Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	691,798	T→G	intergenic (‑14/+76)	ybeX ← / ← ybeY	CorC‑HlyC family protein YbeX/endoribonuclease YbeY

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	691,798	0	T	G	100.0%	98.1 / NA	28	intergenic (‑14/+76)	ybeX/ybeY	CorC‑HlyC family protein YbeX/endoribonuclease YbeY
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (17/11);  total (17/11)

ATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTC‑TCGGCAATGTACGGATCCTCATAGCCCAGAG  >  NC_000913/691663‑691914                                                                                                                                        |                                                                                                                      aTCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGGGTGAATTGTCGTCGATCATGGGGTCGTATGGGGtctc                                                                                                                   >  1:374102/1‑140 (MQ=255)    aGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTCTGAATTGCCGTCGCTCATGGCGTCGTATGGGGTCTCATg                                                                                                                >  2:318949/1‑140 (MQ=255)           gcagTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATCGGGTCTCATgttagtta                                                                                                         >  2:685630/1‑140 (MQ=255)                             tCGGTTCACCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTa                                                                                       <  1:188837/140‑1 (MQ=255)                                                ttGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGGCg                                                                    >  1:471937/1‑140 (MQ=255)                                                  ggCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTc                                                                  >  1:647645/1‑140 (MQ=255)                                                         tAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGt                                                           >  2:561398/1‑140 (MQ=255)                                                            cAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCaa                                                        <  1:636733/140‑1 (MQ=255)                                                                    aaaaTCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTgg                                                <  2:810489/140‑1 (MQ=255)                                                                     aaaTCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATTACCAACGACGGAGGTGGCTGCGAGTCAAATGCCTGGc                                               >  1:265985/1‑140 (MQ=255)                                                                      aaTCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCa                                              <  1:561398/140‑1 (MQ=255)                                                                       aTCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGAGGTCTGCCCGGCAAATGCCTGGcca                                             >  2:858087/1‑138 (MQ=255)                                                                                    gCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGGAGGCTTCCTGTCGAATTGCTTGTAAAGTAttctttttt                                >  1:396356/1‑137 (MQ=255)                                                                                      ttATCGTGTCACTACTGTGTGAATTGTCGTCGCTCTTGGTGTCGTATGCGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTC‑TCgg                             <  2:265985/140‑1 (MQ=255)                                                                                      ttATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTC‑TCgg                             <  2:647645/140‑1 (MQ=255)                                                                                      gacaggtgtCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTC‑TCgg                             <  1:732874/135‑1 (MQ=255)                                                                                        agacagtCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTC‑TCGGCa                           <  1:560436/135‑1 (MQ=255)                                                                                        aTCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGGCGTCTGCCCGTCAAAAGCCTGGCAAATTATTCTTTT‑TCGGcc                           >  2:441328/1‑139 (MQ=255)                                                                                           gtgtCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTC‑TCGGCAATg                        <  1:441328/140‑1 (MQ=255)                                                                                             gtCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTC‑TCGGCAATGTa                      <  1:513153/140‑1 (MQ=255)                                                                                                acgactGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTC‑TCGGCAATGTACgg                   >  2:554367/4‑140 (MQ=255)                                                                                                      gtgtgAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGGCGTCTGTTAGTCAAATGCCTGGCAAAATATTCTTTC‑TCGGCAATGTACGGATCCTc             >  1:116442/1‑140 (MQ=255)                                                                                                      gtgtgAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGAAGCCTGCCCCTCTAAAAGCTGGCAAATTATTCTTTT‑TCGGCGATGTACGGactgtc             >  2:732874/1‑135 (MQ=255)                                                                                                       tgtgAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGCGGTCTGCCAGCAAAATTTCCGGCAAATTATTCCTTCTTCGGC‑ACGTACGGATCCTCa            >  2:755507/1‑140 (MQ=255)                                                                                                       tgtgAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAAATATTTTTTC‑TCGGCAATGGACGGATCCTcc            >  2:513153/1‑139 (MQ=255)                                                                                                       tgtgAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGGCTGCCAGTCAAATGCCTGGCAAATTATTCTTTC‑TCGGCAATGTACGGATCCTCa            >  1:489262/1‑140 (MQ=255)                                                                                                         tgAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGGCGTCTGCCAGTCAAAAGCCTGGCAAATTATTTTTTC‑TCGGCCATGTACGGGTCCtggct          >  2:560436/1‑136 (MQ=255)                                                                                                         tgAATTGTCGTCGCTCATGGCGTCGTATGGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTC‑TCGGCAATGTACGGATCCCCATa          >  1:16242/1‑140 (MQ=255)                                                                                                                 cgtcgCTCATGGCGTCGTATCGGGTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTC‑TCGGCAATGTACGGATCCTCATAGCCCagag  <  1:685630/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                      ATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTC‑TCGGCAATGTACGGATCCTCATAGCCCAGAG  >  NC_000913/691663‑691914

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑