Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	61,202	A→G	L688P (CTG→CCG)	rapA ←	RNA polymerase‑binding ATPase and RNAP recycling factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	61,202	0	A	G	100.0%	236.0 / NA	66	L688P (CTG→CCG)	rapA	RNA polymerase‑binding ATPase and RNAP recycling factor
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (27/39);  total (27/39)

CGTCCTGATTGATACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCGTTGTATACGCT  >  NC_000913/61071‑61332                                                                                                                                    |                                                                                                                                   cGTCCTGATTGATACCGATAATTTCTAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCa                                                                                                                            <  1:275575/140‑1 (MQ=255) cGTCCTGATTGATACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCa                                                                                                                            <  2:404782/140‑1 (MQ=255)     cTGATTGACACCGATAGAATCGAACAGGTTCTTTGCGAATGCGATCAGATTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGAc                                                                                                                        <  2:319229/140‑1 (MQ=255)      tgattgatACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGAcc                                                                                                                       <  2:507061/140‑1 (MQ=255)            atACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTc                                                                                                                 >  1:632161/1‑140 (MQ=255)             tACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGCTTTGCAACGGGCGGTCACGACCCTGTTcc                                                                                                                >  1:289531/1‑140 (MQ=255)              aCCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCa                                                                                                               >  1:602236/1‑140 (MQ=255)              aCCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCa                                                                                                               >  1:478458/1‑140 (MQ=255)                  ataataTCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCtg                                                                                                           >  2:448427/1‑140 (MQ=255)                  ataataTCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCtg                                                                                                           >  1:46464/1‑140 (MQ=255)                  ataataTCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTACTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCtg                                                                                                           >  2:331379/1‑140 (MQ=255)                   taataTCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCtgt                                                                                                          >  2:376223/1‑140 (MQ=255)                          gAACAGGTTCATGGCCAAGGCGCTCAGGTCGGTATCGCCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCa                                                                                                   <  1:173516/140‑1 (MQ=255)                            aCAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAgc                                                                                                 >  2:38664/1‑140 (MQ=255)                               ggTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCt                                                                                              >  2:599184/1‑140 (MQ=255)                                gTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCtt                                                                                             >  1:618955/1‑140 (MQ=255)                                  tCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCa                                                                                           >  1:531850/1‑140 (MQ=255)                                         gAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCt                                                                                    <  2:339357/140‑1 (MQ=255)                                          aaGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTc                                                                                   >  1:593141/1‑140 (MQ=255)                                          aaGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTc                                                                                   >  2:123450/1‑140 (MQ=255)                                              cGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCgg                                                                               <  2:99409/140‑1 (MQ=255)                                               gATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGc                                                                              <  2:608261/140‑1 (MQ=255)                                                aTCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTTCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCa                                                                             >  1:549647/1‑140 (MQ=255)                                                         gTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGAt                                                                    <  1:655854/140‑1 (MQ=255)                                                         gTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGAt                                                                    <  2:355259/140‑1 (MQ=255)                                                           aTCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCa                                                                  <  1:393849/140‑1 (MQ=255)                                                             cGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGa                                                                <  1:99501/140‑1 (MQ=255)                                                             cGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGa                                                                <  1:38664/140‑1 (MQ=255)                                                               tCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATc                                                              >  1:557730/1‑140 (MQ=255)                                                               tCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATc                                                              >  1:520167/1‑140 (MQ=255)                                                               tCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATc                                                              >  1:73944/1‑140 (MQ=255)                                                               tCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATc                                                              >  1:454780/1‑140 (MQ=255)                                                                   ccTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCa                                                          <  1:568951/140‑1 (MQ=255)                                                                         ctTCAATGCTTTCTGCCAGTGCTTGTGCTTTTTCGCCGCCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCt                                                    <  1:272547/140‑1 (MQ=255)                                                                          ttCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGGTGCTCGCTGCACTTATTGATCAGATCGTCAAAGCCtt                                                   >  1:229627/1‑140 (MQ=255)                                                                            cAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCg                                                 >  1:345799/1‑140 (MQ=255)                                                                                 cTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTTATGTTGCTCGCGCCAGCTTTTGATCAGATCTTCAAAGCCTTCGGTTTg                                            >  2:275328/1‑140 (MQ=255)                                                                                 cTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCCTGTTGCTCGCGGCAGTTGTTGTTCAGATTGTCACAGCCTTCGGTTTg                                            >  1:303073/1‑140 (MQ=255)                                                                                 cTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTg                                            >  2:654500/1‑140 (MQ=255)                                                                                   ttCTGCCAGTGCGTGGGTTTTTTCGCCGCCGTTGGCGTGCATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGAt                                          <  2:206830/140‑1 (MQ=255)                                                                                      tGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCg                                       >  2:366140/1‑140 (MQ=255)                                                                                         cAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTg                                    <  1:376223/140‑1 (MQ=255)                                                                                         cAGTGCCTGGGATTTTTCGCCATCGTTGGAGAGAACTTCTAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTg                                    <  2:289531/140‑1 (MQ=255)                                                                                           gTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGaa                                  >  2:472851/1‑140 (MQ=255)                                                                                               cTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCa                              <  2:602236/140‑1 (MQ=255)                                                                                               cTGGGCTTTTTCGCCACAGTTGCAGTGGATTCCCAGCGGTCGGTCACGCCCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCa                              <  2:229627/140‑1 (MQ=255)                                                                                                 gggCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGa                            <  1:621843/140‑1 (MQ=255)                                                                                                 gggCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGa                            <  1:370773/140‑1 (MQ=255)                                                                                                 gggCTTTTTCGCCACAGTTGGAGTGCATTCCCAGCGGCCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGa                            <  1:248948/140‑1 (MQ=255)                                                                                                    cTTTTTCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAg                         <  1:48057/140‑1 (MQ=255)                                                                                                         tCGCCACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTTCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAAt                    <  2:549647/140‑1 (MQ=255)                                                                                                             cACCGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGa                <  2:618955/140‑1 (MQ=255)                                                                                                               ccGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATc              <  2:557730/140‑1 (MQ=255)                                                                                                                cGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCg             <  1:123450/140‑1 (MQ=255)                                                                                                                cGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCg             <  2:593141/140‑1 (MQ=255)                                                                                                                cGTTGGAGTGGATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCg             <  2:73944/140‑1 (MQ=255)                                                                                                                         ggATTTCCAGCGGGCGGTCACGTCCCTGTTCGAGCTGTGTTTTCAGCGTTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCGTTGTATACg    <  2:241956/140‑1 (MQ=255)                                                                                                                         ggATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCGTTGTATACg    <  1:137299/140‑1 (MQ=255)                                                                                                                         ggATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCGTTGTATACg    <  2:46464/140‑1 (MQ=255)                                                                                                                         ggATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCGTTGTATACg    <  1:472851/140‑1 (MQ=255)                                                                                                                         ggATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCGTTGTATACg    <  2:345799/140‑1 (MQ=255)                                                                                                                          gATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCg             <  1:111949/130‑1 (MQ=255)                                                                                                                          gATTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCg             >  2:111949/1‑130 (MQ=255)                                                                                                                           aTTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCGTTGTATACGCt  <  2:478458/140‑1 (MQ=255)                                                                                                                           aTTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCGTTGTATACGCt  <  2:461398/140‑1 (MQ=255)                                                                                                                           aTTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCGTTGTATACGCt  <  2:432042/140‑1 (MQ=255)                                                                                                                           aTTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCGTTGTATACGCt  <  1:422595/140‑1 (MQ=255)                                                                                                                           aTTTCCAGCGGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCGTTGTATACGCt  <  1:449881/140‑1 (MQ=255)                                                                                                                                    |                                                                                                                                   CGTCCTGATTGATACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGATCAGATCGTCAAAGCCTTCGGTTTGATCCGGTGAAGCCAGATAGTTAATCAGATCGTTGTATACGCT  >  NC_000913/61071‑61332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑