Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 330,537 T→C F359L (TTT→CTT)  betT → choline:H(+) symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913330,5370TC100.0% 204.8 / NA 60F359L (TTT→CTT) betTcholine:H(+) symporter
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (27/33);  total (27/33)

GATGAATAACTGGACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGTTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCGGCTTCTACAGCCTGCTGGCGCAGTATC  >  NC_000913/330407‑330672
                                                                                                                                  |                                                                                                                                       
gATGAATAACTGGACGGTCTTCGTCTGGGCATGGTTGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCa                                                                                                                                <  2:374924/140‑1 (MQ=255)
caggAATAACTGGACCCTCTTCATCCGGGGATGGTGGTTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCa                                                                                                                                <  1:254818/137‑1 (MQ=255)
 aTGAATAACTGGACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCAc                                                                                                                               <  1:648565/140‑1 (MQ=255)
   gAATAACTGGACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGc                                                                                                                             <  2:634913/140‑1 (MQ=255)
   gAATAACTGGACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGACACGTTAATTATTGCGCTTACCTTCACGc                                                                                                                             >  1:421007/1‑140 (MQ=255)
       aaCTGGACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCt                                                                                                                                   <  2:650796/130‑1 (MQ=255)
       aaCTGGACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCt                                                                                                                                   >  1:650796/1‑130 (MQ=255)
       aaCTGGACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGtt                                                                                                                         <  1:171479/140‑1 (MQ=255)
        aCTGGACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTa                                                                                                                        <  1:440943/140‑1 (MQ=255)
           ggACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTa                                                                                                                        >  2:84501/1‑137 (MQ=255)
           ggACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTa                                                                                                                        <  1:84501/137‑1 (MQ=255)
              cGCTCTTCTTCTGGGCATGGTGGGTGGCATGGCCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTAGTGCTGGGGACGATGAGTATTCCGCGTACCGTCACGCTGTTATGGctg                                                                                                                  >  2:254818/1‑139 (MQ=255)
               gCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGctct                                                                                                                 <  2:825668/140‑1 (MQ=255)
                  cttcttctGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCgg                                                                                                              <  1:467122/140‑1 (MQ=255)
                  cttcttctAGGCATGGTCGGTGCCATGGTCGACGTATGTAGGCTTGTTACTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCgg                                                                                                              <  2:387184/140‑1 (MQ=255)
                    tcttctGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGgtg                                                                                                            <  1:654647/140‑1 (MQ=255)
                    tcttctGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGgtg                                                                                                            >  2:728919/1‑140 (MQ=255)
                           ggCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCa                                                                                                     >  2:758198/1‑140 (MQ=255)
                           ggCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTCACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCa                                                                                                     >  2:184839/1‑140 (MQ=255)
                             cATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAAt                                                                                                   >  2:433713/1‑140 (MQ=255)
                             cATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAAt                                                                                                   >  2:606358/1‑140 (MQ=255)
                             cATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCCTACCTTCACGCGGTTATGGCTCTCGGTGTTCGGCAAt                                                                                                   >  1:349126/1‑140 (MQ=255)
                               tggtggGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTGCCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAg                                                                                                 <  1:758198/140‑1 (MQ=255)
                                ggtgggtgGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAgc                                                                                                >  1:40672/1‑140 (MQ=255)
                                 gtgggtggCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTTCCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAgcg                                                                                               <  2:649941/140‑1 (MQ=255)
                                  tgggtggCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAgcgc                                                                                              >  1:627735/1‑140 (MQ=255)
                                  tgggtggCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAgcgc                                                                                              >  1:109001/1‑140 (MQ=255)
                                   gggtggCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAgcgcg                                                                                             <  1:606358/140‑1 (MQ=255)
                                   gggtggCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAgcgcg                                                                                             <  1:28667/140‑1 (MQ=255)
                                   gggtggCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTAGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAgcgcg                                                                                             <  1:439878/140‑1 (MQ=255)
                                     gtggCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCt                                                                                           >  2:496592/1‑140 (MQ=255)
                                     gtggCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCt                                                                                           >  1:671390/1‑140 (MQ=255)
                                         cATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAgcgcg                                                                                             >  2:473759/1‑134 (MQ=255)
                                         cATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAgcgcg                                                                                             <  1:473759/134‑1 (MQ=255)
                                                  cGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAatcatc                                                                              >  2:764748/1‑140 (MQ=255)
                                                  cGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACACTGTTATGTCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAatcatc                                                                              >  2:248548/1‑140 (MQ=255)
                                                           gCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACggcggc                                                                     <  2:40672/140‑1 (MQ=255)
                                                            cTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTTGGCAATACCGCACTATATGAAGTCATCCACGgcggcg                                                                    >  1:405244/1‑140 (MQ=255)
                                                            cTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGgcggcg                                                                    >  1:865274/1‑140 (MQ=255)
                                                                ttCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGgcggcgcggc                                                                <  1:690949/140‑1 (MQ=255)
                                                                 tCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCa                                                               <  1:20439/140‑1 (MQ=255)
                                                                  ccTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCAt                                                              <  1:764748/140‑1 (MQ=255)
                                                                           tATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAgg                                                     <  2:523871/140‑1 (MQ=255)
                                                                             tctcGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTCTGAAATCCTCCTCGGCGGCGCAGCATTTGCCGAGGaa                                                   >  1:327118/1‑140 (MQ=255)
                                                                                    tGGGCGTAGCATTCGCAGGTTCTTGCTGGGTGCGTTGATAATTCCGCTGACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATgg                                            <  2:405244/140‑1 (MQ=255)
                                                                                           aCCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATcc                                     >  1:69067/1‑140 (MQ=255)
                                                                                            ccATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCg                                    <  1:433713/140‑1 (MQ=255)
                                                                                                tCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAgc                                <  1:746937/140‑1 (MQ=255)
                                                                                                tCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTCACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAgc                                <  1:184839/140‑1 (MQ=255)
                                                                                                tCGCCAGTTCGTGCTGGCCACGTTGATTATTGCTCCTACTTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAgc                                <  2:421007/140‑1 (MQ=255)
                                                                                                 cGCCAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAgcg                               >  2:792739/1‑140 (MQ=255)
                                                                                                    cAGTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCgg                            <  1:728919/140‑1 (MQ=255)
                                                                                                    cAGTTCGTGCTGGGCACATTGAATATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGAGCgg                            <  2:349126/140‑1 (MQ=255)
                                                                                                      gTTCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCGGCt                          >  2:28958/1‑140 (MQ=255)
                                                                                                       ttCGTGCTGGGCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCGGCtt                         >  2:62093/1‑140 (MQ=255)
                                                                                                               gggCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCGGCTTCTACAGcc                 <  2:65490/140‑1 (MQ=255)
                                                                                                                 gCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCGGCTTCTACAGCctg               >  1:510998/1‑140 (MQ=255)
                                                                                                                 gCACGTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCGGCTTCTACAGCctg               >  2:150760/1‑140 (MQ=255)
                                                                                                                     gTTGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCGGCTTCTACAGCCTGCTgg           >  2:175431/1‑140 (MQ=255)
                                                                                                                       tGATTATTCCGCTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCGGCTTCTACAGCCTGCTGgcg         <  2:510998/140‑1 (MQ=255)
                                                                                                                              tCCGCTTGCCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCGGCTTCTACAGCCTGCTGGCGCAGTATc  <  2:865274/140‑1 (MQ=255)
                                                                                                                                  |                                                                                                                                       
GATGAATAACTGGACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGTTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCGGCTTCTACAGCCTGCTGGCGCAGTATC  >  NC_000913/330407‑330672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: