BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	224,908	G→A	noncoding (1138/1542 nt)	rrsH →	16S ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	224,908	0	G	A	99.1%	853.9 / NA	344	noncoding (1138/1542 nt)	rrsH	16S ribosomal RNA
Reads supporting (aligned to +/- strand): ref base G (1/1); major base A (151/188); minor base T (1/2); total (153/191)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 362 total aligned reads displayed.

CAGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATACAAAGAGAAG  >  NC_000913/224771‑225028

caGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTccagc                                                                                                                        >  2:6152030/1‑140 (MQ=255)

   aaCTTTCCAGAGATGTATTGGTACCCTCGTGAACTGTAAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTccagccgg                                                                                                                     <  1:3091778/140‑1 (MQ=17)

   aaCTTTCCAGAGATGGATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTccagccgg                                                                                                                     <  2:5180808/140‑1 (MQ=255)

       ttCCAGAGATGGATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAAc                                                                                                                 <  1:4915140/140‑1 (MQ=255)

        tCCAGAGATGGATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAAc                                                                                                                 <  2:5098446/139‑1 (MQ=255)

        tCCAGAGATGGATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGAAACACTTATCTTTTGTTGCCAACGGTCCAGCCGGGAACt                                                                                                                >  2:3246289/1‑140 (MQ=255)

        tCCAGAGATGGATTGGTGCCTTCGGGAACTGTGAGACAGGCGCTGCATGGCTGTCGACAGCTCGTGTTGTGAAATGTTGGGTTAAGGCCCGGAACGAGCGCAACTCTTATCTTTTGTTGCCAACGGTCCAGCCGGGAAcc                                                                                                                >  2:3139693/1‑139 (MQ=14)

          cAGAGATGGATTGGTGCCTTCGGGGACTGTGAGACAGGTGCTGCATGGCTGACGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCa                                                                                                              <  2:3806941/140‑1 (MQ=255)

           agagATGGATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCTTTATCTTATGTTGCTAGCGGTCCAGCCGGGAACTCaa                                                                                                             >  1:2726031/1‑140 (MQ=255)

             agaTGGATTGGTGCCTTCGGGAACTGTGATACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTGATCTTTTGTTGGCAGCGGTCCTGCCGGGAACTCAAAg                                                                                                           >  1:2137310/1‑140 (MQ=255)

             agaTGGATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAg                                                                                                           >  1:7225327/1‑140 (MQ=255)

                tGGATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGgag                                                                                                        <  1:7329685/140‑1 (MQ=255)

                  gATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTATTGTTGCCAGCGGTCCAGCCGAGAACTCAAAGGAGAc                                                                                                      >  1:3618361/1‑140 (MQ=255)

                      ggTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGcc                                                                                                  <  1:6457504/140‑1 (MQ=37)

                      ggTGCCTTCGGGAACTGGGAGACAGGTGCTGGATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGcc                                                                                                  <  2:2657965/140‑1 (MQ=255)

                       gTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACt                                                                                                     <  1:4801823/136‑1 (MQ=25)

                       gTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACt                                                                                                     >  2:4801823/1‑136 (MQ=25)

                         gCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGt                                                                                               >  1:5416521/1‑140 (MQ=25)

                          ccTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAg                                                                                                <  2:1074201/138‑1 (MQ=21)

                          ccTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTg                                                                                              >  1:3905849/1‑140 (MQ=25)

                          ccTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTg                                                                                              >  2:5355958/1‑140 (MQ=25)

                          ccTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTg                                                                                              <  1:6264542/140‑1 (MQ=21)

                            ttCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGAt                                                                                            >  2:4989454/1‑140 (MQ=25)

                             tagggAACTGTGAGACAGGTGCTGCATGGTTGTCGTCGGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAGCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATa                                                                                           <  1:3139693/138‑1 (MQ=11)

                              cGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATaa                                                                                          <  1:868563/140‑1 (MQ=21)

                               gggAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATaaa                                                                                         <  2:6749715/140‑1 (MQ=21)

                                  aaCTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTg                                                                                      <  1:5597948/140‑1 (MQ=21)

                                     tgtgAGACAGGTGCTGCGTGGCCGTCGTCAGCTCGGGTTATGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTggag                                                                                   <  2:3107016/140‑1 (MQ=11)

                                      gtgAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATaaa                                                                                         >  2:1573994/1‑133 (MQ=17)

                                      gtgAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTggagg                                                                                  <  1:1893646/140‑1 (MQ=17)

                                       tgAGACAGGTGCTGCTTGGCTGGCGACAGGTCGTGTTATGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTggagga                                                                                 <  1:2920164/140‑1 (MQ=11)

                                       tgAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTggagga                                                                                 >  2:5941131/1‑140 (MQ=17)

                                         agaCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGAAACTCAAAGGAAACAGCCAGTTATAAACTGGAGGAAg                                                                               >  1:2324728/1‑140 (MQ=11)

                                              ggTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTggg                                                                          >  1:890214/1‑140 (MQ=17)

                                               gTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCATCCGGGAACTCAAGGGACACTGCCAGTGATAAACTGGAGGAAGGTgggg                                                                         >  2:2577507/1‑140 (MQ=255)

                                               gTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTggag                                                                                   >  2:6884395/1‑130 (MQ=17)

                                               gTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTggag                                                                                   <  1:6884395/130‑1 (MQ=17)

                                               gTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAg                                                                               >  2:7481417/1‑134 (MQ=17)

                                               gTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTgggg                                                                         >  1:237169/1‑140 (MQ=17)

                                               gTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTgggg                                                                         <  2:7511484/140‑1 (MQ=17)

                                               gTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTgggg                                                                         <  1:156995/140‑1 (MQ=17)

                                                 gctgcATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGAt                                                                       >  1:4334643/1‑140 (MQ=17)

                                                 gctgcATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGAt                                                                       >  1:6044956/1‑140 (MQ=17)

                                                 gctgcATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGAt                                                                       <  2:6110154/140‑1 (MQ=17)

                                                 gctgcATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGAt                                                                       >  2:4455671/1‑140 (MQ=17)

                                                    gcATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGAc                                                                    <  1:4979574/140‑1 (MQ=17)

                                                    gcATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACCGGAGGAAGGTGAGGATGAc                                                                    <  2:4383827/140‑1 (MQ=12)

                                                     cATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACg                                                                   <  1:4212936/140‑1 (MQ=17)

                                                        ggCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCa                                                                >  2:5466129/1‑140 (MQ=17)

                                                         gCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGaa                                                                                >  1:1114788/1‑123 (MQ=17)

                                                         gCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCaa                                                               >  1:1033774/1‑140 (MQ=17)

                                                          cTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAg                                                              <  2:4233226/140‑1 (MQ=17)

                                                          cTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAg                                                              <  1:5492745/140‑1 (MQ=17)

                                                          cTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGCGATAAACTGGAGGAAGGTGGGGATGACGTCAAg                                                              >  1:3762703/1‑140 (MQ=17)

                                                           tGTCGTCAGCTCGTGTTATGAAGTGTTGGGTTAAGGCCCTCAACGAGCTCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGt                                                             <  2:2643104/140‑1 (MQ=11)

                                                               gtcAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGtcatc                                                         >  2:4079148/1‑140 (MQ=17)

                                                                   gCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATgg                                                     <  1:227553/140‑1 (MQ=17)

                                                                    cTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGGGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGc                                                    >  2:1750093/1‑140 (MQ=17)

                                                                       gtgtTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCt                                                 >  2:1883251/1‑140 (MQ=17)

                                                                        tgttgtGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCTCtt                                                >  2:5513162/1‑140 (MQ=17)

                                                                        tgttgtGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCtt                                                <  1:5133485/140‑1 (MQ=17)

                                                                         gttgtGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGACGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTa                                               >  2:1652880/1‑140 (MQ=17)

                                                                             tgAAATGTTGGGTTAAGTCCCGCAAGGAGCGCAACCCGTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAc                                           <  1:3246289/140‑1 (MQ=12)

                                                                             tgAAATGTTGGGTTAAGGCCCGCAACGAGCGTAACTCTTCTCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAc                                           <  2:2137310/140‑1 (MQ=11)

                                                                             tgAAATGTTGGGTTAAGCCCCGCAACGAGCGGATCTCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAc                                           <  2:3363278/140‑1 (MQ=11)

                                                                             tgAAATGTGGGGTTAATCCCCGCAACGAGCTTAGCGCTTGTCTTTTGTGGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAc                                           <  2:3675865/140‑1 (MQ=11)

                                                                              gAAATGTTGGGTTAAGTTCCGCCACGAGCGCAACCCTTAGCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAcc                                          <  2:2726031/140‑1 (MQ=255)

                                                                                  tGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAggg                                      >  1:1257945/1‑140 (MQ=17)

                                                                                     tGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAc                                           <  2:4899681/132‑1 (MQ=17)

                                                                                       ggTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAcc                                          <  1:5726806/131‑1 (MQ=17)

                                                                                       ggTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAcc                                          >  2:5726806/1‑131 (MQ=18)

                                                                                       ggTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTaca                                 <  1:4385129/140‑1 (MQ=17)

                                                                                       ggTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTaca                                 <  2:6274223/140‑1 (MQ=17)

                                                                                        gTTAAGTCCCGCAACTAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTacac                                <  2:137635/140‑1 (MQ=17)

                                                                                        gTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTacac                                <  2:635235/140‑1 (MQ=17)

                                                                                         ttAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTacaca                               <  2:3900572/140‑1 (MQ=17)

                                                                                         ttAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTacaca                               <  2:6664426/140‑1 (MQ=17)

                                                                                         ttAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTacaca                               <  2:7278954/140‑1 (MQ=17)

                                                                                           aaGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACg                             <  2:4607857/140‑1 (MQ=17)

                                                                                           aaGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACg                             <  2:5672090/140‑1 (MQ=17)

                                                                                            aGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACATCAGGTCATCATGGCCCTTACAACCAGGGCTACACACGt                            >  2:2339147/1‑140 (MQ=255)

                                                                                             gTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTg                           >  2:5223496/1‑140 (MQ=17)

                                                                                              tCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGc                          >  1:7006693/1‑140 (MQ=18)

                                                                                              tCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGc                          >  1:4089011/1‑140 (MQ=17)

                                                                                              tCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGc                          >  1:4757269/1‑140 (MQ=18)

                                                                                              tCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCAGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGAGGGGATGACGTCAAGTCATCATGCCCCTTACGACCAAGGCTACACACGAGc                          >  2:4763888/1‑140 (MQ=11)

                                                                                                 cGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGAGGACGTCAAGTCAACATAGCCCTTACAACCAGGGCTACACACGTGCTAc                       >  2:2225165/1‑140 (MQ=11)

                                                                                                      cGAGCGCAACCCTTATCTTTTGTTGCCAGCTTTCCTGCCTGGAACTCATAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATgg                  <  2:3536073/140‑1 (MQ=11)

                                                                                                      cGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATgg                  <  1:4491529/140‑1 (MQ=17)

                                                                                                        aGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGAGTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGgcg                <  1:7453324/140‑1 (MQ=17)

                                                                                                        aGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGgcg                <  2:890214/140‑1 (MQ=17)

                                                                                                           gcAACCCTTATCTTTTGTTGCCTGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCAt             <  1:2577507/140‑1 (MQ=17)

                                                                                                           gcAACCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCAt             <  1:6669705/140‑1 (MQ=17)

                                                                                                           gcAACCCTTATCTTTCGTTGCCCGCGGTCCAGCCGGGTACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCAt             <  1:3448189/140‑1 (MQ=255)

                                                                                                              aCCCTTATCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATACa          <  1:6609402/140‑1 (MQ=17)

                                                                                                               cccTTATCTTTTGTTACCAGCGCTCCAGCCGGGAACTGAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATACaa         <  1:2634020/140‑1 (MQ=255)

                                                                                                                    aTCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATACAAAgaga    >  1:750999/1‑140 (MQ=18)

                                                                                                                    aTCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATACAAAgaga    >  1:1806620/1‑140 (MQ=18)

                                                                                                                     tCTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATACAAAGAGaa   <  2:285076/140‑1 (MQ=17)

                                                                                                                      cTTTTGTTGCCAGCGGTCCAGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATACAAAGAGAAg  <  1:5331534/140‑1 (MQ=14)

CAGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATACAAAGAGAAG  >  NC_000913/224771‑225028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`