| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,745,702 | G→A | G142G (GGC→GGT) | ydhQ ← | adhesin‑like autotransporter YdhQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,745,702 | 0 | G | A | 98.1% | 1105.7 / NA | 368 | G142G (GGC→GGT) | ydhQ | adhesin‑like autotransporter YdhQ |
| Reads supporting (aligned to +/- strand): ref base G (0/3); major base A (205/152); minor base C (0/7); total (205/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.81e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 379 total aligned reads displayed.
TCACTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCGCCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAG > NC_000913/1745565‑1745841 | tCACTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGgccacc < 1:5592489/140‑1 (MQ=255) cACTGGCTTTCCCGGCCAGCATAAAAACGCCTCCCGGATTAATCTCACTATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCAccc < 2:3347494/140‑1 (MQ=255) cACTGGCTTTCCCGGCCAGCATAAAAACGCCTCACGGATTAATCTCACTATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCAccc < 2:3382788/140‑1 (MQ=255) cACTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCAccc < 2:6016488/140‑1 (MQ=255) cTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCTGATTAATCTCACGATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCctc > 2:4718739/1‑140 (MQ=255) cTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGATGTTGTCTCATTAATCAACAGGCCACCctc > 1:2125635/1‑140 (MQ=255) gCTTTCCCGGCCAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTg > 1:1094401/1‑140 (MQ=255) gCTTTCCCGGCCAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTg > 2:1289557/1‑140 (MQ=255) ttCCCGGCCAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATc > 1:962809/1‑140 (MQ=255) tCCCGGCCAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCg > 1:7317331/1‑140 (MQ=255) cccGGCCAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCctc < 2:7227609/132‑1 (MQ=255) ccAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATg > 1:1839214/1‑140 (MQ=255) ccAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGACCCATTAACCACCAGGCCACCCTCTTGATCGAGAATg > 1:2743205/1‑140 (MQ=255) ccAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGACCCATTAACCAACATGCCACCGTCTTGATCGAGAATg > 1:3691460/1‑140 (MQ=255) cATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATc > 2:6909742/1‑129 (MQ=255) aCGCCGCCCTGATTATTCTCACCATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCcgc < 1:2579170/140‑1 (MQ=255) gccgccCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCcgcgc < 1:1453154/140‑1 (MQ=255) gccgccCTGATTAATCCTACAAGTGCTGGCCGCCCCACCGGGATACACGAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCcgcgc < 2:3522195/140‑1 (MQ=255) cgccCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGa < 2:1630400/140‑1 (MQ=255) cgccCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGa < 1:4048100/140‑1 (MQ=255) cgccCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGACAATGATTTTTTCCGCGCGa < 1:5428803/140‑1 (MQ=255) gccCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGAt > 2:282398/1‑140 (MQ=255) ccTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGt < 2:1094401/140‑1 (MQ=255) ccTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGt < 2:7464690/140‑1 (MQ=255) gATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCt < 1:6859472/140‑1 (MQ=255) aTTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCtt > 2:5785459/1‑140 (MQ=255) aTTAATCTCACAATTACTGGCTTCCTCACATGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCCCCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCtt < 1:3034234/140‑1 (MQ=255) aTCTCACAATGGCGGCCTCCCCCCCCTGAATACACAACCAATTCACC‑CCCTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGt < 1:4343629/140‑1 (MQ=255) tctcACAATTGCTGGCTTCCCCCCCCGGACACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGt < 1:2561627/140‑1 (MQ=255) tctcACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGt < 1:6615839/140‑1 (MQ=255) caATTGCTGGCTTCCCCTCCTGTATACACCAACAATTCACCACCTTCAGCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACg < 2:2964445/140‑1 (MQ=255) caATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACGCTCTTGATGGAGAATGGTTTTTTCCGCGCGGTGTCCTTCCAGTACACg > 2:1932939/1‑140 (MQ=255) caATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTc < 2:3919579/131‑1 (MQ=255) caATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACg > 2:1677813/1‑140 (MQ=255) caATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACg > 1:5477331/1‑140 (MQ=255) caATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACg > 2:6599499/1‑140 (MQ=255) cTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTGCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGc > 2:4374254/1‑135 (MQ=255) ttCCCCACCTGGATACACCAACGATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGc < 2:2735614/140‑1 (MQ=255) ttCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGc > 2:1798021/1‑140 (MQ=255) ttCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTACACACGATGTCCTTCCATTACACGCAGGTTACCGc > 2:3488369/1‑140 (MQ=255) ccccACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCa > 1:1210963/1‑140 (MQ=255) ccccACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTGTCCACGCCATGTCCTTACAGTGCACGCAGGTTACCGCCa > 2:2189442/1‑140 (MQ=255) cACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCAttt > 1:250149/1‑140 (MQ=255) cACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCAttt > 1:7225292/1‑140 (MQ=255) ccTGGATACACCAACAATTCACTACCTTCATTTACCACGCCCGCTGAGATTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTc < 2:3210912/140‑1 (MQ=255) cTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTcc > 2:400841/1‑140 (MQ=255) cTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTcc < 1:5759796/140‑1 (MQ=255) ggATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTTCAAGCAGGTTACCGCCATTTTCCAg > 1:2899638/1‑140 (MQ=255) aTACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGca > 1:6256873/1‑140 (MQ=255) cacCAACGATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATATTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGcaaca > 1:4962476/1‑140 (MQ=255) acCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGcaacaa > 1:5147906/1‑140 (MQ=255) caacaaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAAc > 1:5985984/1‑140 (MQ=255) caacaaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAAc > 2:6121377/1‑140 (MQ=255) caacaaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAAc > 1:1794782/1‑140 (MQ=255) caacaaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAAc > 2:7156067/1‑140 (MQ=255) caacaaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAAc > 2:1218429/1‑140 (MQ=255) acaaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCg < 1:58126/140‑1 (MQ=255) acaaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCg < 1:6989389/140‑1 (MQ=255) acaaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCg < 2:1366437/140‑1 (MQ=255) acaaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCg < 2:4962476/140‑1 (MQ=255) acaaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCg < 2:308047/140‑1 (MQ=255) caaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGc > 2:6396504/1‑140 (MQ=255) caaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGc > 2:593061/1‑140 (MQ=255) caaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGc > 2:4487512/1‑140 (MQ=255) caaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGc > 1:6169896/1‑140 (MQ=255) caccacCTTCATCTCCCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCa < 1:7554861/140‑1 (MQ=255) caccacCTTCATCTACCTCGACCGCTGAGGTGGTCTCATGAACCAACATGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCa < 2:2266453/140‑1 (MQ=255) caccacCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCa < 2:6253890/140‑1 (MQ=255) caccacCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCa > 1:6122059/1‑140 (MQ=255) ccccccTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCAt < 1:4201448/136‑1 (MQ=255) accaccTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCAt < 2:5719433/140‑1 (MQ=255) accaccTTCATCTACCACGACCGCTGAGGATGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCAt < 1:3447639/140‑1 (MQ=255) cTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCt > 2:895829/1‑140 (MQ=255) ttCATCGACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCtt > 2:1719969/1‑140 (MQ=255) cATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCg > 1:1596198/1‑125 (MQ=255) aTCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAAcc > 1:1692176/1‑135 (MQ=255) aTCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTAt > 1:7478984/1‑140 (MQ=255) tCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATc > 2:1542378/1‑140 (MQ=255) tACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCa < 1:38410/139‑1 (MQ=255) ccACGACCGCTGAGGTTGTCCCGTTCACCGACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACg < 1:3347124/140‑1 (MQ=255) ccACGACCGCTGAGGTTGTCCCATTAACCAGCAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACg < 1:1354131/140‑1 (MQ=255) ccACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACg < 1:4413694/140‑1 (MQ=255) ccACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACg > 1:5260251/1‑140 (MQ=255) ccACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGCTTACCGCCCTTTACCAGCAACAAACGGCAGACATAACCTTTATCAACg > 2:2611351/1‑140 (MQ=255) gACCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGa > 1:5039728/1‑140 (MQ=255) aCCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTGCAGGAACGAACCGCAGGCATACCCTTTATCAACGCTGaa > 2:2031382/1‑140 (MQ=255) aCCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCCGCAACAAGCCGGAGACATAACATTTATCAACGCTGaa > 1:3287223/1‑140 (MQ=255) aCCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGaa > 1:79997/1‑140 (MQ=255) aCCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGaa > 2:6813115/1‑140 (MQ=255) aCCGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGaa > 1:4648821/1‑140 (MQ=255) cGCTGAGGTTGTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAAtt < 2:7339815/140‑1 (MQ=255) gTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACg > 2:552360/1‑123 (MQ=255) gTCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGAAGGCATAGCCTATATCAACGCCGAATTCACCTTCggg > 1:1977585/1‑140 (MQ=255) tCCCATTAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCt > 2:5391855/1‑124 (MQ=255) aTTAACCAACAGGCCTCCCTCTCGACCGACAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATggc < 1:2192416/140‑1 (MQ=255) aTTAACCAACAGGCCGCCCTCTCGAGCGAAAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATggc < 1:3506613/140‑1 (MQ=255) tAACCAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATggcgg > 2:5153799/1‑140 (MQ=255) cAACAGGCCCCCCTCTACATCGAGAATGATGTTATCCGCTCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCAt < 2:3691460/140‑1 (MQ=255) cAACAGGCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCAt < 2:250149/140‑1 (MQ=255) ggCCACCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATggcgg < 1:6552561/131‑1 (MQ=255) | TCACTGGCTTTCCCGGCCAGCATAAAAACGCCGCCCTGATTAATCTCACAATTGCTGGCTTCCCCACCTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCGCCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAG > NC_000913/1745565‑1745841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |