| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,227,593 | (G)6→7 | intergenic (‑121/‑88) | pliG ← / → ycgL | inhibitor of g‑type lysozyme/PF05166 family protein YcgL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,227,587 | 1 | . | G | 98.5% | 234.3 / ‑3.5 | 67 | intergenic (‑115/‑94) | pliG/ycgL | inhibitor of g‑type lysozyme/PF05166 family protein YcgL |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (36/30); total (36/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
TCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCC‑‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTGGCATCTTAAAGAGTAAA > NC_000913/1227451‑1227710 | tCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCC‑‑ggg > 2:544156/1‑140 (MQ=255) cTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCC‑‑gggg‑g > 2:18817/1‑140 (MQ=255) gATGCTCTTGATTTTCGCTGGTAGTCTCCTGTTAATAATCAGTACGATTAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCC‑‑gggg‑ggg < 2:392329/140‑2 (MQ=255) tGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCC‑‑gggg‑gggat < 1:679245/140‑4 (MQ=255) tGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCC‑‑gggg‑gggat < 1:544156/140‑4 (MQ=255) tGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCC‑‑gggg‑gggat < 1:479063/140‑4 (MQ=255) tGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCC‑‑gggg‑gggat < 1:427880/140‑4 (MQ=255) tGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCA‑‑gggg‑gggat < 1:726251/140‑4 (MQ=255) ctctTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCC‑‑gggg‑gggatta > 2:658152/1‑135 (MQ=255) ctTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTCAAATCACGTTGTGGGATTTTTCCCG‑GGGG‑GGATTACt > 1:307031/1‑140 (MQ=255) ttGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACtt > 2:759609/1‑140 (MQ=255) tGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGc < 1:733299/140‑1 (MQ=255) gTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTcaaca < 2:4959/140‑1 (MQ=255) gTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTcaaca > 2:441771/1‑140 (MQ=255) gAATGAGTACGATGAACGGTTATAATATAACGATCACTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCg < 2:307090/140‑1 (MQ=255) aaTGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGt > 1:145870/1‑140 (MQ=255) aaTGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGt > 2:14848/1‑140 (MQ=255) tGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAg < 1:18817/140‑1 (MQ=255) gTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGaaa > 2:36806/1‑140 (MQ=255) aTGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGATAAAATCACGTGGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAAAAATGTaa > 2:580604/1‑139 (MQ=255) aCTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGACTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTCCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAg > 1:556080/1‑128 (MQ=255) aCTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGACTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTCCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAg < 2:556080/128‑1 (MQ=255) tGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAgctgg > 2:710023/1‑140 (MQ=255) tGTTATAAGATAACAAGGCCTAACGGGAGATTTCCGGTGCCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAgctgg < 2:407447/140‑1 (MQ=255) ttATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAgctggct < 2:745569/140‑1 (MQ=255) atataaCAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCtt > 2:464141/1‑140 (MQ=255) taaCAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTtgtg > 1:611100/1‑140 (MQ=255) taaCAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACACAACAAAACGTCGATATCTACTGCTGGCTGGCTtgtg > 1:407447/1‑140 (MQ=255) aCAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAATTCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGgc > 1:79376/1‑140 (MQ=255) aCAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGgc > 1:566958/1‑140 (MQ=255) aCAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGgc > 1:79371/1‑140 (MQ=255) aCAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGgc > 2:136196/1‑140 (MQ=255) aCAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGAGCATGGACGCAATAAAACGTAGAAATCTACTGCTGGCTGGCTTCTGgc > 2:381860/1‑140 (MQ=255) cAATCCCTAACGGGAGAATACCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTAAACGAACTGTAGAAATTTACAGTTGGCTGGGTTGTGgcg > 2:422598/1‑140 (MQ=255) tCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGGAATTTAGAGCTGGTTGGCTTGTGGCGCgg > 1:249256/1‑140 (MQ=255) tCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCgg > 1:515985/1‑140 (MQ=255) tCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCgg > 1:216006/1‑140 (MQ=255) tCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCgg > 1:768079/1‑140 (MQ=255) tCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCgg > 1:846727/1‑140 (MQ=255) cccTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCggg > 1:131538/1‑140 (MQ=255) ccTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGt > 1:556691/1‑140 (MQ=255) cTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGtt < 2:42304/140‑1 (MQ=255) tAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGttt > 1:753050/1‑140 (MQ=255) aaCGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTc > 1:542844/1‑140 (MQ=255) aaCGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTc > 1:595246/1‑140 (MQ=255) aCGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCa < 2:611100/140‑1 (MQ=255) cGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCAt < 1:464141/140‑1 (MQ=255) cGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCAt < 2:768079/140‑1 (MQ=255) cGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCAt < 1:136196/140‑1 (MQ=255) cGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCAt < 1:14848/140‑1 (MQ=255) cGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCAt < 1:36806/140‑1 (MQ=255) cGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCAt < 2:216006/140‑1 (MQ=255) cGGGAGAATTCCAGTGGCTTTCCTGCGTTCGATAATATCACGTTGCGGTATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCAt < 2:371111/140‑1 (MQ=255) cGGGAGAATTCCAGTGGCTTTCATGCGTTCGGTAAAAACACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCAt < 1:381860/140‑1 (MQ=255) gggAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCAtt < 2:753050/140‑1 (MQ=255) cAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCt < 1:658152/140‑1 (MQ=255) gTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGt < 2:807345/133‑1 (MQ=255) gTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGt > 1:807345/1‑133 (MQ=255) ttCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCaa > 2:718501/1‑140 (MQ=255) ttCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTAAAGCTGGCTGGCTAGTGCCGCGGGTTTCATTGATGTTAGCTTATGCCaa > 2:362238/1‑140 (MQ=255) tCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCaaa > 2:101373/1‑140 (MQ=255) ccTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCaaaa < 1:101373/140‑1 (MQ=255) tGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCCGGGGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTACAGTGATGTGAGCTTATGCCAAAAc > 1:337443/1‑140 (MQ=255) cGTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTg < 2:595246/140‑1 (MQ=255) cGTTCGGTAAAATCACGTTGCGACACTTTTGCC‑‑GGGGTGGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTg < 1:422598/140‑1 (MQ=255) gTTCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTgg < 2:542844/140‑1 (MQ=255) ttCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTGGc < 2:68219/140‑1 (MQ=255) ttCGGTAAAATCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTGGc > 1:531249/1‑140 (MQ=255) attCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTGGCATCTTaaa < 2:79376/138‑1 (MQ=255) aaTCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTGGCATCTTaaa < 2:566958/140‑1 (MQ=255) aaTCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTGGCATCTTaaa < 2:79371/140‑1 (MQ=255) tCACGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTGGCATCTTAAaga < 2:846727/140‑1 (MQ=255) cGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTGGCATCTTAAAGAGtn > 1:644769/1‑139 (MQ=255) cGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTGGCATCTTAAAGAGTa < 1:596874/140‑1 (MQ=255) cGTTGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTGGCATCTTAAAGAGTa > 1:99542/1‑140 (MQ=255) ttGCGGCATTTTTGCCG‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTGGCATCTTAAAGAGTaaa < 1:647708/140‑1 (MQ=255) | TCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCAGTGGCTTTCCTGCGTTCGGTAAAATCACGTTGCGGCATTTTTGCC‑‑GGGG‑GGATTACTTATAAAGGGGGCATGGACTCAACAAACCGTAGAAATCTACAGCTGGCTGGCTTGTGGCGCGGGTTTCATTGATGTTAGCTTATGCCAAAACCTGGCATCTTAAAGAGTAAA > NC_000913/1227451‑1227710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |