| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,165,892 | (T)6→7 | intergenic (+207/‑193) | ycfP → / → ndh | UPF0227 protein YcfP/NADH:quinone oxidoreductase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,165,886 | 1 | . | T | 96.2% | 346.5 / 4.0 | 106 | intergenic (+201/‑199) | ycfP/ndh | UPF0227 protein YcfP/NADH:quinone oxidoreductase II |
| Reads supporting (aligned to +/- strand): ref base . (1/3); new base T (46/55); total (48/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
CCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTG‑TTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGT > NC_000913/1165757‑1166018 | ccACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTG‑ttt‑ttttgat < 1:1895623/140‑5 (MQ=255)ccACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTG‑ttt‑ttttgat < 1:993305/140‑5 (MQ=255)ccACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATACGCTCAAATAATAATCAATAATCTCTG‑ttt‑ttttgat > 1:864333/1‑136 (MQ=255)ccACGCCGCATCCGACAGTCGACCACCAAAGCCTGATTCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCGCTCTCACAAATTCGCTCAAATAATAAACAATAAACACTG‑ttt‑ttttgat < 1:529122/140‑5 (MQ=255) cACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTG‑ttt‑ttttgatc < 2:741765/140‑6 (MQ=255) cACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACACTCACAAACTCGGTCAGATAATAAACAATACACTCTG‑ttt‑ttttgatc > 2:710056/1‑135 (MQ=255) cgccgcATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGAtctc < 1:940070/140‑1 (MQ=255) gccgcATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCa < 1:936047/140‑1 (MQ=255) cgcATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCAcc > 1:997106/1‑140 (MQ=255) ccGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTa < 2:372136/140‑1 (MQ=255) aCAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAg > 2:1199914/1‑140 (MQ=255) aCAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAg > 2:783056/1‑140 (MQ=255) gTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCg < 1:1006144/140‑1 (MQ=255) gTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCg < 1:407734/140‑1 (MQ=255) gAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCt < 1:1514085/140‑1 (MQ=255) aGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTa > 2:1675472/1‑140 (MQ=255) aGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAAGAAACTCTGATTT‑TTTGATCTCTACCGGTAAAGTCGCCTa > 2:919229/1‑140 (MQ=255) aTGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTAACTTTTc > 1:1144830/1‑140 (MQ=255) tGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGcaa < 1:1451215/140‑1 (MQ=255) aTGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTAACTTTTCAGcaaca > 2:88473/1‑140 (MQ=255) aTGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTC‑AATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGc > 2:352806/1‑135 (MQ=255) aTGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTC‑AATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGc < 1:352806/135‑1 (MQ=255) tGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGcaacaa < 2:389816/140‑1 (MQ=255) tGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGcaacaa > 2:206477/1‑140 (MQ=255) tGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGcaacaa > 2:70689/1‑140 (MQ=255) tGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGcaacaa > 1:389816/1‑140 (MQ=255) ttATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTAACTTTTCAGCAACAAAACTTGAt < 2:1144830/140‑1 (MQ=255) tATCAGGCCTACCGAACGCCCTGCATACACCCCTCCCTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGAtt < 2:1484901/140‑1 (MQ=255) cAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAAc < 1:1143586/140‑1 (MQ=255) cAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAAc < 2:1423429/140‑1 (MQ=255) ggCCTACCGAACGCCTTGCATACACGCCTTACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACAt < 1:810481/140‑1 (MQ=255) ggCCTACCGAACGCCCTGCATACACTCCTCACTCTATCTCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACAt < 1:710056/140‑1 (MQ=255) ggCCTACCGAACGCCCTACATAAACCCCTCATTCTCTATAACTCTCACCAATTCGCTCAAATAATAAACAATAAGCTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACAt < 2:572944/140‑1 (MQ=255) gCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATc > 1:219365/1‑140 (MQ=255) gCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATc > 2:18905/1‑140 (MQ=255) gCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATc > 1:1667160/1‑140 (MQ=255) cTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCAGCCGGTAAAGTCGCCTATCTTTTCAGTAACAGAACTTGATTAACATCaa > 2:626414/1‑140 (MQ=255) cTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCaa > 1:1073819/1‑140 (MQ=255) aCCGAACGCCCTGCATACACCCTTCCCTCCATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAAtt < 1:532760/140‑1 (MQ=255) aCCGAACGCCCTGCATACACCCCTCACTCTATATCTCTCTCACAACTTCGCTCAAATAATCAACAACAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAAtt < 2:149252/140‑1 (MQ=255) ccGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAAttt > 2:10390/1‑140 (MQ=255) ccGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAAttt > 2:1358364/1‑140 (MQ=255) aCGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGt < 2:1667160/140‑1 (MQ=255) cGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTa > 2:1050652/1‑140 (MQ=255) cGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTa > 1:26152/1‑140 (MQ=255) gCCCTGCATACACCCCTCTCTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTAt < 2:1902833/140‑1 (MQ=255) gCCCTGCATACACCCCTCACTCTATATCATTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTAt < 1:626414/140‑1 (MQ=255) cTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGAc < 1:18905/140‑1 (MQ=255) cTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGAc < 1:335539/140‑1 (MQ=255) tGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGAcc > 1:1116230/1‑140 (MQ=255) tACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATg < 1:1662521/140‑1 (MQ=255) tACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATg < 2:219365/140‑1 (MQ=255) cacCCCTCTCTCTATATCACTCCCACAAATTTGCTTAAAGAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCa < 2:864333/140‑1 (MQ=255) cacCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCa < 2:1267403/140‑1 (MQ=255) acCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATGAATTTTGGTATGACCAATGCAc > 1:764561/1‑140 (MQ=255) acCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCAc > 2:940485/1‑140 (MQ=255) acCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCAc < 2:1395514/140‑1 (MQ=255) acCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCAc > 2:197463/1‑140 (MQ=255) ccTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGAc < 1:992242/129‑1 (MQ=255) ccTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGAc > 2:992242/1‑129 (MQ=255) ccTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCAt > 2:462698/1‑140 (MQ=255) ccTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCAt < 1:1479658/140‑1 (MQ=255) ccTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCAt < 1:1199914/140‑1 (MQ=255) tCACTCTATATCACTTTCACAATTTTGCTCAAATAATTAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTc < 1:919229/140‑1 (MQ=255) tCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACCTCAATTATGGTATGACCAATGCACCATTc > 1:694776/1‑140 (MQ=255) tCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATg < 1:1013663/132‑1 (MQ=255) tCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATg > 2:1013663/1‑132 (MQ=255) tCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTc > 2:1528047/1‑140 (MQ=255) tCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTc > 1:221111/1‑140 (MQ=255) tCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTc < 1:1675472/140‑1 (MQ=255) cACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCa > 1:1023061/1‑140 (MQ=255) tatCACTCTCACAAATTTGCTCTAATAATAAACAAAAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTAtt < 2:694776/140‑1 (MQ=255) tatCACTCTCACAAAGTCGCTCGAACAATAAACAATATACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTAtt < 1:714605/140‑1 (MQ=255) tctcACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAAt > 2:188676/1‑140 (MQ=255) tctcACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAAt > 1:228241/1‑140 (MQ=255) tcACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATg > 1:7640/1‑127 (MQ=255) tcACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATg < 2:7640/127‑1 (MQ=255) acaAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCg > 2:1524170/1‑140 (MQ=255) acaAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCg > 1:1302337/1‑140 (MQ=255) acaAATTCGCTCAAATAATAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCg > 1:1816597/1‑140 (MQ=255) aataatAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAAGATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCa < 1:88473/140‑1 (MQ=255) aataatAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCa < 2:1033628/140‑1 (MQ=255) aataatAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCa < 1:1050652/140‑1 (MQ=255) aataatAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCa < 2:1073819/140‑1 (MQ=255) aataatAAACAATAAACTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCa < 1:70689/140‑1 (MQ=255) taataaACAATAAACTCCG‑TTTCTTTGATCTAACCGGGTCAAGTCGCCAATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCAtt < 2:492543/140‑1 (MQ=255) aataaacaataaacTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTg < 2:953121/140‑1 (MQ=255) aataaacaataaacTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTg < 1:197463/140‑1 (MQ=255) taaacaataaacTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCt > 2:342877/1‑140 (MQ=255) aacaataaacTCTGTTTT‑TTTGATCTCACCCGGTAAAGGCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGt < 1:206477/140‑1 (MQ=255) aataaacTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAAc < 1:940485/140‑1 (MQ=255) ataaacTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAAcc > 2:820424/1‑140 (MQ=255) taaacTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTg > 1:1523109/1‑134 (MQ=255) taaacTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTg < 2:1523109/134‑1 (MQ=255) taaacTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAAc < 1:214327/138‑1 (MQ=255) taaacTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAAc > 2:214327/1‑138 (MQ=255) aacTCTGTTTT‑TTTGCTCTCACCCGCTAATGTCGCCTCTCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCtgt < 1:554254/140‑1 (MQ=255) aacTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCa < 1:141964/126‑1 (MQ=255) aacTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCa > 2:141964/1‑126 (MQ=255) aacTCTGTTTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCtgt < 1:1858145/140‑1 (MQ=255) | CCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTG‑TTT‑TTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGT > NC_000913/1165757‑1166018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |