| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,692,675 | T→C | V59V (GTA→GTG) | uidC ← | outer membrane porin family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,692,675 | 0 | T | C | 98.9% | 1314.7 / NA | 372 | V59V (GTA→GTG) | uidC | outer membrane porin family protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (215/153); minor base A (1/3); total (216/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 378 total aligned reads displayed.
AAACTTTTATCACCATCAAGATACCACCGGGTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCA > NC_000913/1692538‑1692810 | aaCTTTTATCACCATCAAGATACCACCGGGTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCAcc < 2:6988794/140‑1 (MQ=255) ttttATCACCATCAAGATACCACCGGGTACTTATACCAGCACGAGCACTTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCAt < 2:2185139/140‑1 (MQ=255) ttttATCACCATCAACATACCAACGAGTATTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCAt < 1:3153674/140‑1 (MQ=255) ttATCACCATCAAGATACCACCGGGTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGc < 1:6550744/140‑1 (MQ=255) tATCACCATCAAGATACCACCGGGTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCg > 1:5198210/1‑140 (MQ=255) cACCATCAAGATACCACCGGGTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTaa < 2:5997741/140‑1 (MQ=255) cACCATCAAGATACCACCGGGTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGCaa < 2:4826914/140‑1 (MQ=255) tACCACCGGGTACTCATGTCAGCACGAGCACCTAAGTTAGAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTcc < 2:3092255/140‑1 (MQ=255) ccaccGGGTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCcg > 2:4037484/1‑140 (MQ=255) ccGGGTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCGATCATCCCTGCACCCATGCGTAAATATCTCTTCCCgcgc > 2:2787674/1‑140 (MQ=255) ccGGGTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCgcgc < 1:5582553/140‑1 (MQ=255) ccGGGTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGACCAATCCTCCCTGCACCCATGCGTaa < 2:5106591/124‑1 (MQ=255) cGGGTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGcc > 2:1417254/1‑140 (MQ=255) ggTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCAACCACGCATAAATATCTCTTCCCGCGCCAg > 1:2750149/1‑140 (MQ=255) ggTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCGCCCTGCAACCAAGCATAAATAACTCTTCCCGCGCCAg > 1:2308915/1‑140 (MQ=255) gTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGc > 1:4462045/1‑140 (MQ=255) gTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGc > 2:1104090/1‑140 (MQ=255) gTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAA‑CGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCa < 2:6039047/140‑1 (MQ=255) tACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCa < 1:6016981/140‑1 (MQ=255) tACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCa < 1:7016984/140‑1 (MQ=255) tACTCATAACAGCACGAGCACCTAATTTATAAACATAATATGCCCCGCCTGCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCa < 1:7509380/140‑1 (MQ=255) tCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTg > 2:1898348/1‑140 (MQ=255) atCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTCAATTTCTCTTCCCGCGCCAGCACTGGGCt > 1:3307477/1‑140 (MQ=255) atCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCt > 2:905326/1‑140 (MQ=255) aGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTAt > 2:4226731/1‑140 (MQ=255) cACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGcc > 2:4307268/1‑124 (MQ=255) cACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCAc < 2:6540657/129‑1 (MQ=255) cACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATcc > 2:5587908/1‑140 (MQ=255) aCGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCGGCACCCATCCGTGAGTATCTCTTCCTGCGCAAGCACTGGCCTTATCCg > 2:3493680/1‑140 (MQ=255) gCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCt > 2:1287929/1‑140 (MQ=255) gCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCt > 2:5840936/1‑140 (MQ=255) ttATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTc < 1:3845138/140‑1 (MQ=255) tataAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCg < 2:6394757/140‑1 (MQ=255) taAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAAAATCTCTTCTCGCGCCAGCACTGGGCGTATCACCCCTGCGTAATTCGtt > 2:3393777/1‑140 (MQ=255) aaCATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGtttt > 1:474481/1‑140 (MQ=255) aaCATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGtttt < 1:1104090/140‑1 (MQ=255) aaCATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGtttt > 1:4832635/1‑140 (MQ=255) ataataCGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCCGCACTGGGCTTGTCCGCCCTGCGCAATTCGTTTTTCa > 1:3010347/1‑140 (MQ=255) ataataCGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCa > 1:1278820/1‑140 (MQ=255) ataataCGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCa > 2:6272347/1‑140 (MQ=255) ataataCGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCa > 2:3760166/1‑140 (MQ=255) aataCGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGt < 1:1548512/140‑1 (MQ=255) taCGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCACGCGCCAGGACTCGGCTTATCCGCCATGCGCAATTCGTTTTTCAGTCt > 2:2476649/1‑140 (MQ=255) aCGCCCCGCCTTCAACGACAATCATATTGGAATAATAACTACTATTGACATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTg < 2:2028739/140‑1 (MQ=255) cccGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTg < 2:1628249/136‑1 (MQ=255) cccGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGc > 1:1797805/1‑140 (MQ=255) cccGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGc > 1:262664/1‑140 (MQ=255) ccGCCTTCAACGCCAATAATATTGGAATAATAACTACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCGTATCCGCGCTGGGCGATTCGTGTTTCAGTCTGATGCg > 1:3592979/1‑140 (MQ=255) cGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGt < 1:6864592/140‑1 (MQ=255) gCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTa > 1:6804754/1‑140 (MQ=255) ccTTCAACGCCAATATTATTGGCATCATACCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAg < 1:2013381/140‑1 (MQ=255) ttCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTc < 2:7323934/140‑1 (MQ=255) cAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTccc > 2:5312854/1‑140 (MQ=255) aaCGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTa > 1:6501020/1‑134 (MQ=255) cAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCa > 2:4772508/1‑140 (MQ=255) taataTTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCg > 1:456969/1‑140 (MQ=255) tGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGcc > 2:4437336/1‑140 (MQ=255) ggAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGGGCAATTCGGTTTGCAGTCTGATGCGAAGTCGCGCTTCATCGTCAGCCa > 2:2291864/1‑140 (MQ=255) ggAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCa > 1:1636082/1‑140 (MQ=255) gAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAg > 2:1182001/1‑140 (MQ=255) taataaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTg > 2:5693475/1‑140 (MQ=255) aataaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgc < 1:895526/140‑1 (MQ=255) ataaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCCGTCGGATACGTAGTCCCGCTTCATCGTCAGCCAGTTgcg > 2:2751036/1‑140 (MQ=255) ataaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcg > 1:7321938/1‑140 (MQ=255) ataaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcg > 2:5554099/1‑140 (MQ=255) ataaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcg > 2:7559002/1‑140 (MQ=255) ataaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcg > 2:5015426/1‑140 (MQ=255) ataaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcg > 2:4677212/1‑140 (MQ=255) taaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcgc > 1:4114055/1‑140 (MQ=255) taaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcgc < 1:1407426/140‑1 (MQ=255) taaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcgc < 1:6272347/140‑1 (MQ=255) taaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcgc < 1:1182001/140‑1 (MQ=255) taaCCACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcgc < 1:5312854/140‑1 (MQ=255) cACTATTGAAATCGAGCCATCCACCCTGCACCCATACGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCa < 2:2662584/140‑1 (MQ=255) cACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCa < 1:5840936/140‑1 (MQ=255) cACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCa < 1:4199693/140‑1 (MQ=255) cACTATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTCTTCAGTCTGATGCGTAATCCCGCTTAATCGTCAGCCAGTTGCGCCGCa > 2:3222525/1‑140 (MQ=255) tATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATaa > 2:6498203/1‑140 (MQ=255) tATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATaa > 2:1538825/1‑140 (MQ=255) tATTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTAAGTCTGATACGTAGTCCCGCTTCATCGTCACCCAGTTGCGCCGCATaa > 2:2857569/1‑140 (MQ=255) aTTGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAg > 2:396787/1‑140 (MQ=255) ttGAAATCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCACTCTGATGCTTAGTCCCTCTTCATCGACAGCCAGTTGCGCCGCATAAGc > 2:2973330/1‑140 (MQ=255) tGAAATCGAGCAATCCTCCCTGAACCCATGCCTAAATATCTCTTCCCGTGCCAGCACTGGGCTTATCCGCACTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCa < 2:3035720/140‑1 (MQ=255) aTCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCAt < 2:7160233/131‑1 (MQ=255) aTCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAgg > 1:6405377/1‑140 (MQ=255) aTCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAgg > 1:7074513/1‑140 (MQ=255) tCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGt < 2:1751411/140‑1 (MQ=255) tCGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGt < 1:5047712/140‑1 (MQ=255) tCGAGCAATCCTCCCGGCACCCATGTGTACATATCTCCTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGt < 1:2878251/140‑1 (MQ=255) tCGAGCAAACCTCCCTGCACCCCTGCGTAACCACCTCTTACCGCGCCACCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGt < 2:3592979/140‑1 (MQ=255) ncGAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGt < 1:5871535/139‑1 (MQ=255) gAGTAATCCTCCCTACACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTaa > 2:4637252/1‑140 (MQ=255) gAGCAATCCTCCCTGCACCCATGCGTAAATCTCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGGaa > 2:6765950/1‑140 (MQ=255) gAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTa < 2:7482856/139‑1 (MQ=255) gAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCCTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTaa > 2:6855512/1‑140 (MQ=255) gAGCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCATCATCGTGAGCCAGCTGCGCCGCATAAGCAGAGGTaa > 1:2515847/1‑140 (MQ=255) gCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCAt > 1:3997249/1‑126 (MQ=255) gCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAgg > 1:5436487/1‑140 (MQ=255) gCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGAAAgg > 1:5758798/1‑140 (MQ=255) gCAATCCTCCCTGCACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGCAGTCCCGCCTCAACGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAgg > 2:2878251/1‑140 (MQ=255) | AAACTTTTATCACCATCAAGATACCACCGGGTACTCATATCAGCACGAGCACCTAATTTATAAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCA > NC_000913/1692538‑1692810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |