| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,135,234 | G→A | T140I (ACC→ATC) | wzc ← | protein‑tyrosine kinase Wzc |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,135,234 | 0 | G | A | 97.5% | 132.5 / NA | 40 | T140I (ACC→ATC) | wzc | protein‑tyrosine kinase Wzc |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (20/19); minor base T (0/1); total (20/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCACCAGACGCGA > NC_000913/2135098‑2135367 | gACGCCTTCTTTTTTCAGCATCGGGCCCGCTAGCCTCCGGGCGCTAAATCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAgatgg < 2:342346/140‑1 (MQ=255) aCGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAgatggt < 2:713171/140‑1 (MQ=255) aCGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAgatggt > 1:59020/1‑140 (MQ=255) cGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTTTTTCGGACGGTTAAAGATGGTc > 1:342346/1‑140 (MQ=255) ccTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCAc < 2:201976/140‑1 (MQ=255) cttTTTTCAGCATCTGGCCCGCTTGCACCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTc > 1:797279/1‑140 (MQ=255) ttttttCAGCATCTGGCGCGCTTGCCCCCGGTCGCTAAAGCCGCCGTCTCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCa < 2:350156/140‑1 (MQ=255) ttCAGCATCTGGCCCACTTGCCTCCTGGCTCTAAAGCGGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGt < 1:403244/140‑1 (MQ=255) cTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCt > 1:650763/1‑140 (MQ=255) cTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTccc > 2:822342/1‑140 (MQ=255) cTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCCTTCGGGCGCTTAAAGAAGGTCACTTGCACCCTCTCGTTCTGACGTccc > 2:309897/1‑140 (MQ=255) tGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCAt < 2:650763/140‑1 (MQ=255) cccGGGCGCTAAAGCCGTCGTCCCTGCTCAGCGTGTAGTCTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAgg < 2:223014/140‑1 (MQ=255) cccGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACGCCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAgg < 2:629399/140‑1 (MQ=255) cccGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAgg < 2:49722/140‑1 (MQ=255) cccGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAgg < 2:797279/140‑1 (MQ=255) tAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAg > 2:744101/1‑140 (MQ=255) ctgctCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTCCAGACGTCCTATCGGGGGATCCCGGCCCGCACCGAAAAt > 1:265706/1‑140 (MQ=255) aGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCAAGCCCGAACCGAACATCGGGAACGTGttt > 1:397306/1‑140 (MQ=255) ttgttgTCCAGCACATTGAGCGGAAACACCTGATCAGCCTTCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCt < 2:353224/140‑1 (MQ=255) gttgtCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCa < 2:576063/140‑1 (MQ=255) caggtCCAGCACATTTAGCGTAGACCCCTTATCCGCCTTCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCa < 1:292289/137‑1 (MQ=255) caggtCCAGCACATTAATCGTAAACACCTGAACCGCCATGTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCa < 2:336109/137‑1 (MQ=255) gtCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTGCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACTTGTTTTTGCTCACTg < 2:74547/140‑1 (MQ=255) ccAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCa > 1:660058/1‑140 (MQ=255) tAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAGAATCGGGAACGGGTGTTTGCTCACTGCAATATCgctg > 1:336109/1‑137 (MQ=255) tAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATc > 1:540120/1‑136 (MQ=255) tAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATc < 2:540120/136‑1 (MQ=255) tAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAgg > 1:858065/1‑140 (MQ=255) tAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAgg > 1:38032/1‑140 (MQ=255) tAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCACCCCGCACCGAAAGTCGGGAACGTGTATTTGCTCACTGCAATATCgctg > 2:292289/1‑137 (MQ=255) aGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTc > 2:474386/1‑140 (MQ=255) aaCACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATc > 1:721210/1‑140 (MQ=255) acCTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTc < 2:59020/140‑1 (MQ=255) cTGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCa < 1:822342/140‑1 (MQ=255) cTGATCCGCCATCTCTTACGGGCGGTTAAAGTTGGCCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCa < 2:265706/140‑1 (MQ=255) tGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCAc > 2:81779/1‑140 (MQ=255) tGATCCGCCATCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCAc > 2:847929/1‑140 (MQ=255) aTCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTAcc < 1:847929/140‑1 (MQ=255) aTCTCTTTCGGGCGGTTAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTAcc < 1:81779/140‑1 (MQ=255) tctcTTTCGGGCGGTTGAAGATTGTCACTTTTAACTTCTTGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCa < 2:397306/140‑1 (MQ=255) ttAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCACCAGACGcga > 2:144930/1‑140 (MQ=255) ttAAAGATGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCACCAGACGcga > 2:803082/1‑140 (MQ=255) | GACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTCCCATCAGGCGATCCCAGCCCGCACCGAAAATCGGGAACGTGTTTTTGCTCACTGCAATATCGAGGTCGAGATCGTCCACCGTTTTACCAAGCACCAGACGCGA > NC_000913/2135098‑2135367 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |