Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,767,085	G→A	T34T (ACG→ACA)	rnlB →	CP4‑57 prophage; antitoxin RnlB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,767,085	0	G	A	100.0%	257.9 / NA	74	T34T (ACG→ACA)	rnlB	CP4‑57 prophage; antitoxin RnlB
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (38/36);  total (38/36)

TAGAGCGTGGGGAATAATCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACGAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATACGGCCA  >  NC_000913/2766952‑2767218                                                                                                                                      |                                                                                                                                      tAGAGCGTGGGGAATAATCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACtt                                                                                                                                 >  2:164456/1‑140 (MQ=255) tAGAGCGTGGGGAATAATCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACtt                                                                                                                                 >  2:826360/1‑140 (MQ=255)  agagCGTGGGGAATAATCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCCCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACttt                                                                                                                                <  1:603971/140‑1 (MQ=255)     gCGTGGGGAATAATCTAGGACTCATATATTGTTTGAAGTCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTg                                                                                                                             <  1:333809/140‑1 (MQ=255)     gCGTGGGGAATAATCCAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTg                                                                                                                             <  1:328983/140‑1 (MQ=255)     gCGTGGGGAATAATCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGACTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTg                                                                                                                             <  2:212838/140‑1 (MQ=255)      cGTGGGGAATAATCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGc                                                                                                                            >  1:776545/1‑140 (MQ=255)      cGTGGGGAATAATCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGc                                                                                                                            >  1:141488/1‑140 (MQ=255)         ggggAATAATCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCt                                                                                                                         <  2:171093/140‑1 (MQ=255)         ggggAATAATCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCGGCCCt                                                                                                                         <  1:826360/140‑1 (MQ=255)           ggAATAATCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGcc                                                                                                                           >  1:455479/1‑136 (MQ=255)           ggAATAATCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGcc                                                                                                                           <  2:455479/136‑1 (MQ=255)              ataatCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTgg                                                                                                                    <  1:669867/140‑1 (MQ=255)                     aGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCt                                                                                                                         <  1:850446/128‑1 (MQ=255)                     aGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCt                                                                                                                         >  2:850446/1‑128 (MQ=255)                     aGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTga                                                                                                             >  1:217021/1‑140 (MQ=255)                      ggACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTgag                                                                                                            >  2:619413/1‑140 (MQ=255)                       gACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCt                                                                                                                         >  2:135739/1‑126 (MQ=255)                       gACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCt                                                                                                                         <  1:135739/126‑1 (MQ=255)                       gACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTgaga                                                                                                           >  1:210202/1‑140 (MQ=255)                            atatatTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACt                                                                                                      >  2:120080/1‑140 (MQ=255)                            atatatTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTAAATGAAATCGAGACAAAACTTTCTGGCCTACTGGGTAGTGAGACCACt                                                                                                      >  2:313354/1‑140 (MQ=255)                                  tGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGaa                                                                                                >  1:563242/1‑140 (MQ=255)                                  tGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGaa                                                                                                >  1:125311/1‑140 (MQ=255)                                   gTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGaaa                                                                                               <  2:563242/140‑1 (MQ=255)                                    tttGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGTGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAAt                                                                                              >  1:492125/1‑140 (MQ=255)                                    tttGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAGACTGTCTACCCTACTGTGTAGTGAGACCACTGGTGAAAt                                                                                              >  2:246062/1‑140 (MQ=255)                                    tttGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAAt                                                                                              >  2:784686/1‑140 (MQ=255)                                    tttGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAAt                                                                                              >  2:93308/1‑140 (MQ=255)                                    tttGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAAt                                                                                              >  1:41436/1‑140 (MQ=255)                                      tGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAAGTTTATGCACTACTGGGTAGTGAGACCACTGGTGAAATcc                                                                                            >  2:326590/1‑140 (MQ=255)                                      tGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGAc                                                                                                          >  1:771351/1‑126 (MQ=255)                                      tGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGAc                                                                                                          <  2:771351/126‑1 (MQ=255)                                      tGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGaaa                                                                                               >  1:702807/1‑137 (MQ=255)                                      tGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGaaa                                                                                               <  2:702807/137‑1 (MQ=255)                                      tGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATcc                                                                                            >  2:495865/1‑140 (MQ=255)                                      tGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATcc                                                                                            >  1:769419/1‑140 (MQ=255)                                      tGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATcc                                                                                            >  1:557813/1‑140 (MQ=255)                                            cACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTg                                                                                      <  2:776545/140‑1 (MQ=255)                                                  aaTTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACctct                                                                                <  1:719247/140‑1 (MQ=255)                                                    ttAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTCTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTtg                                                                              <  2:125311/140‑1 (MQ=255)                                                           ctcAGGGGCTCTAAAAGCTGTCGTTATGGTGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTa                                                                       <  2:16917/140‑1 (MQ=255)                                                           ctcAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTa                                                                       >  1:836436/1‑140 (MQ=255)                                                            tcAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTaa                                                                      >  1:439720/1‑140 (MQ=255)                                                            tcAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTaa                                                                      >  2:736864/1‑140 (MQ=255)                                                              aGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACg                                                                    <  1:842257/140‑1 (MQ=255)                                                              aGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACg                                                                    <  2:836436/140‑1 (MQ=255)                                                                 ggCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTc                                                                 <  2:583118/140‑1 (MQ=255)                                                                 ggCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTc                                                                 <  2:51113/140‑1 (MQ=255)                                                                 ggCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTc                                                                 <  2:217021/140‑1 (MQ=255)                                                                              gTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCg                                                    <  1:93308/140‑1 (MQ=255)                                                                                cGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCt                                                  >  2:672712/1‑140 (MQ=255)                                                                                        cGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACg                                          <  1:495865/140‑1 (MQ=255)                                                                                         gACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTTTGCGCTAACGGCCCAGAGTGGCACCGCTTCGTTACGc                                         >  1:347592/1‑140 (MQ=255)                                                                                         gACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGc                                         <  1:619413/140‑1 (MQ=255)                                                                                         gACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTGTTGACCTCTTGTGCGCGAACGGTCCAGAGTCGAACCGCTTCGTTACGc                                         >  2:298250/1‑140 (MQ=255)                                                                                          aCCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCt                                        >  1:615692/1‑140 (MQ=255)                                                                                           ccGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTg                                       <  2:141488/140‑1 (MQ=255)                                                                                                      aaCCCTTTGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAata                            <  2:505369/140‑1 (MQ=255)                                                                                                           tttGTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGTCCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGcc                       <  2:776390/140‑1 (MQ=255)                                                                                                              gTCCTCAGTTAATGAGATTGAGCCAAAACTTTCTGCCTTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGa                    <  1:253291/140‑1 (MQ=255)                                                                                                              gTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGa                    <  1:736864/140‑1 (MQ=255)                                                                                                              gTCCTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGa                    <  2:492125/140‑1 (MQ=255)                                                                                                                ccTCAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATc                  >  1:725812/1‑140 (MQ=255)                                                                                                                   cAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGTAATGAAATATGGCCGGATCATg               >  1:305438/1‑140 (MQ=255)                                                                                                                   cAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATg               <  1:853063/140‑1 (MQ=255)                                                                                                                   cAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTAAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGa                    <  2:651306/135‑1 (MQ=255)                                                                                                                   cAGTTAATGAAATTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTAAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGa                    >  1:651306/1‑135 (MQ=255)                                                                                                                              aTTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATa        >  2:729516/1‑136 (MQ=255)                                                                                                                              aTTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATa        <  1:729516/136‑1 (MQ=255)                                                                                                                              aTTGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATACGGc    >  1:841075/1‑140 (MQ=255)                                                                                                                              aTTGAGACAAAACTTTCGGCCCTACTGGGTAGTAATACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATACGGc    <  2:395814/140‑1 (MQ=255)                                                                                                                               ttGAGACAAAACTTTGTGCCCTGCTGGGTCGTGAGACTACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATACGGcc   <  1:326590/140‑1 (MQ=255)                                                                                                                                tGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAGATAGGGACGGATCGTGCTGGATACGGCCa  >  1:395814/1‑140 (MQ=255)                                                                                                                                tGAGACAAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATACGGCCa  >  2:118427/1‑140 (MQ=255)                                                                                                                                      |                                                                                                                                      TAGAGCGTGGGGAATAATCAAGGACTTATATATTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACGAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATACGGCCA  >  NC_000913/2766952‑2767218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑