| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,698,408 | G→A | A258V (GCA→GTA) | malI ← | DNA‑binding transcriptional repressor MalI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,698,408 | 0 | G | A | 98.0% | 1097.2 / ‑2.0 | 354 | A258V (GCA→GTA) | malI | DNA‑binding transcriptional repressor MalI |
| Reads supporting (aligned to +/- strand): ref base G (2/5); new base A (182/165); total (184/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
Only 100 of 354 total aligned reads displayed.
TGGCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATGCCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGC > NC_000913/1698271‑1698542 | tGGCCCAGGTAACAGGTCTATCGTCAAGTGTGGTTTGTGACGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATAcc < 2:2924671/140‑1 (MQ=255) gCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATAcccc < 1:5945028/140‑1 (MQ=255) gCCCAGGAAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATAcccc < 1:996745/140‑1 (MQ=255) cAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGGTCAAAGTAACGATCCACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCAt < 2:4897811/140‑1 (MQ=255) ggTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCg > 2:6462990/1‑140 (MQ=255) ggTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTCGCCCCCCTGCTTTGAGCAAACAAAACCATACCCCCATCg > 2:2757246/1‑140 (MQ=255) tAACAGGTATATCATTAAGTGTGGTTGGTGTCGCATCTGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATGCCCCCATCGCa < 1:2946481/140‑1 (MQ=255) aCAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAAt < 1:6544264/140‑1 (MQ=255) ggTATATCATCTAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATGCCCCCATCGCAATAGt < 1:5852632/140‑1 (MQ=255) ggTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGt < 1:4593392/140‑1 (MQ=255) tatCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCGCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCg > 2:6845763/1‑140 (MQ=255) tatCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCg > 1:6097107/1‑140 (MQ=255) atcatcAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGt < 2:3759911/140‑1 (MQ=255) tcaAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTtata > 2:7196892/1‑140 (MQ=255) caAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAg > 1:4684952/1‑140 (MQ=255) aaGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAACCCAAACCTTACACCCATCGCAATAGTTTCGTTATAGc > 1:2730325/1‑140 (MQ=255) aaGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGc > 1:7395945/1‑140 (MQ=255) aaGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGc > 1:3943768/1‑140 (MQ=255) aaGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGc > 1:7065666/1‑140 (MQ=255) aGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCa < 2:4667624/140‑1 (MQ=255) aGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCa < 2:3719940/140‑1 (MQ=255) aGTGTGGTTGGTGTAGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCa > 1:6502611/1‑140 (MQ=255) tgtgGTTGGTGTCGCATCGGTAAATGCCGCCAGCGATACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCaaa > 1:344616/1‑140 (MQ=255) tggttggtGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAGCCATACCCCCAACGAAATAGTGTCGTTATAGCAAAcc > 1:2826584/1‑140 (MQ=255) tggttggtGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAAcc > 2:412738/1‑140 (MQ=255) tggttggtGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAAcc > 1:1563934/1‑140 (MQ=255) tggttggtGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAAcc > 2:7054765/1‑140 (MQ=255) ggttggtGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCa < 1:4430978/135‑1 (MQ=255) ggttggtGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCa < 1:4787832/140‑1 (MQ=255) gttggtGTCGCATCGGTTAATGCCGCCAGCGTAACTTGTCGCTCAAAGAAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAAcccc < 2:2654370/140‑3 (MQ=255) gttggtGTCGCATCGGTAAATGGCGCCAGAGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCAc < 1:2467542/140‑1 (MQ=255) gttggtGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGt < 1:5330166/127‑1 (MQ=255) gttggtGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCAc > 2:5792851/1‑140 (MQ=255) gttggtGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCAc > 2:5161146/1‑140 (MQ=255) gttggtGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCAc > 2:7087441/1‑140 (MQ=255) ttggtGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACg < 1:7506702/140‑1 (MQ=255) tgtCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACg < 2:7130384/136‑1 (MQ=255) tgtCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCAc > 1:719285/1‑140 (MQ=255) gtCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACt > 1:4997960/1‑140 (MQ=255) gtCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACt > 2:5462039/1‑140 (MQ=255) cGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGa < 2:1889981/140‑1 (MQ=255) cATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCAGCGCAATATTTTAGTGATAGCATACCACGGCACTGATg > 1:3577280/1‑140 (MQ=255) aTCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATgg < 2:6174574/140‑1 (MQ=255) aTCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATgg < 2:1342759/140‑1 (MQ=255) aTCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATgg < 2:3875523/140‑1 (MQ=255) aTCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATAGCAATAGGTTCGTTATAGCAACCCACGGCACTGATgg > 1:2214739/1‑140 (MQ=255) tCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGt < 1:7344481/140‑1 (MQ=255) tCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGt < 1:560610/140‑1 (MQ=255) gTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCTTTATAGAAAACCAGGGCACTGATGGTCgg > 1:1928663/1‑140 (MQ=255) gTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCa < 1:1393145/124‑1 (MQ=255) gTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCgg > 1:210641/1‑140 (MQ=255) aTGCCGCCAGCGAAACCTGTTGGTCAAAGTAACGATCGATTCCGCTTTTCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATGCCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTa < 2:2498701/140‑1 (MQ=255) tGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTAt < 2:1725874/140‑1 (MQ=255) ccAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGt > 2:398059/1‑140 (MQ=255) cAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTa > 2:6325110/1‑140 (MQ=255) aaaCCTGTTGCTCAAGGTAACGATCTACTTCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAgc < 1:2561186/140‑1 (MQ=255) aaaCCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAgc < 2:7555137/140‑1 (MQ=255) aaCCTGTTGCTCAAAGTAACGATCGTCTCGGCTTTCCGCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAgcg < 1:2511706/140‑1 (MQ=255) aaCCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAgcg < 1:1017359/140‑1 (MQ=255) aaCCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAgcg < 2:5609011/140‑1 (MQ=255) ccTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGcc < 1:787983/140‑1 (MQ=255) ttGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACAGCACTGATGGTCGGATTATGACGTAAAAGCGCCGTGa > 1:3090981/1‑140 (MQ=255) tGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGAt < 1:5167703/140‑1 (MQ=255) cAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGTTAGTTGGGTTATAACGTAAAAGCGCCGTGATAGCt > 2:3514865/1‑140 (MQ=255) aGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTcc > 2:2538583/1‑140 (MQ=255) gTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCcg < 1:3778580/140‑1 (MQ=255) gATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGgct < 2:5190602/140‑1 (MQ=255) gACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTTTGACGTATAAGGGCGGTGATAACTTCCGCGgcttgct > 1:2157670/1‑140 (MQ=255) gACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGgcttgct > 2:1156119/1‑140 (MQ=255) gACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGgcttgct > 2:5894473/1‑140 (MQ=255) cTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTc > 2:6583354/1‑140 (MQ=255) cTCCGCTTTCCCCGCTATGCCGACCTGCTTTGAGCCAACTAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTc < 2:3577280/140‑1 (MQ=255) cGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGGCGTAAAAACGCCGTGATAGCTCCCGCGGCTTGCTTctgc > 2:2371285/1‑139 (MQ=255) gCTTTCCCCGCTTTGCCCCCCTGCTTTGAGCTAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTctggc < 2:2823140/140‑1 (MQ=255) tCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGa > 2:7347650/1‑140 (MQ=255) cccGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAg > 1:6958810/1‑140 (MQ=255) cGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTg < 2:3153104/140‑1 (MQ=255) cGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTg < 1:7097981/140‑1 (MQ=255) cGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTg < 2:4326646/140‑1 (MQ=255) cTTTGCCGCCCTGCTTTCAGCACACCAAACCTTACGCCCCTCGCAATACTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGTAAGTGCa < 2:1928663/140‑1 (MQ=255) ttGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTTAAAGCGCCGTGAAAGCATCCGCGGCTTGCTACTGGCTGGAAGTGCACt > 2:2236296/1‑140 (MQ=255) tGCCGCCCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTc > 1:4275562/1‑140 (MQ=255) gccgccCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTg < 2:4978425/134‑1 (MQ=255) cgccCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCaa > 1:1700014/1‑140 (MQ=255) cgccCTGCTTTGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCaa < 2:7415029/140‑1 (MQ=255) cccTGCTTTGAGCAAACAAAACCATACCCCCCTCGTAATTGTTTCGTTCTAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGACTGGAAGTGCACTCCAaca < 2:2157670/140‑1 (MQ=255) tttGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAAt < 2:1563934/140‑1 (MQ=255) tttGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAAt < 2:4275562/140‑1 (MQ=255) tGAGCAAACCAAACCATACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCg > 2:6534591/1‑140 (MQ=255) accaaaccaTACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCa > 2:4462229/1‑122 (MQ=255) accaaaccaTACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCa < 1:4462229/122‑1 (MQ=255) accaaaccaTACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAaca > 1:6369752/1‑125 (MQ=255) accaaaccaTACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGaa > 2:678655/1‑140 (MQ=255) accaaaccaTACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGaa > 1:2778912/1‑140 (MQ=255) accaaaccaTACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGaa > 1:1244604/1‑140 (MQ=255) accaaaccaTACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGaa > 1:1085261/1‑140 (MQ=255) accaaaccaTACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCGTCTAGCTGGAAGTGCAGTCCATCACCCAATCGCTATGaa > 2:2125933/1‑140 (MQ=255) aaccaTACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACgg < 2:3915710/140‑1 (MQ=255) accaTACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGc < 2:4786187/140‑1 (MQ=255) accaTACCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGc > 1:7292108/1‑140 (MQ=255) | TGGCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACTCCGCTTTCCCCGCTTTGCCGCCCTGCTTTGAGCAAACCAAACCATGCCCCCATCGCAATAGTTTCGTTATAGCAAACCACGGCACTGATGGTCGGGTTATGACGTAAAAGCGCCGTGATAGCTTCCGCGGCTTGCTTCTGGCTGGAAGTGCACTCCAACACCCAATCGCTATGAAACGGC > NC_000913/1698271‑1698542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |