Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,651,664 (A)7→6 pseudogene (374/746 nt) yhiS → putative uncharacterized protein YhiS

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,651,6580A.99.0% 421.6 / 2.1 105pseudogene (368/746 nt)yhiSputative uncharacterized protein YhiS
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base . (57/45);  total (59/46)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.93e-01

Only 100 of 115 total aligned reads displayed.

ACTACATATACAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACT  >  NC_000913/3651519‑3651791
                                                                                                                                           |                                                                                                                                     
acTACATATACAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGa                                                                                                                                       <  2:475597/140‑1 (MQ=255)
    cATATACAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGaaaaa                                                                                                                                   >  1:485991/1‑140 (MQ=255)
    cATATACAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGaaaaa                                                                                                                                   >  1:444393/1‑140 (MQ=255)
    cATATACAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATAAATACTTAATCAGATTAATAAGATTAGATATGaaaaa                                                                                                                                   >  1:269557/1‑140 (MQ=255)
     atatACAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGaaaaaa                                                                                                                                  <  1:477188/140‑1 (MQ=255)
        taCAAATGCAGACTACTCAAAAGTTGTGGTTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGaaaaaacaa                                                                                                                               <  1:414599/140‑4 (MQ=255)
        taCAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGaaaaaacaa                                                                                                                               >  2:748394/1‑137 (MQ=255)
        taCAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGaaaaaacaa                                                                                                                               >  2:767969/1‑137 (MQ=255)
        taCAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGaaaaaacaa                                                                                                                               >  1:557605/1‑137 (MQ=255)
          cAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACaaaa                                                                                                                            >  1:824747/1‑140 (MQ=255)
            aaTGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATCACGTTAGATGTGAAAAAACAAAAGt                                                                                                                          >  1:409850/1‑140 (MQ=255)
              tGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAGGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGc                                                                                                                        >  2:689350/1‑140 (MQ=255)
              tGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGc                                                                                                                        >  2:144762/1‑140 (MQ=255)
              tGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGc                                                                                                                        >  1:505903/1‑140 (MQ=255)
              tGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGc                                                                                                                        >  2:647035/1‑140 (MQ=255)
              tGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGc                                                                                                                        >  2:840776/1‑140 (MQ=255)
              tGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAAGCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGc                                                                                                                        >  2:381390/1‑140 (MQ=255)
               gCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCt                                                                                                                       >  2:677416/1‑140 (MQ=255)
                cAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTg                                                                                                                      >  2:449135/1‑140 (MQ=255)
                   actactCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAAt                                                                                                                   >  1:24836/1‑140 (MQ=255)
                   actactCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAAt                                                                                                                   >  2:848379/1‑140 (MQ=255)
                    ctactCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATg                                                                                                                  <  1:144762/140‑1 (MQ=255)
                       ctCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACaaaa                                                                                                                            >  1:156275/1‑127 (MQ=255)
                       ctCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCg                                                                                                               >  1:202698/1‑140 (MQ=255)
                        tCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATTACATTAGTTATTAAGAAACAATAGTGCTGAATGTCGa                                                                                                              >  1:421684/1‑140 (MQ=255)
                            aaGATGTGGCTCAACTTGTAAGACTGATTACTAACATTGAAACGATAAGTTCGACTCAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACCTTAGATATGAAAAAACAAAATTGCTGAATGTCGAATCa                                                                                                          <  1:568106/140‑1 (MQ=255)
                             aGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCAt                                                                                                         >  2:386998/1‑140 (MQ=255)
                                tgtgGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGt                                                                                                      <  1:748394/140‑1 (MQ=255)
                                 gtgGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGGTAAGTTCGACACAACTTACGCAACAGACACATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTa                                                                                                    <  2:345906/140‑1 (MQ=255)
                                 gtgGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGtt                                                                                                     >  1:655508/1‑140 (MQ=255)
                                      tCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGc                                                                                                <  1:677416/140‑1 (MQ=255)
                                       cAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCt                                                                                               <  1:386998/140‑1 (MQ=255)
                                       cAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCt                                                                                               <  1:840776/140‑1 (MQ=255)
                                                    ttattaCTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTTCTGAATGACGAATCATGGTTAGCGCTAATCCTAAACCCg                                                                                  >  2:313431/1‑140 (MQ=255)
                                                     tattaCTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGa                                                                                 <  1:848379/140‑1 (MQ=255)
                                                      attaCTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGAc                                                                                >  2:152500/1‑140 (MQ=255)
                                                      attaCTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGAc                                                                                >  2:143253/1‑140 (MQ=255)
                                                       ttaCTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGGATCATTGTTATCGCt                                                                                               >  2:165927/1‑124 (MQ=255)
                                                       ttaCTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGGATCATTGTTATCGCt                                                                                               <  1:165927/124‑1 (MQ=255)
                                                       ttaCTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACa                                                                               >  2:800756/1‑140 (MQ=255)
                                                          cTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAgg                                                                            <  1:767969/140‑1 (MQ=255)
                                                           tAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGc                                                                           <  2:202698/140‑1 (MQ=255)
                                                            aaCATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCa                                                                          >  1:49455/1‑140 (MQ=255)
                                                               aTTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATc                                                                       >  2:774759/1‑140 (MQ=255)
                                                                ttGAAACGCTAAGTTCCACACAACTTACGCAACAGGCACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCa                                                                      <  2:409850/140‑1 (MQ=255)
                                                                ttGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCa                                                                      <  1:711458/140‑1 (MQ=255)
                                                                     aCGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACt                                                                 >  2:550701/1‑140 (MQ=255)
                                                                     aCGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATGGTTATCGGTAATCCTAAACCCAACAAGGCAATCATAACt                                                                 >  2:289127/1‑140 (MQ=255)
                                                                         tAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTaaaa                                                             >  1:59338/1‑140 (MQ=255)
                                                                         tAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCATAAACCCGACAAGACAATCATAACTaaaa                                                             >  1:371802/1‑140 (MQ=255)
                                                                          aaGTTCGAGACAACTTAGGCAACAGACACAGCCGAAACTAAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAAt                                                            <  2:421684/140‑1 (MQ=255)
                                                                          aaGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAAt                                                            <  1:100379/140‑1 (MQ=255)
                                                                              tCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGc                                                        <  2:88923/140‑1 (MQ=255)
                                                                                 acacAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTa                                                     <  2:505903/140‑1 (MQ=255)
                                                                                   acaACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTaga                                                   <  2:59338/140‑1 (MQ=255)
                                                                                    caACTTACGCAACAGACACAATGAATACTTAGTCACATTGATAACATTTGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTagaa                                                  <  2:269557/140‑1 (MQ=255)
                                                                                    caACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTagaa                                                  <  2:485991/140‑1 (MQ=255)
                                                                                    caACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTagaa                                                  <  2:444393/140‑1 (MQ=255)
                                                                                     gaCTTACGCAACAGACACAATCTATGCTTGATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTagaag                                                 <  1:300495/139‑1 (MQ=255)
                                                                                       cTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAagag                                               >  1:361794/1‑140 (MQ=255)
                                                                                       cTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAagag                                               >  2:126800/1‑140 (MQ=255)
                                                                                          aCGCAACAGACACAATCAATACTTAATCATATTAATATCATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGa                                            <  1:381390/140‑1 (MQ=255)
                                                                                          aCGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGa                                            <  1:653833/140‑1 (MQ=255)
                                                                                          aCGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGa                                            <  1:550701/140‑1 (MQ=255)
                                                                                          aCGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGa                                            <  2:509830/140‑1 (MQ=255)
                                                                                          aCGCAACAGACACAAGCAATACTTAGTCAGATTAATATCATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGa                                            <  1:324561/140‑1 (MQ=255)
                                                                                          aCGCAACAGACACAAACAATACATAATCATATTAATAGCATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGa                                            <  1:341038/140‑1 (MQ=255)
                                                                                           cGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGaa                                           <  1:774759/140‑1 (MQ=255)
                                                                                               aCAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTATACCCGACAAGGCAATCTTAACTAAAGTTAGGGTAGAAGAGGGAATAcc                                       >  2:246870/1‑140 (MQ=255)
                                                                                               aCAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATAcc                                       >  2:527144/1‑140 (MQ=255)
                                                                                                cAGACACAATCAATACTTAATCTGACTAACAACATTATATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATAccc                                      <  1:239424/140‑1 (MQ=255)
                                                                                                cAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATAccc                                      >  1:792527/1‑140 (MQ=255)
                                                                                                  gACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATTATAACTAAAATTAGCGTAGAAGAGGGAATACCCAt                                    >  2:313070/1‑140 (MQ=255)
                                                                                                  gACACAATCAATACTAAATCAGCTTTATATCATTAGAAATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCAt                                    <  1:246870/140‑1 (MQ=255)
                                                                                                     acaATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAAACATAACTGAAATTAGCATAGAAGAGGGAATACCCATAAc                                 >  2:341038/1‑140 (MQ=255)
                                                                                                          caatACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCa                            >  1:583192/1‑140 (MQ=255)
                                                                                                             tACTTAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAgtg                         >  2:164506/1‑140 (MQ=255)
                                                                                                                 tAATCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCa                     >  1:674257/1‑140 (MQ=255)
                                                                                                                   aTCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCaaa                   >  2:34045/1‑140 (MQ=255)
                                                                                                                   aTCAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCaaa                   >  2:707206/1‑140 (MQ=255)
                                                                                                                    tCAGATTAATAACATCAGATATCAACAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAAc                  <  1:240319/140‑1 (MQ=255)
                                                                                                                     cAGATTAATAACATTAGATATGAAATAACCAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAAcc                 <  1:289127/140‑1 (MQ=255)
                                                                                                                     cAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAGGAGGGAATACCCATAACATTCAGTGTCCAAAcc                 <  1:600525/140‑1 (MQ=255)
                                                                                                                     cAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAAcc                 <  2:49455/140‑1 (MQ=255)
                                                                                                                     cAGATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACAAAAATTAGAGTAGAAGAGGGAATACGCATAGCATTCAGTGTCCAAAcc                 >  2:240319/1‑140 (MQ=255)
                                                                                                                       gATTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCAt               >  1:468131/1‑140 (MQ=255)
                                                                                                                        aTTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATg              >  1:674673/1‑140 (MQ=255)
                                                                                                                        aTTAATAACATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATg              >  1:622169/1‑140 (MQ=255)
                                                                                                                         ttgataaCATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGt             >  1:740215/4‑140 (MQ=255)
                                                                                                                             taaCATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAGCAATCAGTGTCCAAACCAtctgtct         >  1:414278/1‑134 (MQ=255)
                                                                                                                             taaCATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATg              >  2:489291/1‑135 (MQ=255)
                                                                                                                             taaCATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATg              <  1:489291/135‑1 (MQ=255)
                                                                                                                             taaCATTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGATTTc         <  1:143253/140‑1 (MQ=255)
                                                                                                                                 aTTAGATATGAAAAAACGAAAGTGCTGAATGTCTAGTCATTGTTATCGTTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGAt     <  2:371802/140‑1 (MQ=255)
                                                                                                                                 aTTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGAt     <  1:619686/140‑1 (MQ=255)
                                                                                                                                 aTTAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGAt     >  2:619686/1‑140 (MQ=255)
                                                                                                                                  ttAGATATGAAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGAt     >  1:537228/1‑140 (MQ=255)
                                                                                                                                  ttAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATa    >  1:9422/1‑140 (MQ=255)
                                                                                                                                  ttAGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATa    >  2:101298/1‑140 (MQ=255)
                                                                                                                                    aGATATGAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACt  <  1:126800/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                     
ACTACATATACAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACT  >  NC_000913/3651519‑3651791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: