Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,564,014 C→T G574S (GGC→AGC)  dosP ← oxygen‑sensing c‑di‑GMP phosphodiesterase DosP

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,564,0140CT100.0% 1047.4 / NA 297G574S (GGC→AGC) dosPoxygen‑sensing c‑di‑GMP phosphodiesterase DosP
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (169/128);  total (169/128)

Only 100 of 303 total aligned reads displayed.

AACTGACGGCAAGCTTCCGCGATGACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCCGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTACCATTTCGTTCATCGCCGGGCTGAAGA  >  NC_000913/1563878‑1564148
                                                                                                                                        |                                                                                                                                      
aaCTGACGGCAAGCTTCCGCGATGACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTa                                                                                                                                     <  1:5703558/140‑1 (MQ=255)
 aCTGACGGCAAGCTTCCGCGATGACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGGAGGGGATGGTGCCAGCGAGCAGGGGCTTCGATGCTGTAc                                                                                                                                    >  2:2215938/1‑140 (MQ=255)
 aCTGACGGCAAGCTTCCGCGATGACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGGAGGGGATGGTGCCAGCGAGCAAGGGCTTCGATGCTGTAc                                                                                                                                    >  2:2750555/1‑140 (MQ=255)
 aCTGACGGCAAGCTTCCGCGATGACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTAc                                                                                                                                    >  1:7515086/1‑140 (MQ=255)
   tGACGGCAAGCTTCCGCGATGACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATTACCATGCAGGGGATCGGGCCAGCGAGCAAGGGCTTCGATGCTGTACAg                                                                                                                                  >  2:2168574/1‑140 (MQ=255)
     aCGGCAAGCTTCCGCGATGACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATTGCGTCAGCGAGCGAGGGACTCGATGCTGTACAGtt                                                                                                                                >  2:3686548/1‑140 (MQ=255)
         cAAGCTTCCGCGATGACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCAcc                                                                                                                            <  1:7318413/140‑1 (MQ=255)
           aGCTTCCGCGATGACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGTCAGCGAGCAAGGGCCTCGATGCTGTACAGTTCACCCg                                                                                                                          >  1:2840414/1‑140 (MQ=255)
            gCTTCCGCGATGACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGt                                                                                                                         <  1:5454335/140‑1 (MQ=255)
                   cgATGACCCAGCGCCCCGTATTTTCGATTTCCCCAATCTCTTCTGCGAAAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCg                                                                                                                  <  2:3515853/140‑1 (MQ=255)
                      tGACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAg                                                                                                               >  1:6276156/1‑140 (MQ=255)
                       gACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGa                                                                                                              >  1:170433/1‑140 (MQ=255)
                             gcgcCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTgtg                                                                                                        <  2:414026/140‑3 (MQ=255)
                             gcgcCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCg                                                                                                        <  1:496113/140‑1 (MQ=255)
                             gcgcCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCg                                                                                                        <  1:4311309/140‑1 (MQ=255)
                             gcgcCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCg                                                                                                        <  1:5212636/140‑1 (MQ=255)
                             gcgcCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCg                                                                                                        <  2:7297552/140‑1 (MQ=255)
                             gcgcCCAATATTTTCGAATTCATCAATCTCTTCTGTGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCg                                                                                                        <  2:2345421/140‑1 (MQ=255)
                              cgcCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGGTGCTGTAGAGTACAACCGTTTGTGCGAAGATTTGCgg                                                                                                       >  1:2504928/1‑140 (MQ=255)
                                   aaTATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGt                                                                                                  >  1:6973436/1‑140 (MQ=255)
                                      atTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTaaa                                                                                               <  2:6541920/140‑1 (MQ=255)
                                      atTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTaaa                                                                                               <  2:1659153/140‑1 (MQ=255)
                                        tttCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAATTCACCCGTTTGTGAGAAGATGTGCGGCTGGTAAAcc                                                                                             >  1:2345421/1‑140 (MQ=255)
                                          tCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAg                                                                                           >  1:5570717/1‑140 (MQ=255)
                                           cGATTTCACCAATCTTTTCTGCCAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGt                                                                                          <  1:3648937/140‑1 (MQ=255)
                                             aTTTCGCCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACAAGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCAAACGTTTCTGCGAAAATTTGCCGCTGTTAAACCAGttt                                                                                        <  2:1198432/140‑1 (MQ=255)
                                             aTTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGttt                                                                                        <  2:6676817/140‑1 (MQ=255)
                                               ttCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCAGCCGGTTCTGCGAAGATCTGCGCCTGGTAAACCAGTTTCa                                                                                      >  2:2538608/1‑140 (MQ=255)
                                               ttCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCa                                                                                      >  2:1776927/1‑140 (MQ=255)
                                               ttCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCa                                                                                      >  2:1300656/1‑140 (MQ=255)
                                                tCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAg                                                                                     <  1:5862950/140‑1 (MQ=255)
                                                tCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAg                                                                                     <  1:1308698/140‑1 (MQ=255)
                                                 cACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCTAGGGCTTCGATGCTGTAGAGTTCACCAGTTGCTGGGAAGATTTGCGGCGGGTAAACCAGTTTCAGt                                                                                    >  2:2055502/1‑140 (MQ=255)
                                                 cACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGt                                                                                    <  1:1805620/140‑1 (MQ=255)
                                                 cACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGGTTCTGCGCAGACTTGCGGCTGGTAAACCAGTTTCAGt                                                                                    >  1:2075021/1‑140 (MQ=255)
                                                 cACCAATCGCTTCTGCATGAGGTATAAACCGTGAATGGGTCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGt                                                                                    <  2:3384408/140‑1 (MQ=255)
                                                      aTCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGtt                                                                               <  1:6846828/140‑1 (MQ=255)
                                                          cttctGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTg                                                                           <  2:4911031/140‑1 (MQ=255)
                                                          cttctGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTg                                                                           >  1:870221/1‑140 (MQ=255)
                                                          cctctGCGAGAGGAATAAACCGGGAAGGGGGGATAGGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTg                                                                           <  2:3259133/138‑1 (MQ=255)
                                                           ttctGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGc                                                                          >  1:1181861/1‑140 (MQ=255)
                                                           ttctGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCATTTCTGCGAAGAGTTGCGGCTGGTAAACCAATTTCAGTTGGTTATTGc                                                                          >  2:2646350/1‑140 (MQ=255)
                                                            tctGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAATCCAGTTACAGTTGGTTATTGCt                                                                         >  1:3474112/1‑140 (MQ=255)
                                                            tctGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCt                                                                         >  2:229262/1‑140 (MQ=255)
                                                              tGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTaa                                                                       <  1:3943068/140‑1 (MQ=255)
                                                              tGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTaa                                                                       <  1:4138498/140‑1 (MQ=255)
                                                              tGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATATGCGGCTGGTAGACCAGTTTCCGTTGGTTATTGCTaa                                                                       >  1:2942510/1‑140 (MQ=255)
                                                                cGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATc                                                                     >  2:7380958/1‑140 (MQ=255)
                                                                cGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATGTGCGGCTAGTAAACCATTTTCCGTTGGTTATTGCTAATc                                                                     >  2:2918518/1‑140 (MQ=255)
                                                                 gagaGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCg                                                                    >  1:5178259/1‑140 (MQ=255)
                                                                  agagGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGc                                                                   >  2:365523/1‑140 (MQ=255)
                                                                   gagGAATAAACCGTGAAGGGGGTACCTGACCATGCAGTGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGct                                                                  <  1:3686548/140‑1 (MQ=255)
                                                                   gagGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGct                                                                  <  2:170433/140‑1 (MQ=255)
                                                                    agGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGctt                                                                 >  2:4093078/1‑140 (MQ=255)
                                                                     ggAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGcttc                                                                >  1:4635314/1‑140 (MQ=255)
                                                                     ggAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGcttc                                                                >  2:5398368/1‑140 (MQ=255)
                                                                        aTAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCttt                                                             >  1:1031304/1‑140 (MQ=255)
                                                                             ccGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAgcg                                                        <  2:5771802/140‑1 (MQ=255)
                                                                               gTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCt                                                      <  1:4353539/140‑1 (MQ=255)
                                                                                tGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTg                                                     >  2:5924444/1‑140 (MQ=255)
                                                                                 gAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTAACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTgc                                                    >  2:6207030/1‑140 (MQ=255)
                                                                                 gAAGGGGGCACATGACCATGCAGCGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTgc                                                    >  2:7553692/1‑140 (MQ=255)
                                                                                  aaGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGCTATCGCTAATCGCGTCTTTCAGCGCTgcg                                                   >  1:3179909/1‑140 (MQ=255)
                                                                                      gggCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCCCTTCTTTCAGCGCTCCGCCTa                                               >  1:5042856/1‑140 (MQ=255)
                                                                                        gCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTaaa                                             >  2:4632404/1‑140 (MQ=255)
                                                                                          acaTGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAAc                                           >  1:4264688/1‑140 (MQ=255)
                                                                                              gACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCaaa                                       <  2:5555553/140‑1 (MQ=255)
                                                                                               aCCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTTCTAATCGTTTCTTTAAGCGCTGCGCCTAAAACCAAAc                                      >  1:3326135/1‑140 (MQ=255)
                                                                                               aCCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAAc                                      <  2:6046033/140‑1 (MQ=255)
                                                                                               aCCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAAc                                      <  2:4385257/140‑1 (MQ=255)
                                                                                               aCCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCACTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAAc                                      <  2:4739920/140‑1 (MQ=255)
                                                                                               aCCATGCAGGGGATCCTGCCAGAGACCAATGGCTTCGCTGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAAc                                      <  1:2215938/140‑1 (MQ=255)
                                                                                                ccATGCTGGGGATCATGCCAGCGAGCAAGGGCTTCGATGCTGTGCAGTTCTCCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGGCTAATGCCAAACg                                     <  2:7258642/140‑1 (MQ=255)
                                                                                                ccATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACg                                     <  2:6401049/140‑1 (MQ=255)
                                                                                                ccATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACg                                     <  2:529733/140‑1 (MQ=255)
                                                                                                ccATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACg                                     <  2:845975/140‑1 (MQ=255)
                                                                                                ccATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACg                                     <  1:4651098/140‑1 (MQ=255)
                                                                                                 cATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCaaa                                       >  2:7031383/1‑137 (MQ=255)
                                                                                                 cATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGc                                    >  2:4306982/1‑140 (MQ=255)
                                                                                                 cATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGc                                    >  1:6412092/1‑140 (MQ=255)
                                                                                                   tGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCATTCCGCGCTGCGCCTAAAACCAAACGctc                                  >  1:2980555/1‑140 (MQ=255)
                                                                                                   tGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTGCTTTCAGCTCTGCGCCTAAAACCAAACGctc                                  >  2:3168044/1‑140 (MQ=255)
                                                                                                        gggATCGTGCCAGCGAGCAAGGGCTTCGATGGTGTACAGCTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTa                             <  2:2969232/140‑1 (MQ=255)
                                                                                                        gggATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAAc                                      >  2:449996/1‑131 (MQ=255)
                                                                                                        gggATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAAc                                      <  1:449996/131‑1 (MQ=255)
                                                                                                        gggATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTa                             <  1:6649101/140‑1 (MQ=255)
                                                                                                        gggATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTa                             <  1:4776914/140‑1 (MQ=255)
                                                                                                          gATCGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTAcc                           >  1:5542168/1‑140 (MQ=255)
                                                                                                           aTCGTGCCAGCGAGCAGGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCCCCTAAAACCAAACGCTCTTTTACCa                          >  1:2584985/1‑140 (MQ=255)
                                                                                                             cGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTACCAtt                        >  2:4946823/1‑140 (MQ=255)
                                                                                                             cGTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCACCTAAAACCAAACGCTCTTTTACCAtt                        >  1:6546856/1‑140 (MQ=255)
                                                                                                              gTGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTACCAttt                       >  2:256147/1‑140 (MQ=255)
                                                                                                               tGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCTCCTGAAGCCAAACGCTCTTTTACCATTTc                      >  1:1968869/1‑140 (MQ=255)
                                                                                                               tGCCAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTACCATTTc                      >  1:1449922/1‑140 (MQ=255)
                                                                                                                  cAGCGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGGTTCTTTCAGCGCTGCGTCTAAAACCAAACGTTCTTTTACCATTTCGtt                   >  2:3120600/1‑140 (MQ=255)
                                                                                                                     cGAGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTACCATTTCGTTCAt                >  2:4816627/1‑140 (MQ=255)
                                                                                                                       aGCAAGGGCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTACCATTTCGTTCATCg              <  2:1449922/140‑1 (MQ=255)
                                                                                                                            gcgCTTCGATGCTGTACAGTTCACCCCTTTCTGTTAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTACCATGTCGTTCATCggtggg         <  2:1898280/138‑6 (MQ=255)
                                                                                                                              gCTTCGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTACCATTTCGTTCATCGCCGGGCt       <  1:7147918/140‑1 (MQ=255)
                                                                                                                                  cGATGCTGTACAGTTCACCCGTTTCTGCGAAGATTTGAGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTACCATTTCGTTCATCGCCGGGCTgaag   <  1:3295832/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                      
AACTGACGGCAAGCTTCCGCGATGACCCAGCGCCCAATATTTTCGATTTCACCAATCTCTTCTGCGAGAGGAATAAACCGTGAAGGGGGCACATGACCATGCAGGGGATCGTGCCAGCGAGCAAGGGCTTCGATGCCGTACAGTTCACCCGTTTCTGCGAAGATTTGCGGCTGGTAAACCAGTTTCAGTTGGTTATTGCTAATCGCTTCTTTCAGCGCTGCGCCTAAAACCAAACGCTCTTTTACCATTTCGTTCATCGCCGGGCTGAAGA  >  NC_000913/1563878‑1564148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑