| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,350,184 | (C)7→8 | coding (276/654 nt) | elbB ← | low activity glyoxalase ElbB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,350,177 | 1 | . | C | 87.6% | 288.0 / 28.7 | 89 | coding (283/654 nt) | elbB | low activity glyoxalase ElbB |
| Reads supporting (aligned to +/- strand): ref base . (7/4); new base C (40/38); total (47/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCCGGGGCAATACACATAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑CCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGCCAGTTAAATGG > NC_000913/3350043‑3350310 | cGCCGGGGCAATACACATAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑ccc‑c‑c < 2:75810/140‑1 (MQ=255) ccGGGGCAATACACATAAAACCAAGCGGTTTTCCGTCCTGATGCATCGGTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑AGTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑ccc‑c‑c‑c‑c < 2:697841/140‑1 (MQ=255) gggCAATACACATAAAACCAAGCGGTTTTCCCGCCCGATCCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑ccc‑c‑c‑c‑ccgg < 2:680659/140‑4 (MQ=255) ggCAATACACATAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑ccc‑c‑c‑c‑ccggc < 1:1264770/140‑5 (MQ=255) gCAATACACATAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCATGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑cc > 1:1097853/1‑130 (MQ=255) gCAATACACATAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCATGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑cc < 2:1097853/130‑1 (MQ=255) cAATACACATAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑ccc‑c‑c‑c‑c < 2:1749256/134‑1 (MQ=255) cAATACACATAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑ccc‑c‑c‑c‑c > 1:1749256/1‑134 (MQ=255) aaTACACATAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGGGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑CA‑CCCAC‑C‑C‑CAGcaca > 1:298550/1‑140 (MQ=255) tACACATAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAAt > 2:1118635/1‑140 (MQ=255) tACACATAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCATCGACGAGCCA‑AATCCC‑C‑C‑C‑CGGCACAAt > 1:876988/1‑140 (MQ=255) aTAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAAcc > 1:437767/1‑139 (MQ=255) aTAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAAATCTTCGCAGCGCCA‑TA‑CCC‑C‑CGC‑CGGCACAATCAACg > 1:648602/1‑140 (MQ=255) aCCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATcc > 1:1618863/1‑140 (MQ=255) aCCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATcc > 1:1709513/1‑140 (MQ=255) gCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGcac > 2:1565456/1‑122 (MQ=255) gCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGcac < 1:1565456/122‑1 (MQ=255) gCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAAc > 2:1684434/1‑129 (MQ=255) gCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAAc < 1:1684434/129‑1 (MQ=255) gCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTc > 1:1876783/1‑140 (MQ=255) gCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTc > 2:778983/1‑140 (MQ=255) gCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCATTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAAc > 2:287547/1‑129 (MQ=255) gCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCATTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAAc < 1:287547/129‑1 (MQ=255) cGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑CCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAg < 2:1416839/140‑1 (MQ=255) ggttccccGGCCTGACGCAACGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCCCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGGATCCAGTTCAg < 2:1911887/134‑1 (MQ=255) ggTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAg < 2:212269/140‑1 (MQ=255) ggTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAg < 2:1876783/140‑1 (MQ=255) gacagcTGATGCATCACTTGTGTCATCGCTTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCAt < 1:880833/135‑1 (MQ=255) ccGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCAt < 2:953345/140‑1 (MQ=255) ccTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGc < 2:1251670/140‑1 (MQ=255) ccTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGc < 2:1421455/140‑1 (MQ=255) ccTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGc > 1:1831155/1‑140 (MQ=255) cTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGcc < 2:439283/140‑1 (MQ=255) cTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGcc < 1:168817/140‑1 (MQ=255) cTGAAGCCTCGCTTGTGCCCGGGCCTTTAAATCCCCGTCAACGGTGCAATCCGCT‑CCCAGAACGGCCAAATTGCTTAAATTCTTCCCCGCCCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGcc < 2:437767/140‑1 (MQ=255) tGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCACAC‑CCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCt > 2:1401675/1‑140 (MQ=255) aTGCATCGCTTGTGCTAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTgg > 2:1515312/1‑140 (MQ=255) aTGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCGACGGATACAGTTCGGCGGCATCGGCCTgg > 1:501150/1‑140 (MQ=255) aTGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGACACAATCAACGTATACAGTTCTGCGGCATCGGCCTgg > 1:796467/1‑140 (MQ=255) aTCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCa < 1:778983/140‑1 (MQ=255) cGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCaca > 2:1534363/1‑138 (MQ=255) cGCTTGTGCCAGCGCCTGTAATGCACGGTCACCGGGGC‑AGTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCaga < 2:648602/140‑1 (MQ=255) gCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑CCC‑C‑C‑CACGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCagag > 2:1175718/1‑140 (MQ=255) cTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAgg < 2:1709513/140‑1 (MQ=255) cTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑CCC‑C‑C‑CGCGGCACAATCAACGCAACCAGTTCAGCGGCTCCGGCCTGGGCCAGAgg > 2:846056/1‑140 (MQ=255) cTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑CCC‑C‑C‑CGCGGCACAAGCAACGCAGCCAGTTCAGCGGCTCCGGCCTGTGccctgtc > 2:880833/1‑135 (MQ=255) tgCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAgg > 1:1036396/1‑136 (MQ=255) tgCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAgg < 2:1036396/136‑1 (MQ=255) ccAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGAt > 2:64438/1‑140 (MQ=255) cgcCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCGAGTACAGAGGCATCGGCCTGGGCCAGAGGACGGATTTCa > 2:551768/1‑140 (MQ=255) cgcCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTAAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCa > 2:1455117/1‑140 (MQ=255) ccTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCAcc < 2:1831155/140‑1 (MQ=255) ccTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑CCC‑C‑C‑CACGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCAcc < 1:1175718/140‑1 (MQ=255) ccTTTAATTCACGGTCAACGGTGC‑ACTCGCTACCAAGTCTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCAcc < 1:724323/140‑1 (MQ=255) cTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACcg < 2:1618863/140‑1 (MQ=255) tCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTg < 1:1618711/140‑1 (MQ=255) aaCGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCGTGGGCCAGAGGACGGAGTTCAGCGCGCGTTATTCGTGcc > 2:513797/1‑140 (MQ=255) aCGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCg > 1:1721062/1‑140 (MQ=255) cGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGc > 1:1844672/1‑140 (MQ=255) ggTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCt < 2:1207080/140‑1 (MQ=255) ggTGC‑ATTCGCTACCAAGACTGCCAGAATTGCTTAAAGTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCt < 1:846056/140‑1 (MQ=255) gTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCACCGGCCTGGACCAAAGGTCGGATTTCTCCGCACGTTATTCGTGCCGCtt > 2:685336/1‑140 (MQ=255) tGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATGGGCCTGGGGCAGGGGATGGATTTCAACGCGGGTTATTCGTGCCGCTTc > 2:566991/1‑140 (MQ=255) aTTCGCTACCAAGACTGTCAAACTTGCTTAACTTCTTCGTCGCGCCA‑AT‑CCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATc < 2:520957/140‑1 (MQ=255) aTTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCACTTCAAt > 2:340538/1‑140 (MQ=255) aTTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑CCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGAACGGATTGCACGGCGCGTTATACGTGCCGCTTCAATc > 1:520957/1‑140 (MQ=255) tCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTc < 2:15790/135‑1 (MQ=255) tCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTc > 1:15790/1‑135 (MQ=255) cGCTACCAAGACTGGCAAAATTTCTAAAACTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAg < 1:846732/140‑1 (MQ=255) gCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCCCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGc > 1:1388731/1‑140 (MQ=255) aGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTgc > 2:81626/1‑140 (MQ=255) ggCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGcaca < 1:127029/131‑1 (MQ=255) ggCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGcaca > 2:127029/1‑131 (MQ=255) ggCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGtt < 2:1721062/140‑1 (MQ=255) cAAAATTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTc > 2:1036064/1‑140 (MQ=255) cAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑CCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGGTATTCGTACCGCTTTAATCAGCACATTGCGCGTTTcc > 1:686840/1‑140 (MQ=255) atcgCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTc < 2:1155382/137‑1 (MQ=255) aTTGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTc < 2:1844672/140‑1 (MQ=255) ttGCTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATGCGTGCCGCTTCTATGAGCACAGTGCGCGTTTCCGTCa > 1:493654/1‑140 (MQ=255) cTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTc < 2:338305/136‑1 (MQ=255) cTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTc > 1:338305/1‑136 (MQ=255) cTTAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCg > 1:1913136/1‑140 (MQ=255) ttAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGc > 2:1562511/1‑140 (MQ=255) tAAATTCTTCGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCt > 2:1635362/1‑140 (MQ=255) aTTCTTCGCCGCGCCC‑AA‑CCC‑CTC‑C‑AGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCg < 1:685336/140‑1 (MQ=255) ttcttcGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGc < 2:1913136/140‑1 (MQ=255) tcttcGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGcc < 1:1515312/140‑1 (MQ=255) tcGCCGCGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGCCAGt > 2:1620500/1‑140 (MQ=255) cgccgcGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGc < 2:468871/135‑1 (MQ=255) cgccgcGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGc > 1:468871/1‑135 (MQ=255) cgccgcGCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGCCAGtt < 2:249695/140‑1 (MQ=255) gccgcGCCA‑AACCCC‑C‑C‑C‑CGGCACACTCATCGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGCCAGTTa < 1:710964/140‑1 (MQ=255) cgcgCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCGGCTTCAATTAGCCCCTGGCGCGTTTACGTCAGCGCTTCGTCAGTTaaa > 2:836273/1‑140 (MQ=255) cgcgCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGCCAGTTaaa < 1:1401675/140‑1 (MQ=255) cgcgCCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGCCAGTTaaa > 1:238929/1‑140 (MQ=255) cgcCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGCCAGTTAAATg > 1:25104/1‑140 (MQ=255) cgcCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTCCCGTCATCGATTCGCCAGTTAAATg > 1:760608/1‑140 (MQ=255) cgcCA‑AACCCC‑C‑C‑C‑CAGCACAATCACCGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGCCAGTTAAATg < 1:566991/140‑1 (MQ=255) gcCA‑AACCCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGCCAGTTAAATgg < 1:1455117/140‑1 (MQ=255) | CGCCGGGGCAATACACATAAAACCAAGCGGTTTTCCGGCCTGATGCATCGCTTGTGCCAGCGCCTTTAATTCACGGTCAACGGTGC‑ATTCGCTACCAAGACTGGCAAAATTGCTTAAATTCTTCGCCGCGCCA‑AA‑CCC‑C‑C‑C‑CGGCACAATCAACGCATCCAGTTCAGCGGCATCGGCCTGGGCCAGAGGACGGATTTCACCGCGCGTTATTCGTGCCGCTTCAATCAGCACATTGCGCGTTTCCGTCATCGCTTCGCCAGTTAAATGG > NC_000913/3350043‑3350310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |