Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	316,612	A→G	pseudogene (525/687 nt)	ykgA ←	putative DNA‑binding transcriptional regulator YkgA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	316,612	0	A	G	100.0%	240.5 / NA	67	pseudogene (525/687 nt)	ykgA	putative DNA‑binding transcriptional regulator YkgA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (33/34);  total (33/34)

GTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATATCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGA  >  NC_000913/316475‑316745                                                                                                                                          |                                                                                                                                      gTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTc                                                                                                                                     <  1:784781/140‑1 (MQ=255)   aGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCg                                                                                                                                   <  1:454425/140‑1 (MQ=255)   aGGATCATAAAGTCCTCCGGTCTTTGTCCACGCTTCTGGCATGTCAGCCTATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCg                                                                                                                                   <  2:239795/140‑1 (MQ=255)     gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTc                                                                                                                                 >  1:476526/1‑140 (MQ=255)      aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGTCCGATTTTATTGCCGGCTCAAACGTCGAAAGGAAATAGATGTCCGTCt                                                                                                                                >  2:258149/1‑140 (MQ=255)          tAAAGTCCTCGGGTCGTTGTCCTCTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTaaa                                                                                                                            >  1:664320/1‑140 (MQ=255)          tAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGGTTTTGTTGCCGGGTCAAACGTGGAACCGAAATAGATGTCCGTcctgtc                                                                                                                            >  2:386388/1‑135 (MQ=255)          tAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACCGTTCAAATGTGCAAACGAAATCGATGTCCGTCTTaaa                                                                                                                            >  1:368997/1‑140 (MQ=255)           aaaGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTaaaa                                                                                                                           >  2:754286/1‑140 (MQ=255)             aGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAAtt                                                                                                                         <  1:669766/140‑1 (MQ=255)             aGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAAtt                                                                                                                         <  1:639789/140‑1 (MQ=255)               tCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAAttct                                                                                                                       >  2:487086/1‑140 (MQ=255)               tCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACAAATTAGATGACCGTCTTAAAAttct                                                                                                                       >  1:311394/1‑140 (MQ=255)                  tCGGGTCGTTGTCCATTCTTTTTGCCTGTTAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCa                                                                                                                    <  1:258149/140‑1 (MQ=255)                  tCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCa                                                                                                                    <  1:647764/140‑1 (MQ=255)                  tCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCa                                                                                                                    <  1:496305/140‑1 (MQ=255)                  tCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATACTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCa                                                                                                                    >  1:818174/1‑140 (MQ=255)                       tCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACAt                                                                                                               <  2:476526/140‑1 (MQ=255)                       tCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACAt                                                                                                               <  2:486717/140‑1 (MQ=255)                         gTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCt                                                                                                             >  2:681643/1‑140 (MQ=255)                                       tGGCATGTCAGTATATTCACATACCGTACCAGGAAAAGTTTGCACCGTGAGCAAAACTACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGTTGACCGTCTTAAACTTTTTCATAAATTTGGCTAGATGATTAc                                                                                               >  2:598030/1‑140 (MQ=255)                                         gCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGAcgt                                                                                             >  2:31810/1‑140 (MQ=255)                                            tGTCAGCATATTCACATACCGTACCAGCAATAGTTTCAACCTTGAGCAAATCGACCGATTTTGGTGACGGTTCAAACGTGGAAACGAAATATATGTCCGTATTAGAATACTTCATACATCTGTCTAAATGATGAcgtcgt                                                                                          >  2:289341/1‑140 (MQ=255)                                            tGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGAcgtcgt                                                                                          >  2:859903/1‑140 (MQ=255)                                                            tACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCAt                                                                          >  2:20882/1‑140 (MQ=255)                                                             aCCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATc                                                                         >  2:675482/1‑140 (MQ=255)                                                               cGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCg                                                                       >  1:680822/1‑140 (MQ=255)                                                                 tACCGGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGt                                                                     >  2:9931/1‑140 (MQ=255)                                                                 tACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGCAACGAAATAGATGTCCGTCTTAAAATTCTTAATACATCTGGCTCAATAATGACGTCATAGTGTGACTTCTTCATCCGGt                                                                     >  2:260309/1‑140 (MQ=255)                                                                 tACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGGTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGt                                                                     >  1:282536/1‑140 (MQ=255)                                                                 tACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGt                                                                     >  2:622826/1‑140 (MQ=255)                                                                 tACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGt                                                                     >  1:94634/1‑140 (MQ=255)                                                                 tACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGt                                                                     >  1:437651/1‑140 (MQ=255)                                                                 tACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGt                                                                     >  1:461963/1‑140 (MQ=255)                                                                 tACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGt                                                                     >  1:549791/1‑140 (MQ=255)                                                                  aCCAGCAAAAGTTTCAATCGTGCGCAAATCGCCCGTTTTTGTTGACGGCTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTg                                                                    <  2:250974/140‑1 (MQ=255)                                                                      gCAAAAGTTTCAACCGTGAGCAAATCGACCTATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAAGGATGACGACGTAGTATGACTTATTCATCCGGTGAttt                                                                >  1:251287/1‑140 (MQ=255)                                                                       cAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTa                                                               <  1:675482/140‑1 (MQ=255)                                                                       cAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTa                                                               >  1:19045/1‑140 (MQ=255)                                                                         aaaGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGACGACGTCGTAGTCTGGCTTCTTGATCCGGTGATTTAtt                                                             >  1:366125/1‑140 (MQ=255)                                                                           aGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCg                                                           <  2:664320/140‑1 (MQ=255)                                                                           aGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTAACATCTTCAACCGGTGATTTATTCg                                                           >  1:250974/1‑140 (MQ=255)                                                                            gTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGa                                                          <  2:818174/140‑1 (MQ=255)                                                                                 aaCCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACtt                                                     <  1:865767/140‑1 (MQ=255)                                                                                   ccGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCa                                                   <  1:31810/140‑1 (MQ=255)                                                                                   ccGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCa                                                   <  2:437651/140‑1 (MQ=255)                                                                                       gAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGt                                               <  2:94634/140‑1 (MQ=255)                                                                                        aGCAAATCGACCTATTTTGTTGCCGGTTCAACCGTCGAATCGAAATAGGTGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTc                                              <  2:251287/140‑1 (MQ=255)                                                                                        aGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTc                                              <  2:854182/140‑1 (MQ=255)                                                                                        aGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTc                                              >  1:854182/1‑140 (MQ=255)                                                                                        aGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTc                                              <  1:487086/140‑1 (MQ=255)                                                                                        aGCAAATCGACCGATCTTGTTGACGTTTCTAACGTGGCAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTc                                              <  1:260309/140‑1 (MQ=255)                                                                                          cAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCat                                            <  1:9931/140‑1 (MQ=255)                                                                                                       tttGTTGACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGtt                               >  1:644907/1‑140 (MQ=255)                                                                                                        ttgttgACGGTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTg                              <  1:562694/140‑1 (MQ=255)                                                                                                         tgttgACGGTTCAAACGTGGAAGCGAAATGGATGTCCCTCTTAAAATTCTTCATACATCTCGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGc                             <  1:289341/140‑1 (MQ=255)                                                                                                                ggTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAAt                      >  2:63987/1‑140 (MQ=255)                                                                                                                 gTTCAAACGTGGAAACGTAATAGATGTCCGTGTTAGAATGCTTCATACCTCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATa                     <  2:368997/140‑1 (MQ=255)                                                                                                                 gTTCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATa                     >  1:570511/1‑140 (MQ=255)                                                                                                                  ttCAAACGTGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAg                    <  1:63987/140‑1 (MQ=255)                                                                                                                      aaCGTGGAAACGAAAAAGATGTCCGCCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGgtgt                <  1:260247/140‑1 (MQ=255)                                                                                                                          tGGAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCa            >  2:91341/1‑140 (MQ=255)                                                                                                                            gAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAgg          >  1:647293/1‑140 (MQ=255)                                                                                                                            gAAACGAAATAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAgg          >  1:654762/1‑140 (MQ=255)                                                                                                                                    aTAGATGTCCGTCTTAAAATTCTTCATACATCTGGGTAATTGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGa  <  2:311394/140‑1 (MQ=255)                                                                                                                                    aTAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGa  <  2:647293/140‑1 (MQ=255)                                                                                                                                    aTAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGa  <  1:30055/140‑1 (MQ=255)                                                                                                                                    aTAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGa  <  2:37323/140‑1 (MQ=255)                                                                                                                                    aTAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGa  <  1:681643/140‑1 (MQ=255)                                                                                                                                    aTAGATGTCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGa  <  1:859903/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                      GTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTTTCAACCGTGAGCAAATCGACCGATTTTGTTGACGGTTCAAACGTGGAAACGAAATAGATATCCGTCTTAAAATTCTTCATACATCTGGCTAAATGATGACGTCGTAGTTTGACTTCTTCATCCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGA  >  NC_000913/316475‑316745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑