| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,949,993 | (T)5→6 | coding (752/1332 nt) | argA → | N‑acetylglutamate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,949,988 | 1 | . | T | 95.6% | 379.9 / 6.6 | 114 | coding (747/1332 nt) | argA | N‑acetylglutamate synthase |
| Reads supporting (aligned to +/- strand): ref base . (2/3); new base T (58/51); total (60/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 125 total aligned reads displayed.
AAAGATGATTGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑T‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAG > NC_000913/2949850‑2950122 | aaaGATGATTGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑t > 1:1092959/1‑140 (MQ=255) ttGGTTTTTGCTCTTACCAGGGCGTAACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑t‑tt‑t‑ttgcg < 1:577202/140‑5 (MQ=255) tGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑t‑tt‑t‑ttgcg > 1:1465267/1‑135 (MQ=255) tGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑t‑tt‑t‑ttgcg < 2:1465267/139‑5 (MQ=255) ggTTTTTGCTCTTCCTAGGGCGGCACTAATGACGACGATGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTg < 1:839846/140‑1 (MQ=255) gTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑t‑tt‑t‑ttgcg > 1:417291/1‑133 (MQ=255) gTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑t‑tt‑t‑ttgcg < 2:417291/137‑5 (MQ=255) ttttGCTCTTCCCAGTGCGTCACTAATGATGACGGTGCTATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGgcg < 1:610172/140‑1 (MQ=255) ttttGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGgcg < 1:1165926/140‑1 (MQ=255) ttttGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGgcg < 2:212370/140‑1 (MQ=255) ttttGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGgcg < 2:145346/140‑1 (MQ=255) ttttGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGgcg < 2:17679/140‑1 (MQ=255) tttGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑t‑tt‑t‑ttgcg > 1:237829/1‑130 (MQ=255) ctctTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGCAAGGCGATCACAACTCAGGTACGGTTCG‑C‑TATT‑T‑TGCGTGGCACAGTg > 2:577202/1‑140 (MQ=255) ttCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGCAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGaaa > 2:1802278/1‑140 (MQ=255) ccAGGGCGTCACTAAGGACGACAGTCATAGTGTCTCCCAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGcc < 1:929443/140‑1 (MQ=255) ggCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGcc > 1:453717/1‑140 (MQ=255) ggCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGcc > 2:1298233/1‑140 (MQ=255) ggCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGcc > 2:1170924/1‑140 (MQ=255) tCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAg > 1:8069/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCTAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 2:1820468/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGTTGCGCC‑T‑TT‑T‑TGCGTGTCGCAGTGAAAGCCTGCCGCAgc > 2:855005/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGcc < 2:1497726/131‑1 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGcc > 1:1497726/1‑131 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 2:769206/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 1:1800619/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 1:1784807/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 2:200329/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 1:1708648/1‑140 (MQ=255) gacgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTc > 2:1748717/1‑140 (MQ=255) acgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCg > 2:1264026/1‑140 (MQ=255) acgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCg > 2:313784/1‑140 (MQ=255) acgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCg < 1:1107063/140‑1 (MQ=255) acgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCg > 2:1738986/1‑140 (MQ=255) ggTGATATTGTCTCCTAACTTTTCCGTAACGAAGCGCTAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCt < 1:855005/140‑1 (MQ=255) ggTGATATTGTCTCCGTGCTTTTCCCTAACGTACCTCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCt < 2:836697/140‑1 (MQ=255) ggTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCt < 2:10104/140‑1 (MQ=255) ggTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCt < 2:1523395/140‑1 (MQ=255) tGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGt < 1:313784/140‑1 (MQ=255) tGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGt > 1:1475692/1‑140 (MQ=255) tGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGt < 1:1264026/140‑1 (MQ=255) tctcCGAACTTTTCCCTGACGAAGCGCAAGCACGGATAGTAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAAt < 2:491701/140‑1 (MQ=255) tctcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGGGAACGCCTGCCGCAGCAGCGTGCGTCGCTGTCATTTAAt > 2:760722/1‑140 (MQ=255) ctcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATc > 1:1698860/1‑140 (MQ=255) ctcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATc > 2:1080005/1‑140 (MQ=255) ctcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATc < 1:1597728/140‑1 (MQ=255) ctcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATc > 2:1597728/1‑140 (MQ=255) tcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCa > 2:1529087/1‑140 (MQ=255) tcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCa > 1:1157755/1‑140 (MQ=255) ccGAACTTTTCCCTAACTAAGCACAAGCGCGTGTATAAGCCCAGGAAGTGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAg < 2:555680/140‑1 (MQ=255) ccGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAg < 2:1369739/140‑1 (MQ=255) ccGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAg < 1:200329/140‑1 (MQ=255) cGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGt > 1:1431525/1‑140 (MQ=255) gAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGtt < 1:1080005/140‑1 (MQ=255) aaCTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAg > 2:215565/1‑137 (MQ=255) aaCTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAg < 1:215565/137‑1 (MQ=255) tttCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCTTCGCTGTCAGTTAATCAGTTATCAg > 1:842931/1‑140 (MQ=255) tttCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCAGTTAATCAGTTATCAg > 1:491701/1‑140 (MQ=255) ttCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGAAGCGGCGGGCGGCGTTGTCATGTAATCAGTTATCAgg > 1:555680/1‑140 (MQ=255) tCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAg < 2:1738881/131‑1 (MQ=255) aCGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATgg > 2:1744108/1‑140 (MQ=255) cGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgc > 1:1250413/1‑140 (MQ=255) aagcgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgc < 1:174661/140‑1 (MQ=255) gcgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcgc < 2:8069/140‑1 (MQ=255) gcgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcgc < 1:12222/140‑1 (MQ=255) gcgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcgc < 2:453717/140‑1 (MQ=255) gcgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcgc < 1:769206/140‑1 (MQ=255) gcgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcgc < 1:1529087/140‑1 (MQ=255) gcgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGGCGCTGTCATTTTATGAGTTATTAGGAAGATGgcgcgc > 1:513318/1‑140 (MQ=255) cgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCt < 1:1748717/140‑1 (MQ=255) cgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCt < 1:1915861/140‑1 (MQ=255) agcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTg < 1:1738986/140‑1 (MQ=255) gcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGCTGGCGCGCTGTTGc < 2:1157755/140‑1 (MQ=255) ggTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAagag < 1:1170924/140‑1 (MQ=255) gCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTGTCAAGAAGATGGAGCGCTGTTGCAAGAGTTGTtct > 2:717290/1‑140 (MQ=255) ccAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCa > 1:1388942/1‑140 (MQ=255) cAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCa < 1:1129891/126‑1 (MQ=255) aGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATTAGGAAGAGGGCTCGATGTTGCTAGAGTTGTTCTCAcg > 1:801883/1‑140 (MQ=255) aGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCAcg < 2:1784807/140‑1 (MQ=255) aGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTAAATCAGTTATCAGGGAGATGGCGCGGTGTTACAAGAGTTTTTCTCAcg > 2:873185/1‑140 (MQ=255) ggAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCCGGAAGATGGCGAGCAGTTGCATGAGTTGTTCTCAcgc > 1:868026/1‑140 (MQ=255) ggAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGTAAGAGTTGTTCTCAcgc > 2:1903077/1‑140 (MQ=255) aaGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGa < 1:1744108/140‑1 (MQ=255) aaGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGa < 1:1332823/140‑1 (MQ=255) agaAAGACGATTACAACTCAGGTACGATGCG‑C‑T‑TTGT‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGCCCTCACGCGACgg < 2:1917699/140‑1 (MQ=255) aaaGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGTAAGAGTTGTTCTCACGCGACGGTa < 1:1903077/140‑1 (MQ=255) cGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGt < 2:1092959/140‑1 (MQ=255) ttACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAGGATGGCGCACTGGTGCCAGAGTTGTTCTCAGGCGACGGTATCGGTACg > 2:572449/1‑140 (MQ=255) ttACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACg > 2:1791341/1‑140 (MQ=255) tACAACTCCGGTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGc < 2:1708648/140‑1 (MQ=255) aaCTCCGGTACGGTGGG‑CTT‑TT‑T‑TGTGTGTCGCAGTGCAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 1:717290/140‑1 (MQ=255) aaCTCCGGTACGGTGAG‑C‑T‑TT‑TCTGCGTGCCGCAGTGCAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 1:572449/140‑1 (MQ=255) ggTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGTTGTTGCAATAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGa > 2:789603/1‑140 (MQ=255) gTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGAt > 2:626987/1‑140 (MQ=255) gTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGAt > 1:1203871/1‑140 (MQ=255) gTACGGTGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGCTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGAt > 2:1440265/1‑140 (MQ=255) tGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAg > 1:1360850/1‑140 (MQ=255) tGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAg > 1:1447401/1‑140 (MQ=255) tGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAg > 2:233390/1‑140 (MQ=255) tGCG‑CTT‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAg > 1:1253793/1‑140 (MQ=255) | AAAGATGATTGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑T‑TT‑T‑TGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAG > NC_000913/2949850‑2950122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |