| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 189,159 | A→G | G116G (GGT→GGC) | map ← | methionine aminopeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 189,159 | 0 | A | G | 95.3% | 137.7 / NA | 43 | G116G (GGT→GGC) | map | methionine aminopeptidase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (18/23); minor base C (1/1); total (19/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTGCTTCGACAAATTTCTGAATCGCCGCACCGATTTCGCGCAGATTAATGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTACCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCGTGGCACACCACTTCATTAA > NC_000913/189029‑189289 | cTGCTTCGACAAATTTCTGAATCGCCGCACCGATTTCGCGCAGATTAATGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATa > 2:746546/1‑140 (MQ=255) tGCTTCGACAAATTTCTGAATCGCCGCACCGATTTCGCGCAGATTAATGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATaa > 1:599060/1‑140 (MQ=255) gCTTCGACAAATTTCTGAATCGCCGCACCGATTTCGCGCAGATTAATGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATaaa < 2:428242/140‑1 (MQ=255) tCGACAAATTTCTGAATCGCCGCACCGATTTCGCGCAGATTAATGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACAt < 1:124180/140‑1 (MQ=255) tttCTGAATCGCCGCACCGATTTCGCGCAGATTAATGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAgg < 2:780865/140‑1 (MQ=255) gAATCGCCGCACCGATTTCGCGCAGATTAATGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCg < 2:548405/140‑1 (MQ=255) aaTCGCCGCACCGATTTCGCGCAGATTAATGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGGTGGCCGGGTTGCCGACGATAAAAATTTTCGGGGTATCGc > 2:404172/1‑140 (MQ=255) gcACCGATTTCGCGCAGATTAATGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCAGGATGGTCGACTTCCCGTCGATAAACTTTTTCGAGGTATCGCCGTGGaa > 2:286612/1‑140 (MQ=255) cACCGATTTCGCGCAGATTAATGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGaaa < 2:32577/140‑1 (MQ=255) cAGATTAATGCCTGGTTTTACCCTGTGTATCGCCAGGCACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTa < 1:286612/140‑1 (MQ=255) ttAATGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGt < 2:204122/140‑1 (MQ=255) aTGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGAt > 2:733055/1‑131 (MQ=255) aTGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGAt < 1:733055/131‑1 (MQ=255) tGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACa < 1:746546/140‑1 (MQ=255) ggTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAAt > 1:118343/1‑140 (MQ=255) ggTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAAt > 2:604123/1‑140 (MQ=255) ggTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAAt > 1:20672/1‑140 (MQ=255) ttttACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTATCGAGGTAGCGCGGTGCAAACCATCATTGAGTACGGTGACATCAATGt > 2:240894/1‑140 (MQ=255) ccATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACg > 1:101607/1‑140 (MQ=255) ggTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTc > 2:207651/1‑140 (MQ=255) tACAGGCTTTCTTGCGTGATGCTGCACAGACCTCCCCCCGTGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTcag < 2:373265/140‑1 (MQ=255) tACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTcag < 1:816286/140‑1 (MQ=255) tACAGGCTTTCTTGCATGATGCTGCTCAGCCGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTcag < 1:404172/140‑1 (MQ=255) gCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCt > 2:537346/1‑140 (MQ=255) gCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCt < 1:728114/140‑1 (MQ=255) cTTGCGTGATGCGGCCCAGACGCTCCCCCCTGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCa < 1:223425/140‑1 (MQ=255) cTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCa > 2:483707/1‑140 (MQ=255) cTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATGACGGTGACATCAGTGTGAACGATATCGCCAGCTTTCAGCAGCTTAGCa > 2:277498/1‑140 (MQ=255) tGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATc < 1:537346/140‑1 (MQ=255) tGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATc < 1:207651/140‑1 (MQ=255) gATGCGGCACAGACGTTCGCCCTTGTTGGTCGGCTTGTCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCg < 1:277498/140‑1 (MQ=255) gATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCg > 2:111339/1‑140 (MQ=255) acaGACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCg < 1:604123/140‑1 (MQ=255) gACGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCGTgg < 2:599060/140‑1 (MQ=255) aCGTTCGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCGTGGc > 2:539886/1‑140 (MQ=255) ttCGCCCATGATGGTCGGCTTGCCGCCGATAAACATTCTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCGTGGcaca < 1:240894/140‑1 (MQ=255) cGCCCATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCGTGGCAcacc > 1:724587/1‑140 (MQ=255) cccATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCGTGGCAcaccac < 1:539886/140‑1 (MQ=255) cccATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCGTGGCAcaccac < 2:528614/140‑1 (MQ=255) cccATGATGGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCGTGGCAcaccac < 2:20672/140‑1 (MQ=255) cccATGATGGTCGGCTTCCCGAGGATAAACAGTTTAGAGATATCGCCGAGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCGTGGCAcaccac < 2:278475/140‑1 (MQ=255) atgatgGTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCGTGGCACACCACTTc > 2:711435/1‑140 (MQ=255) ggTCGGCTTGCCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCGTGGCACACCACTTCATTaa > 2:560321/1‑140 (MQ=255) | CTGCTTCGACAAATTTCTGAATCGCCGCACCGATTTCGCGCAGATTAATGCCTGGTTTTACCATGCGTAGCGCCAGGTACAGGCTTTCTTGCGTGATGCGGCACAGACGTTCGCCCATGATGGTCGGCTTACCGACGATAAACATTTTCGAGGTATCGCCGTGGAAACCATCTTTGATTACGGTGACATCAATGTTAACGATATCGCCATCTTTCAGCAGCTTAGCATCGTCCGGGATACCGTGGCACACCACTTCATTAA > NC_000913/189029‑189289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |