Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,167,058 (G)5→7 coding (974/1305 nt) ndh → NADH:quinone oxidoreductase II

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,167,0531.G96.0% 263.3 / 2.1 75coding (969/1305 nt)ndhNADH:quinone oxidoreductase II
Reads supporting (aligned to +/- strand):  ref base . (2/1);  new base G (30/42);  total (32/43)
Fisher's exact test for biased strand distribution p-value = 5.72e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*NC_0009131,167,0532.G96.0% 258.3 / 2.1 75coding (969/1305 nt)ndhNADH:quinone oxidoreductase II
Reads supporting (aligned to +/- strand):  ref base . (2/1);  new base G (30/41);  total (32/43)
Fisher's exact test for biased strand distribution p-value = 5.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCCAGACTTCCTGAAAGATATCGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑A‑‑GG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTATCAGTATAAAGATCA  >  NC_000913/1166918‑1167169
                                                                                                                                          ||                                                                                                                      
gcCAGACTTCCTGAAAGATATCGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑A‑‑gg‑‑gg                                                                                                                  <  1:1028165/140‑1 (MQ=255)
 ccAGACTTCCTGAAAGATATCGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑A‑‑gg‑‑ggg                                                                                                                 >  2:1590357/1‑140 (MQ=255)
  cAGACTTCCTGAAAGATATCGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCAATTGGCGGCTGCGCGTAATGCGCGCGTCCGGA‑‑A‑‑gg‑‑gggg                                                                                                                >  2:556212/1‑139 (MQ=255)
     aCTTCCTGAAAGATATCGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑A‑‑gg‑‑gggggct                                                                                                             <  2:1649565/140‑5 (MQ=255)
                gATATCGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTccgccg                                                                                                    <  1:134761/140‑1 (MQ=255)
                gATATCGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTccgccg                                                                                                    <  1:1590357/140‑1 (MQ=255)
                   atCGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGt                                                                                                 >  2:1356887/1‑140 (MQ=255)
                   atCGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGt                                                                                                 >  2:101276/1‑140 (MQ=255)
                     cGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGc                                                                                               <  1:101276/140‑1 (MQ=255)
                     cGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGc                                                                                               <  2:104784/140‑1 (MQ=255)
                       gtggtCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTc                                                                                             <  2:1198784/140‑1 (MQ=255)
                          gtCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAgg                                                                                          <  2:1559553/140‑1 (MQ=255)
                          gtCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAgg                                                                                          >  2:1682199/1‑140 (MQ=255)
                           tCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGc                                                                                         >  1:1111150/1‑140 (MQ=255)
                           tCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGc                                                                                         >  1:1722975/1‑140 (MQ=255)
                           tCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGGCATGCCCGGGTCAGGAGGG‑‑GG‑‑GGGCGTTGTGCCGCCGCGTGCTCAGGc                                                                                         >  2:571124/1‑140 (MQ=255)
                            cTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTccgccg                                                                                                    <  1:475304/128‑1 (MQ=255)
                            cTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTccgccg                                                                                                    >  2:475304/1‑128 (MQ=255)
                            cTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCt                                                                                        >  1:222586/1‑140 (MQ=255)
                             ttGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTg                                                                                       <  1:1210936/140‑1 (MQ=255)
                                   cTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCTGGG‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACAcc                                                                                 <  2:1710062/140‑1 (MQ=255)
                                     aaCCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAg                                                                               >  1:1546959/1‑140 (MQ=255)
                                     aaCCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAg                                                                               >  1:1071208/1‑140 (MQ=255)
                                     aaCCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAg                                                                               >  1:1151125/1‑140 (MQ=255)
                                      aCCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGa                                                                              >  1:1473279/1‑140 (MQ=255)
                                          tATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGc                                                                                         >  2:1081234/1‑125 (MQ=255)
                                          tATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGc                                                                                         <  1:1081234/125‑1 (MQ=255)
                                          tATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGc                                                                          <  1:1316495/140‑1 (MQ=255)
                                          tATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGc                                                                          <  1:1383006/140‑1 (MQ=255)
                                            tCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGATGG‑‑GG‑‑GGGCCTTGCTCCCCCGCGTGCTCAGGGTGCACACCAGATGGCGa                                                                        >  2:675347/1‑140 (MQ=255)
                                            tCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGa                                                                        <  2:1151125/140‑1 (MQ=255)
                                                  aGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTgcg                                                                  <  2:1434207/140‑1 (MQ=255)
                                                    cTGGTGGTGGAACCGCCGCTGCTAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCa                                                                <  1:556212/140‑1 (MQ=255)
                                                     tggtggtggAACCGACGCTGCACACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCaa                                                               <  1:571124/140‑1 (MQ=255)
                                                        tggtggAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGa                                                            <  2:123202/140‑1 (MQ=255)
                                                              aaCCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTgcg                                                                  >  2:1124102/1‑128 (MQ=255)
                                                              aaCCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTgcg                                                                  <  1:1124102/128‑1 (MQ=255)
                                                              aaCCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAacaaca                                                      >  2:1479487/1‑140 (MQ=255)
                                                               aCCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACAt                                                     >  1:1653025/1‑140 (MQ=255)
                                                                   aCGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGTTTATGCTGCACACCAGATTGCGACTTGCCCAATGAACAACCTTCTg                                                 >  2:175912/1‑140 (MQ=255)
                                                                    cGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTgg                                                <  2:222586/140‑1 (MQ=255)
                                                                      cTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGgcg                                              <  2:1653025/140‑1 (MQ=255)
                                                                      cTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGgcg                                              <  2:1588065/140‑1 (MQ=255)
                                                                      cTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGgcg                                              <  1:1510350/140‑1 (MQ=255)
                                                                      cTGCAAACCACCCGCGAACCAGACATTTACGTTATTGGCCACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGgcg                                              <  2:717980/140‑1 (MQ=255)
                                                                       tGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGgcgc                                             <  2:1546959/140‑1 (MQ=255)
                                                                         cAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAg                                           <  2:342274/140‑1 (MQ=255)
                                                                         cAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACAACAGGTGGTGACTTGCGGAATGGACAACATTCTGGCGCAg                                           >  2:497962/1‑140 (MQ=255)
                                                                           aaCCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGAt                                         <  1:436615/140‑1 (MQ=255)
                                                                            accaccCGCGATCCACACATTTTCGCTATCGGCGACTCCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATg                                        <  1:497962/140‑1 (MQ=255)
                                                                                 ccGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGTACGACATTCCGGCGCAGATGAACgg                                   >  1:849938/1‑140 (MQ=255)
                                                                                 ccGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGCACCACATTCGGGCGCAGATGAACgg                                   >  1:672089/1‑140 (MQ=255)
                                                                                 ccGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACgg                                   >  2:1589461/1‑140 (MQ=255)
                                                                                 ccGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACgg                                   >  1:1015077/1‑140 (MQ=255)
                                                                                 ccGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACgg                                   >  1:391237/1‑140 (MQ=255)
                                                                                 ccGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACgg                                   >  1:1721772/1‑140 (MQ=255)
                                                                                  cgcgATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGt                                  <  2:1015077/140‑1 (MQ=255)
                                                                                          aGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCt                          <  2:1071208/140‑1 (MQ=255)
                                                                                                 tACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAAt                   >  1:405902/1‑140 (MQ=255)
                                                                                                 tACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAAt                   >  1:1712468/1‑140 (MQ=255)
                                                                                                 tACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGAGGAACGGTAAGCCGCTGAAAAAt                   >  1:523428/1‑140 (MQ=255)
                                                                                                   cGCTATTGACGACTGCTGGTCATGCCCGCGTACTGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTa                 <  2:849938/140‑1 (MQ=255)
                                                                                                    gCTATTGGCGACTGCGCGTCATGCCCGCGTCCGTA‑‑A‑‑GGGAGGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                <  2:838437/140‑1 (MQ=255)
                                                                                                    gCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGTGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                <  1:1698253/140‑1 (MQ=255)
                                                                                                    gCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                <  2:391237/140‑1 (MQ=255)
                                                                                                    gCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                <  1:1556113/140‑1 (MQ=255)
                                                                                                    gCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                <  1:1589461/140‑1 (MQ=255)
                                                                                                    gCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                <  2:405902/140‑1 (MQ=255)
                                                                                                    gCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                <  1:326886/140‑1 (MQ=255)
                                                                                                    gCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                <  2:1721772/140‑1 (MQ=255)
                                                                                                    gCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                <  2:1712468/140‑1 (MQ=255)
                                                                                                    gCTATTGGCGACTGCCCGTCATTCCCGCGCCCGGA‑‑AGTGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                <  1:675347/140‑1 (MQ=255)
                                                                                                    cagaTTGGCGACTGCTCGTCATGCCTGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                <  1:890593/137‑1 (MQ=255)
                                                                                                        ttGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                <  2:1553292/136‑1 (MQ=255)
                                                                                                        ttGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTAt                >  1:1553292/1‑136 (MQ=255)
                                                                                                          ggCGACTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTATCAGtat          <  1:1682199/140‑1 (MQ=255)
                                                                                                              aCTGCGCGTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACCTTCTGGCGCAGAGGAACGGTAAGCCGCTGAAAAATTATCAGTATAAAg      >  2:751384/1‑140 (MQ=255)
                                                                                                                  cgcgTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGTACGGTAAGCCGGTGGAAAATTGTCAGTATAAAGATCa  >  1:533556/1‑140 (MQ=255)
                                                                                                                  cgcgTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCCGGCGCAGATGAACGCTCGGCCGCTGTAAAATCATCAGTATAAAGATCa  >  2:921474/1‑140 (MQ=255)
                                                                                                                  cgcgTCATGCCCGCGTCCGGA‑‑AGGGG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCCGGCGCAGAAGAAGGGTCAGCCGCTGAAAAAGTATCAGTAAAAAGactg  >  2:890593/1‑137 (MQ=255)
                                                                                                                                          ||                                                                                                                      
GCCAGACTTCCTGAAAGATATCGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGA‑‑A‑‑GG‑‑GGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTATCAGTATAAAGATCA  >  NC_000913/1166918‑1167169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑