294/1‑140 (MQ=255) aGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCCAAGCAAAGTTTCCACCCGCAAAACCGCATAGCAAAGc > 1:2878743/1‑140 (MQ=255) tGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGcgat < 1:1563461/140‑1 (MQ=255) tGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGcgat > 2:5927473/1‑140 (MQ=255) tGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGcgat < 1:4968935/140‑1 (MQ=255) acacttacacCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGcgataacgat < 2:7301918/140‑1 (MQ=255) ttacacCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAat < 2:7041784/140‑1 (MQ=255) acacCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCAGCCGCAAAGCCGGATTGCAAAGCGATAACGATAAatat > 1:2188795/1‑140 (MQ=255) acacCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAatat > 2:809111/1‑140 (MQ=255) acacCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAatat > 1:4820557/1‑140 (MQ=255) acacCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAatat > 2:101062/1‑140 (MQ=255) acacCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAatat > 1:5681990/1‑140 (MQ=255) acacCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAatat > 1:6553980/1‑140 (MQ=255) acacCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAatat > 2:6925572/1‑140 (MQ=255) acacCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTACCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAatat > 2:2968848/1‑140 (MQ=255) acCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATcc > 2:4505380/1‑140 (MQ=255) acCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATcc > 2:4460584/1‑140 (MQ=255) tAAGTTTCCTAATCCTCCATTACTCTCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCaa < 1:3648754/140‑1 (MQ=255) aaGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCaaa < 1:4530003/140‑1 (MQ=255) aaGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCaaa > 2:5362860/1‑140 (MQ=255) aGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCaaaa > 1:6179833/1‑140 (MQ=255) aGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTGTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTTCACCCGCAAAACCGCATAGCAAAGCGATAATGATAAATATCCCaaaa > 2:4761680/1‑140 (MQ=255) gTTTCCTAATCCGCCCTTAATCCCAAGAGAGCTCCCTAGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAg < 1:3457815/140‑1 (MQ=255) gTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAATCCGCATAACAAGGCCATAACGCTAAATATCCCAAAAg > 1:2277107/1‑140 (MQ=255) gTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAg < 1:4407568/140‑1 (MQ=255) gTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAg > 2:4156219/1‑140 (MQ=255) gTTTCCTAATCCGCCATAAATCGCAAGAGCGCTCCCTTGTTTGGCTTTAGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAg < 2:2277107/140‑1 (MQ=255) tttCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAgg < 1:5751735/140‑1 (MQ=255) ccTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGt > 1:1737508/1‑140 (MQ=255) cTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTa > 2:271468/1‑140 (MQ=255) cGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGa > 1:39336/1‑140 (MQ=255) cATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGAttt > 2:5198895/1‑140 (MQ=255) aaTCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCa < 2:1624657/140‑1 (MQ=255) cccAAGAGCGCTCCCCTGTTTGGCTGTTGTAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACgg < 1:2369215/140‑1 (MQ=255) ccAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGc < 1:5927473/140‑1 (MQ=255) aaGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCaa > 2:835249/1‑140 (MQ=255) gcgcTCCCTTGTTTGTCTTTTGGAACGAATAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTcc < 1:3301802/140‑1 (MQ=255) cgcTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGc < 1:1471338/133‑1 (MQ=255) cgcTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGc > 2:1471338/1‑133 (MQ=255) cTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGc > 2:3946244/1‑126 (MQ=255) cTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAg > 1:6069945/1‑140 (MQ=255) cTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAg > 1:713865/1‑140 (MQ=255) cTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAg > 2:5550290/1‑140 (MQ=255) cTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAg > 2:4918865/1‑140 (MQ=255) tCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGc > 1:1349763/1‑140 (MQ=255) tCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGc < 1:3989794/140‑1 (MQ=255) tttGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGc < 1:6589438/140‑1 (MQ=255) tttGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGc < 1:1098711/140‑1 (MQ=255) tttGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGc > 1:825824/1‑140 (MQ=255) ttGGCTTTTGGAAAGTAGAAACCGACATTCCCCATGCCCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCa < 1:3149016/140‑1 (MQ=255) ttGGCTTTTGGAAAGAAGAAACCGATATTGCACATTCTCCAAGCAAAGGTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCa < 2:2086601/140‑1 (MQ=255) ttGGCTTTTGGAAAGAACAAACCGATATTGCCCATCCTCCAAGCAAAGCTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCa < 2:2344908/140‑1 (MQ=255) ggCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAg < 2:5457424/140‑1 (MQ=255) ggCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAg < 2:4362526/140‑1 (MQ=255) cTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGa > 1:5283558/1‑140 (MQ=255) cTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGa > 1:6990399/1‑140 (MQ=255) cTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGa > 2:5710050/1‑140 (MQ=255) cTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGa < 2:625418/140‑1 (MQ=255) cTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGa < 2:6007882/140‑1 (MQ=255) ttGGAAAGAAGAAACTTTTATTACCCATGCTCGAATCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGaata < 2:3571922/140‑1 (MQ=255) ggAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGaataat < 1:5492414/140‑1 (MQ=255) gaaACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTg < 1:4762540/140‑1 (MQ=255) gaaACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTg < 2:6632990/140‑1 (MQ=255) gaaACTGATATTGCCCATGCTCCAAGCAAAGGTTGCACCCGCAAAACCTCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTg < 2:2644948/140‑1 (MQ=255) gaaACTGATATTGCCCATGCTCAAAGCAAAGATTGTACCGGCAAAACCACATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTg < 2:3191237/140‑1 (MQ=255) aaCTGATATTGCCCATGCTCGAAGCTAAGCTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCa < 1:2714373/140‑1 (MQ=255) aaCTGATATTGCCCATGCTCGAAGCAAAGTTTGCATCCGGAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCa < 2:3397294/140‑1 (MQ=255) aaCTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCa < 2:4007510/140‑1 (MQ=255) aaCTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCa < 1:3794550/140‑1 (MQ=255) aaCTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCa < 2:1349763/140‑1 (MQ=255) atatTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACt < 2:3780175/140‑1 (MQ=255) atatTGCCCATGCTCCAAGCAATGTCTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACt < 1:2593790/140‑1 (MQ=255) tatTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTa > 1:669525/1‑140 (MQ=255) tatTGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTa > 1:4129076/1‑140 (MQ=255) tGCCCATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCa < 2:178281/131‑1 (MQ=255) gCCCATGCTCGAAGCAAAGTTTCCAGCCGTAAAACCGTATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTaaaaa < 1:2438916/140‑1 (MQ=255) cccATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAAc > 1:1001243/1‑140 (MQ=255) ccATGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCa < 2:6559277/128‑1 (MQ=255) tGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTc < 2:6144908/140‑1 (MQ=255) tGCTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTc > 2:7537185/1‑140 (MQ=255) cTCGAAGCAAAGTTTGCCCCCGAAAAACCGCTTAGAAAATCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCa < 2:2435901/140‑1 (MQ=255) cTCGAAGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCa < 1:3040202/140‑1 (MQ=255) aGCAAAGTTTGCACCCGCAAAATCGCATAGCAAAGCGATTACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGc < 2:3098501/140‑1 (MQ=255) aGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGc > 1:1897768/1‑140 (MQ=255) aGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGc > 1:1640028/1‑140 (MQ=255) aGCAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGc > 1:4055433/1‑140 (MQ=255) cAAAGTTTTCACCCGCCGAACCACATAGCAAAGGGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGt < 2:3464818/140‑1 (MQ=255) cAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGt < 2:6464268/140‑1 (MQ=255) cAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGt < 1:4197689/140‑1 (MQ=255) cAAAGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGt < 2:6829727/140‑1 (MQ=255) aaGTTTGCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTcc < 2:1679793/140‑1 (MQ=255) gTTTGCACCCGCAAAACCGCATCGCAAAGCGATAACGATTAATATCCCAAAAGGAGTATTCGGATTTTGCACCGCCATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAATCCGTCCATCGGCGTCCAc < 2:2473165/140‑1 (MQ=255) gCACCCGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGTTTGCAGTCCTAAAAGCCGTCCGTCGGCGTCCACCGaa > 1:2024300/1‑140 (MQ=255) | ATGACCAGCGGTGCAACCAGCTGCATTACACTTACACCTAAGTTTCCTAATCCGCCATTAATCCCAAGAGCGCTCCCTTGTTTGGCTTTTGGAAAGAAGAAACTGATATTGCCCATGCTCGAAGCAAAGTTTGCACCTGCAAAACCGCATAGCAAAGCGATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAA > NC_000913/1543501‑1543772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |